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PI0010117 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010117
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr04:25392782..25393567
RNA-Seq ExpressionPI0010117
SyntenyPI0010117
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035005.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.5e-2745.05Show/hide
Query:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQ---------------RHQEMIPTPVARPTEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKG---PK
        MA   E EV EH+E+SDSS+S+ HWKR  KK                +    + TPV+RP EQS  P  L EEI RGKM V  KDI   +PLSKG   PK
Subjt:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQ---------------RHQEMIPTPVARPTEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKG---PK

Query:  ASLEKVKSTHAPLKISEQPLDTSRKQIAGH---------------------------------------PELRPEIATVLSGIAKIHVNNLTPLEEYLNS
        A L+K+ STHAPL+ SE PLDTS +Q   +                                       P LRP+IATVLSGI KIH + LTPLEEYLNS
Subjt:  ASLEKVKSTHAPLKISEQPLDTSRKQIAGH---------------------------------------PELRPEIATVLSGIAKIHVNNLTPLEEYLNS

Query:  YL
        YL
Subjt:  YL

KAA0050984.1 hypothetical protein E6C27_scaffold3608G00010 [Cucumis melo var. makuwa]1.2e-2553.09Show/hide
Query:  EREVKEHREKSDSSRSNRHWKRPSKKQRHQ---------------EMIP-TPVARPTEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKG---PKASLE
        E E+KEH+++S+S +S+RHWKRP KK +                 ++ P TPV++P +QS  P TLLEEI RGKM V  KDI   +P SKG   PKA L+
Subjt:  EREVKEHREKSDSSRSNRHWKRPSKKQRHQ---------------EMIP-TPVARPTEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKG---PKASLE

Query:  KVKSTHAPLKISEQPLDTSRKQIAGHPE---LRPEIATVLSGIAKIHVNNLTPLEEYLNSYL
        KV ST APLK SE  LDTS +Q   +PE   LR EI TVLS I KIH + L PLEEYLNSYL
Subjt:  KVKSTHAPLKISEQPLDTSRKQIAGHPE---LRPEIATVLSGIAKIHVNNLTPLEEYLNSYL

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]1.8e-2445.77Show/hide
Query:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQR---------------------------HQEMI-------------------------PTPVARPTEQ
        MAP  E EV EH  +SDS++S+RHWKRP KK +                           H E +                          TPV +P EQ
Subjt:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQR---------------------------HQEMI-------------------------PTPVARPTEQ

Query:  SSHPPTLLEEICRGKMKVNEKDIEN-SNPLSKGPKASLEKVKSTHAPLKISEQPLDTSRKQIAGHPE---LRPEIATVLSGIAKIHVNNLTPLEEYLNSY
        S  P TLLEEI RGKM V  KD+E+ S+     PKASL+KV S HAPLK SE PL  S KQ   +PE   LRPEIATVLSGI KIH + L  LEEYLNSY
Subjt:  SSHPPTLLEEICRGKMKVNEKDIEN-SNPLSKGPKASLEKVKSTHAPLKISEQPLDTSRKQIAGHPE---LRPEIATVLSGIAKIHVNNLTPLEEYLNSY

Query:  L
        L
Subjt:  L

KAE8648075.1 hypothetical protein Csa_018860, partial [Cucumis sativus]2.2e-3058.78Show/hide
Query:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQRHQEMIPTPVARPTEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKG--PKASLEKVKSTHAPLKIS
        MAP  E++V EH+++SD+++S+RHWKRP KK +      TP A+P + S  P  LLEEI RGKMKV  KDIEN  P   G  P  S  K  S HAPLKIS
Subjt:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQRHQEMIPTPVARPTEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKG--PKASLEKVKSTHAPLKIS

Query:  EQPLDTSRKQIAGHPE--LRPEIATVLSGIAKIHVNNLTPLEEYLNSY
        E PL TS KQ A HP+  LR EI+T+LSGIAKIH ++LTPLEEYLNSY
Subjt:  EQPLDTSRKQIAGHPE--LRPEIATVLSGIAKIHVNNLTPLEEYLNSY

TYK06433.1 hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa]4.7e-2542.86Show/hide
Query:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQR----HQEMI----------------------------PTPVARPTEQSSHPPTLLEEICRGKMKVNE
        MAP  E EVKEH+++SDSS+S+RHWKRP KK +    H +                               TPV +P EQS  P  L EEI RGKM V  
Subjt:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQR----HQEMI----------------------------PTPVARPTEQSSHPPTLLEEICRGKMKVNE

Query:  KDIE-NSNPLSKGPKASLEKVKSTHAPLKISEQPLDTSRKQIAGH---------------------------------------PELRPEIATVLSGIAK
        KD+E +S+     PKASL KV STHAPLK SE PL TS KQ   +                                       P LRPEIATVLSGI K
Subjt:  KDIE-NSNPLSKGPKASLEKVKSTHAPLKISEQPLDTSRKQIAGH---------------------------------------PELRPEIATVLSGIAK

Query:  IHVNNLTPLEEYLNSYL
        IH + LT LEEYLNSYL
Subjt:  IHVNNLTPLEEYLNSYL

TrEMBL top hitse value%identityAlignment
A0A0A0KQU9 Uncharacterized protein6.8e-3058.5Show/hide
Query:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQRHQEMIPTPVARPTEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKG--PKASLEKVKSTHAPLKIS
        MAP  E++V EH+++SD+++S+RHWKRP KK +      TP A+P + S  P  LLEEI RGKMKV  KDIEN  P   G  P  S  K  S HAPLKIS
Subjt:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQRHQEMIPTPVARPTEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKG--PKASLEKVKSTHAPLKIS

Query:  EQPLDTSRKQIAGHPE--LRPEIATVLSGIAKIHVNNLTPLEEYLNS
        E PL TS KQ A HP+  LR EI+T+LSGIAKIH ++LTPLEEYLNS
Subjt:  EQPLDTSRKQIAGHPE--LRPEIATVLSGIAKIHVNNLTPLEEYLNS

A0A5A7U6Q5 Uncharacterized protein6.0e-2653.09Show/hide
Query:  EREVKEHREKSDSSRSNRHWKRPSKKQRHQ---------------EMIP-TPVARPTEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKG---PKASLE
        E E+KEH+++S+S +S+RHWKRP KK +                 ++ P TPV++P +QS  P TLLEEI RGKM V  KDI   +P SKG   PKA L+
Subjt:  EREVKEHREKSDSSRSNRHWKRPSKKQRHQ---------------EMIP-TPVARPTEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKG---PKASLE

Query:  KVKSTHAPLKISEQPLDTSRKQIAGHPE---LRPEIATVLSGIAKIHVNNLTPLEEYLNSYL
        KV ST APLK SE  LDTS +Q   +PE   LR EI TVLS I KIH + L PLEEYLNSYL
Subjt:  KVKSTHAPLKISEQPLDTSRKQIAGHPE---LRPEIATVLSGIAKIHVNNLTPLEEYLNSYL

A0A5A7UGW6 PMD domain-containing protein8.6e-2545.77Show/hide
Query:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQR---------------------------HQEMI-------------------------PTPVARPTEQ
        MAP  E EV EH  +SDS++S+RHWKRP KK +                           H E +                          TPV +P EQ
Subjt:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQR---------------------------HQEMI-------------------------PTPVARPTEQ

Query:  SSHPPTLLEEICRGKMKVNEKDIEN-SNPLSKGPKASLEKVKSTHAPLKISEQPLDTSRKQIAGHPE---LRPEIATVLSGIAKIHVNNLTPLEEYLNSY
        S  P TLLEEI RGKM V  KD+E+ S+     PKASL+KV S HAPLK SE PL  S KQ   +PE   LRPEIATVLSGI KIH + L  LEEYLNSY
Subjt:  SSHPPTLLEEICRGKMKVNEKDIEN-SNPLSKGPKASLEKVKSTHAPLKISEQPLDTSRKQIAGHPE---LRPEIATVLSGIAKIHVNNLTPLEEYLNSY

Query:  L
        L
Subjt:  L

A0A5D3BT42 Putative mitochondrial protein3.2e-2745.05Show/hide
Query:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQ---------------RHQEMIPTPVARPTEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKG---PK
        MA   E EV EH+E+SDSS+S+ HWKR  KK                +    + TPV+RP EQS  P  L EEI RGKM V  KDI   +PLSKG   PK
Subjt:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQ---------------RHQEMIPTPVARPTEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKG---PK

Query:  ASLEKVKSTHAPLKISEQPLDTSRKQIAGH---------------------------------------PELRPEIATVLSGIAKIHVNNLTPLEEYLNS
        A L+K+ STHAPL+ SE PLDTS +Q   +                                       P LRP+IATVLSGI KIH + LTPLEEYLNS
Subjt:  ASLEKVKSTHAPLKISEQPLDTSRKQIAGH---------------------------------------PELRPEIATVLSGIAKIHVNNLTPLEEYLNS

Query:  YL
        YL
Subjt:  YL

A0A5D3C3D7 PMD domain-containing protein2.3e-2542.86Show/hide
Query:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQR----HQEMI----------------------------PTPVARPTEQSSHPPTLLEEICRGKMKVNE
        MAP  E EVKEH+++SDSS+S+RHWKRP KK +    H +                               TPV +P EQS  P  L EEI RGKM V  
Subjt:  MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQR----HQEMI----------------------------PTPVARPTEQSSHPPTLLEEICRGKMKVNE

Query:  KDIE-NSNPLSKGPKASLEKVKSTHAPLKISEQPLDTSRKQIAGH---------------------------------------PELRPEIATVLSGIAK
        KD+E +S+     PKASL KV STHAPLK SE PL TS KQ   +                                       P LRPEIATVLSGI K
Subjt:  KDIE-NSNPLSKGPKASLEKVKSTHAPLKISEQPLDTSRKQIAGH---------------------------------------PELRPEIATVLSGIAK

Query:  IHVNNLTPLEEYLNSYL
        IH + LT LEEYLNSYL
Subjt:  IHVNNLTPLEEYLNSYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCTATCCACGAGAGGGAAGTCAAGGAGCACAGAGAGAAGAGTGATAGCAGCAGAAGCAATCGTCATTGGAAGAGACCTTCGAAGAAGCAAAGGCATCAGGAGAT
GATTCCTACACCAGTTGCTAGACCAACTGAACAATCCTCACATCCTCCTACTCTTCTCGAGGAGATTTGTCGAGGCAAGATGAAGGTGAATGAAAAAGATATTGAAAATT
CAAATCCTCTGTCCAAAGGCCCCAAAGCGTCTTTAGAGAAGGTTAAATCCACGCATGCGCCTCTCAAGATTTCCGAGCAGCCTTTAGACACTTCTAGAAAGCAGATAGCA
GGACATCCTGAACTTAGACCAGAAATAGCAACGGTTCTTTCGGGAATTGCAAAGATCCATGTAAACAACCTGACTCCTCTTGAAGAATATTTGAATAGCTACCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCTATCCACGAGAGGGAAGTCAAGGAGCACAGAGAGAAGAGTGATAGCAGCAGAAGCAATCGTCATTGGAAGAGACCTTCGAAGAAGCAAAGGCATCAGGAGAT
GATTCCTACACCAGTTGCTAGACCAACTGAACAATCCTCACATCCTCCTACTCTTCTCGAGGAGATTTGTCGAGGCAAGATGAAGGTGAATGAAAAAGATATTGAAAATT
CAAATCCTCTGTCCAAAGGCCCCAAAGCGTCTTTAGAGAAGGTTAAATCCACGCATGCGCCTCTCAAGATTTCCGAGCAGCCTTTAGACACTTCTAGAAAGCAGATAGCA
GGACATCCTGAACTTAGACCAGAAATAGCAACGGTTCTTTCGGGAATTGCAAAGATCCATGTAAACAACCTGACTCCTCTTGAAGAATATTTGAATAGCTACCTTTAG
Protein sequenceShow/hide protein sequence
MAPIHEREVKEHREKSDSSRSNRHWKRPSKKQRHQEMIPTPVARPTEQSSHPPTLLEEICRGKMKVNEKDIENSNPLSKGPKASLEKVKSTHAPLKISEQPLDTSRKQIA
GHPELRPEIATVLSGIAKIHVNNLTPLEEYLNSYL