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PI0010207 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010207
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr03:23941875..23942396
RNA-Seq ExpressionPI0010207
SyntenyPI0010207
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035413.1 retrotransposon protein [Cucumis melo var. makuwa]8.2e-3354.76Show/hide
Query:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGFEAFPTDIGNDLEILMMYNQGLDI
        M GP CS FGWNDE  CIVAE+ ++DNWV SHP  KGLLNKSF +YD+LSYVF KD+A G R E+FAD+G N   G+E F  D   D +   MY+QGL++
Subjt:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGFEAFPTDIGNDLEILMMYNQGLDI

Query:  SPDEVMGTRPVDLVRGGMLLAEAKGK
        SPDE+MG R   +  G  + + +K K
Subjt:  SPDEVMGTRPVDLVRGGMLLAEAKGK

KAA0047075.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-3259.46Show/hide
Query:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGFEAFPTDIGNDLEILMMYNQGLDI
        MRGP CSGFGWNDE  CIV E+ L+D+WV SHP+ KGLLNKSF +YD+LSYVF KD+A G R E+F D+GSN   G++AF  D   D     MY+ GL++
Subjt:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGFEAFPTDIGNDLEILMMYNQGLDI

Query:  SPDEVMGTRPV
        SPD++M TR V
Subjt:  SPDEVMGTRPV

KAA0048374.1 retrotransposon protein [Cucumis melo var. makuwa]2.3e-3556.35Show/hide
Query:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGFEAFPTDIGNDLEILMMYNQGLDI
        MRGP CSGFGWNDE  CIVAE+ ++D+WV SHP  KGLLNKSF +YD+LSYVF KD A G R E+FADVGSN   G++AF  +  +D +   MY++GL++
Subjt:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGFEAFPTDIGNDLEILMMYNQGLDI

Query:  SPDEVMGTRPVDLVRGGMLLAEAKGK
        SPDE+MGTR   +  G  + + +K K
Subjt:  SPDEVMGTRPVDLVRGGMLLAEAKGK

KAA0062747.1 retrotransposon protein [Cucumis melo var. makuwa]8.7e-3555.97Show/hide
Query:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGF-EAFPTDIGNDLEILMMYNQGLD
        MRGP+CSGFGWN+EF CI+AER L+D+WV SHP  KGLL+KSF YYDDLSYVF KD+A GAR ETF DVGSN+   F +  P    +D +I  MY+QG+ 
Subjt:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGF-EAFPTDIGNDLEILMMYNQGLD

Query:  ISPDEVMGTRPVDLVRGGMLLAEAKGKGADKWLK
        ISPDE+ G R  +++R  M     + K    W K
Subjt:  ISPDEVMGTRPVDLVRGGMLLAEAKGKGADKWLK

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]1.8e-3260.91Show/hide
Query:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGF-EAFPTDIGNDLEILMMYNQGLD
        MRGP+CSGFGWN+EF CI+AER L+D+W+ SHP  KGLL+KSF YYDDLSYVF KD+A GAR ETF +VGSN+   F +  P    +D +I  MY+QG+ 
Subjt:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGF-EAFPTDIGNDLEILMMYNQGLD

Query:  ISPDEVMGTR
        +SPDE+ G R
Subjt:  ISPDEVMGTR

TrEMBL top hitse value%identityAlignment
A0A5A7SXX8 Retrotransposon protein3.9e-3354.76Show/hide
Query:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGFEAFPTDIGNDLEILMMYNQGLDI
        M GP CS FGWNDE  CIVAE+ ++DNWV SHP  KGLLNKSF +YD+LSYVF KD+A G R E+FAD+G N   G+E F  D   D +   MY+QGL++
Subjt:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGFEAFPTDIGNDLEILMMYNQGLDI

Query:  SPDEVMGTRPVDLVRGGMLLAEAKGK
        SPDE+MG R   +  G  + + +K K
Subjt:  SPDEVMGTRPVDLVRGGMLLAEAKGK

A0A5A7TZA5 Retrotransposon protein1.1e-3556.35Show/hide
Query:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGFEAFPTDIGNDLEILMMYNQGLDI
        MRGP CSGFGWNDE  CIVAE+ ++D+WV SHP  KGLLNKSF +YD+LSYVF KD A G R E+FADVGSN   G++AF  +  +D +   MY++GL++
Subjt:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGFEAFPTDIGNDLEILMMYNQGLDI

Query:  SPDEVMGTRPVDLVRGGMLLAEAKGK
        SPDE+MGTR   +  G  + + +K K
Subjt:  SPDEVMGTRPVDLVRGGMLLAEAKGK

A0A5A7U098 Retrotransposon protein8.8e-3359.46Show/hide
Query:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGFEAFPTDIGNDLEILMMYNQGLDI
        MRGP CSGFGWNDE  CIV E+ L+D+WV SHP+ KGLLNKSF +YD+LSYVF KD+A G R E+F D+GSN   G++AF  D   D     MY+ GL++
Subjt:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGFEAFPTDIGNDLEILMMYNQGLDI

Query:  SPDEVMGTRPV
        SPD++M TR V
Subjt:  SPDEVMGTRPV

A0A5A7U0H7 Retrotransposon protein8.8e-3360.91Show/hide
Query:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGF-EAFPTDIGNDLEILMMYNQGLD
        MRGP+CSGFGWN+EF CI+AER L+D+W+ SHP  KGLL+KSF YYDDLSYVF KD+A GAR ETF +VGSN+   F +  P    +D +I  MY+QG+ 
Subjt:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGF-EAFPTDIGNDLEILMMYNQGLD

Query:  ISPDEVMGTR
        +SPDE+ G R
Subjt:  ISPDEVMGTR

A0A5D3DG22 Retrotransposon protein4.2e-3555.97Show/hide
Query:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGF-EAFPTDIGNDLEILMMYNQGLD
        MRGP+CSGFGWN+EF CI+AER L+D+WV SHP  KGLL+KSF YYDDLSYVF KD+A GAR ETF DVGSN+   F +  P    +D +I  MY+QG+ 
Subjt:  MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGF-EAFPTDIGNDLEILMMYNQGLD

Query:  ISPDEVMGTRPVDLVRGGMLLAEAKGKGADKWLK
        ISPDE+ G R  +++R  M     + K    W K
Subjt:  ISPDEVMGTRPVDLVRGGMLLAEAKGKGADKWLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGGCCCAGCTTGCAGTGGGTTTGGGTGGAATGACGAATTTCATTGCATCGTTGCTGAACGCTATCTGTATGACAATTGGGTGAATAGTCATCCCGTCGTGAAAGG
CCTACTCAACAAATCCTTTTCGTATTATGATGACTTGTCCTATGTTTTCGAGAAGGATCAGGCCATAGGAGCACGTGTAGAGACCTTCGCGGATGTGGGGTCTAATATCC
TAAGGGGGTTCGAGGCATTTCCCACTGACATAGGTAACGATCTGGAGATCCTCATGATGTACAACCAGGGCCTGGACATATCGCCTGATGAGGTTATGGGGACACGACCA
GTCGATCTGGTGAGGGGAGGAATGCTTCTAGCGGAAGCAAAAGGAAAAGGGGCGGACAAATGGTTGAAACTGTCGACATCATTCACAATGCCATGGAATTTGCGAATGAC
CAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGGCCCAGCTTGCAGTGGGTTTGGGTGGAATGACGAATTTCATTGCATCGTTGCTGAACGCTATCTGTATGACAATTGGGTGAATAGTCATCCCGTCGTGAAAGG
CCTACTCAACAAATCCTTTTCGTATTATGATGACTTGTCCTATGTTTTCGAGAAGGATCAGGCCATAGGAGCACGTGTAGAGACCTTCGCGGATGTGGGGTCTAATATCC
TAAGGGGGTTCGAGGCATTTCCCACTGACATAGGTAACGATCTGGAGATCCTCATGATGTACAACCAGGGCCTGGACATATCGCCTGATGAGGTTATGGGGACACGACCA
GTCGATCTGGTGAGGGGAGGAATGCTTCTAGCGGAAGCAAAAGGAAAAGGGGCGGACAAATGGTTGAAACTGTCGACATCATTCACAATGCCATGGAATTTGCGAATGAC
CAACTGA
Protein sequenceShow/hide protein sequence
MRGPACSGFGWNDEFHCIVAERYLYDNWVNSHPVVKGLLNKSFSYYDDLSYVFEKDQAIGARVETFADVGSNILRGFEAFPTDIGNDLEILMMYNQGLDISPDEVMGTRP
VDLVRGGMLLAEAKGKGADKWLKLSTSFTMPWNLRMTN