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PI0010212 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010212
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:2874268..2875501
RNA-Seq ExpressionPI0010212
SyntenyPI0010212
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031722.1 uncharacterized protein E6C27_scaffold139G005100 [Cucumis melo var. makuwa]1.4e-3665.94Show/hide
Query:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLE--ARAARTGNYERGDSSTGSVAHIEERV
        MS++    KA  DRLVE+EEQM YLVE+P ++ +    L+EIF+K +  DAVTGR++   I EL+TRVD LE      RT NYERGDSSTGSVAHIEERV
Subjt:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLE--ARAARTGNYERGDSSTGSVAHIEERV

Query:  SELDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSAR
         ELDSSQK ++EMINGMSEDFRA LDVVRNEIADV+AR
Subjt:  SELDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSAR

KAA0041962.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-3651.02Show/hide
Query:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE
        MS+     KA  DRLVE+EEQM YLVE+P ++HF    L+EI EK D  DA+ GR++ L I +LL RVDTLE    RTG++ERGDSSTGSVAHIEERV E
Subjt:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE

Query:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSARWQ-----------------SDYLTCPVTLKMRDVIQVPHLEEIRTIMQVFQRPKEEINDL
        LDSSQK ++EMIN MSEDF A LDVVRNEIADV+AR                    D LTC    +   + ++ H+  IR  ++ F     +I D+
Subjt:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSARWQ-----------------SDYLTCPVTLKMRDVIQVPHLEEIRTIMQVFQRPKEEINDL

KAA0045293.1 uncharacterized protein E6C27_scaffold316G00510 [Cucumis melo var. makuwa]1.4e-3666.18Show/hide
Query:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE
        MS+     KA  DRL E+EEQM YL+E+P ++ F    L++I EK D  DAV GR++ LLI ELL RVDTLE    RTG++ERGDSSTGSVAHIEERV E
Subjt:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE

Query:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSAR
        LDSSQK ++EMIN MSEDFRA LDVVRNEIADV+AR
Subjt:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSAR

KAA0051251.1 uncharacterized protein E6C27_scaffold2143G00070 [Cucumis melo var. makuwa]1.8e-3968.38Show/hide
Query:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE
        MS+   + KA  DRLVE+EEQM YLVE+P+++ F    L+EI EK+D  DAV GR+  LLI ELL RVDTLE    RTG++ERGDSSTGSVAHIEERV E
Subjt:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE

Query:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSAR
        LDSSQK ++EMINGMSE+FRA LDVVRNEIADV+AR
Subjt:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSAR

KAA0062476.1 uncharacterized protein E6C27_scaffold130G00660 [Cucumis melo var. makuwa]1.1e-3960.84Show/hide
Query:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHFLK----EIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE
        MSTTKQ+ K   DRLVE++EQM YLVE+  ++HFLK    EI+EK DA DAVT RLD L I ELLTRVDTLE +  RTGNYE GDSST  V+HIEERV E
Subjt:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHFLK----EIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE

Query:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSARWQSDY-----LTCPVTLKMRDVIQVPHLEE
        LDSSQK I+EMIN MS+DFRA LDVVRNEIAD    +  D       T  VT + +  +   HL E
Subjt:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSARWQSDY-----LTCPVTLKMRDVIQVPHLEE

TrEMBL top hitse value%identityAlignment
A0A5A7SKW3 Retrotrans_gag domain-containing protein7.0e-3765.94Show/hide
Query:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLE--ARAARTGNYERGDSSTGSVAHIEERV
        MS++    KA  DRLVE+EEQM YLVE+P ++ +    L+EIF+K +  DAVTGR++   I EL+TRVD LE      RT NYERGDSSTGSVAHIEERV
Subjt:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLE--ARAARTGNYERGDSSTGSVAHIEERV

Query:  SELDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSAR
         ELDSSQK ++EMINGMSEDFRA LDVVRNEIADV+AR
Subjt:  SELDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSAR

A0A5A7TEV3 Reverse transcriptase5.3e-3751.02Show/hide
Query:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE
        MS+     KA  DRLVE+EEQM YLVE+P ++HF    L+EI EK D  DA+ GR++ L I +LL RVDTLE    RTG++ERGDSSTGSVAHIEERV E
Subjt:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE

Query:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSARWQ-----------------SDYLTCPVTLKMRDVIQVPHLEEIRTIMQVFQRPKEEINDL
        LDSSQK ++EMIN MSEDF A LDVVRNEIADV+AR                    D LTC    +   + ++ H+  IR  ++ F     +I D+
Subjt:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSARWQ-----------------SDYLTCPVTLKMRDVIQVPHLEEIRTIMQVFQRPKEEINDL

A0A5A7TP22 Uncharacterized protein7.0e-3766.18Show/hide
Query:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE
        MS+     KA  DRL E+EEQM YL+E+P ++ F    L++I EK D  DAV GR++ LLI ELL RVDTLE    RTG++ERGDSSTGSVAHIEERV E
Subjt:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE

Query:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSAR
        LDSSQK ++EMIN MSEDFRA LDVVRNEIADV+AR
Subjt:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSAR

A0A5A7UCI7 Uncharacterized protein8.8e-4068.38Show/hide
Query:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE
        MS+   + KA  DRLVE+EEQM YLVE+P+++ F    L+EI EK+D  DAV GR+  LLI ELL RVDTLE    RTG++ERGDSSTGSVAHIEERV E
Subjt:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHF----LKEIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE

Query:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSAR
        LDSSQK ++EMINGMSE+FRA LDVVRNEIADV+AR
Subjt:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSAR

A0A5D3DUL1 Uncharacterized protein5.2e-4060.84Show/hide
Query:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHFLK----EIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE
        MSTTKQ+ K   DRLVE++EQM YLVE+  ++HFLK    EI+EK DA DAVT RLD L I ELLTRVDTLE +  RTGNYE GDSST  V+HIEERV E
Subjt:  MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHFLK----EIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSE

Query:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSARWQSDY-----LTCPVTLKMRDVIQVPHLEE
        LDSSQK I+EMIN MS+DFRA LDVVRNEIAD    +  D       T  VT + +  +   HL E
Subjt:  LDSSQKLIVEMINGMSEDFRAALDVVRNEIADVSARWQSDY-----LTCPVTLKMRDVIQVPHLEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACAACGAAACAGATGGATAAGGCCCACATAGACCGATTGGTAGAGATCGAAGAGCAGATGTTCTACCTGGTGGAAATTCCAGTCACCGTGCACTTCTTGAAAGA
AATTTTTGAGAAAGTTGATGCTACTGATGCAGTGACCGGTCGCCTCGACAAATTACTTATAAACGAGTTGTTGACAAGAGTCGACACTCTAGAGGCAAGGGCTGCAAGAA
CTGGTAACTACGAGCGTGGGGACAGTTCAACGGGCTCTGTTGCCCACATAGAGGAACGGGTTAGCGAGCTAGATAGCTCCCAAAAGTTGATCGTCGAGATGATAAATGGC
ATGTCAGAGGATTTTCGTGCCGCTCTTGACGTCGTCAGGAATGAGATTGCAGACGTGAGCGCGAGGTGGCAGAGCGACTATTTGACCTGTCCAGTGACTCTCAAGATGCG
AGACGTCATTCAAGTTCCTCATTTGGAGGAAATAAGAACAATCATGCAAGTTTTCCAAAGGCCGAAGGAGGAGATAAACGATCTAGTGGTGATCGTAGGCCCTTTCAACC
AAACATCGGGAACACGGGGCGAGGATAGAACCACCAAAACTCTCACAATCGTCCCCCTTCCTGTTTCATATGTAAGGGGCCGCACATGGCGAGAGAATGTCCGAATCGAA
CCACCTTTAACGCCTTTCAGGCTGCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTACAACGAAACAGATGGATAAGGCCCACATAGACCGATTGGTAGAGATCGAAGAGCAGATGTTCTACCTGGTGGAAATTCCAGTCACCGTGCACTTCTTGAAAGA
AATTTTTGAGAAAGTTGATGCTACTGATGCAGTGACCGGTCGCCTCGACAAATTACTTATAAACGAGTTGTTGACAAGAGTCGACACTCTAGAGGCAAGGGCTGCAAGAA
CTGGTAACTACGAGCGTGGGGACAGTTCAACGGGCTCTGTTGCCCACATAGAGGAACGGGTTAGCGAGCTAGATAGCTCCCAAAAGTTGATCGTCGAGATGATAAATGGC
ATGTCAGAGGATTTTCGTGCCGCTCTTGACGTCGTCAGGAATGAGATTGCAGACGTGAGCGCGAGGTGGCAGAGCGACTATTTGACCTGTCCAGTGACTCTCAAGATGCG
AGACGTCATTCAAGTTCCTCATTTGGAGGAAATAAGAACAATCATGCAAGTTTTCCAAAGGCCGAAGGAGGAGATAAACGATCTAGTGGTGATCGTAGGCCCTTTCAACC
AAACATCGGGAACACGGGGCGAGGATAGAACCACCAAAACTCTCACAATCGTCCCCCTTCCTGTTTCATATGTAAGGGGCCGCACATGGCGAGAGAATGTCCGAATCGAA
CCACCTTTAACGCCTTTCAGGCTGCCTTAG
Protein sequenceShow/hide protein sequence
MSTTKQMDKAHIDRLVEIEEQMFYLVEIPVTVHFLKEIFEKVDATDAVTGRLDKLLINELLTRVDTLEARAARTGNYERGDSSTGSVAHIEERVSELDSSQKLIVEMING
MSEDFRAALDVVRNEIADVSARWQSDYLTCPVTLKMRDVIQVPHLEEIRTIMQVFQRPKEEINDLVVIVGPFNQTSGTRGEDRTTKTLTIVPLPVSYVRGRTWRENVRIE
PPLTPFRLP