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PI0010264 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010264
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr05:8746262..8746756
RNA-Seq ExpressionPI0010264
SyntenyPI0010264
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036886.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]1.9e-6271.61Show/hide
Query:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH
        SYLW+GKE+GRGG KVAWVDVC PF+EGGL IR+G SWN A  LK+LWLMLT+ GSLWVAW+EAYILKG+SLW VDS VG SW  RAILR R+ L+ HV 
Subjt:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH

Query:  MVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP
        M VG+G RCRVWL+PWL  GAI+ Q+GERV+YD  S REARLS+FI  NGEW WP
Subjt:  MVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP

KAA0059752.1 F17F8.5 [Cucumis melo var. makuwa]7.6e-5667.95Show/hide
Query:  MSYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHV
        +SYLWRGKE+GRGG KVAWVDVC PF+E GL IR+G SWN A  LK+L LMLT+ GSLWVAWV+AYILKGRSLW VDS VG SW LRAILR R+ L+  V
Subjt:  MSYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHV

Query:  HMVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP
         M VG+   CRVWL+ WL   AI+ Q+GERV+YD  S REARLS+FI  +GEW WP
Subjt:  HMVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]1.7e-6071.61Show/hide
Query:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH
        SYLWRGKE+GRGG KVAWVDVC PF+EGGL IR+G SWN A  LK+LWLMLT+ GSLWVAWVEAYILKGRSLW VDS VG SW LRAILR R+ L+  V 
Subjt:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH

Query:  MVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP
        M VG+G   RVWL+PWL EGAI+ Q+GERV+YD  S R+ARLS+FI  +GEW WP
Subjt:  MVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP

TYJ96685.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]1.9e-6271.61Show/hide
Query:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH
        SYLW+GKE+GRGG KVAWVDVC PF+EGGL IR+G SWN A  LK+LWLMLT+ GSLWVAW+EAYILKG+SLW VDS VG SW  RAILR R+ L+ HV 
Subjt:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH

Query:  MVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP
        M VG+G RCRVWL+PWL  GAI+ Q+GERV+YD  S REARLS+FI  NGEW WP
Subjt:  MVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP

XP_031745730.1 uncharacterized protein LOC116406187 [Cucumis sativus]3.4e-5663.87Show/hide
Query:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH
        +YLWRGK++GRG  KVAW +VC PF EGGL+IR+G SWN A  LK+LWL+L   GSLWVAWVE+YILKGRSLW +D+GVG SW  R ILR +DIL+ HV 
Subjt:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH

Query:  MVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP
        M VG+GR+ RVWL PW+  G II+Q GERV+YD  S  +ARL +F+G +G+WRWP
Subjt:  MVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP

TrEMBL top hitse value%identityAlignment
A0A5A7T440 Zf-RVT domain-containing protein9.0e-6371.61Show/hide
Query:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH
        SYLW+GKE+GRGG KVAWVDVC PF+EGGL IR+G SWN A  LK+LWLMLT+ GSLWVAW+EAYILKG+SLW VDS VG SW  RAILR R+ L+ HV 
Subjt:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH

Query:  MVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP
        M VG+G RCRVWL+PWL  GAI+ Q+GERV+YD  S REARLS+FI  NGEW WP
Subjt:  MVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP

A0A5A7TWG5 Reverse transcriptase domain-containing protein2.6e-4973.02Show/hide
Query:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH
        SYLWRGKE+GRGG KVAWVDVC PF+EGGL IR+G SWN A  LK+LWLMLT+ GSLWVAWVEAYILK RSLW VDS VG SW LRAILR R+ L+ HV 
Subjt:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH

Query:  MVVGDGRRCRVWLNPWLHEGAIIRQM
        M VG+G RCRVWL+PWL  GAI+ ++
Subjt:  MVVGDGRRCRVWLNPWLHEGAIIRQM

A0A5A7UV01 F17F8.53.7e-5667.95Show/hide
Query:  MSYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHV
        +SYLWRGKE+GRGG KVAWVDVC PF+E GL IR+G SWN A  LK+L LMLT+ GSLWVAWV+AYILKGRSLW VDS VG SW LRAILR R+ L+  V
Subjt:  MSYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHV

Query:  HMVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP
         M VG+   CRVWL+ WL   AI+ Q+GERV+YD  S REARLS+FI  +GEW WP
Subjt:  HMVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP

A0A5A7V3Z0 Reverse transcriptase domain-containing protein8.5e-6171.61Show/hide
Query:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH
        SYLWRGKE+GRGG KVAWVDVC PF+EGGL IR+G SWN A  LK+LWLMLT+ GSLWVAWVEAYILKGRSLW VDS VG SW LRAILR R+ L+  V 
Subjt:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH

Query:  MVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP
        M VG+G   RVWL+PWL EGAI+ Q+GERV+YD  S R+ARLS+FI  +GEW WP
Subjt:  MVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP

A0A5D3BDZ6 Zf-RVT domain-containing protein9.0e-6371.61Show/hide
Query:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH
        SYLW+GKE+GRGG KVAWVDVC PF+EGGL IR+G SWN A  LK+LWLMLT+ GSLWVAW+EAYILKG+SLW VDS VG SW  RAILR R+ L+ HV 
Subjt:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVH

Query:  MVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP
        M VG+G RCRVWL+PWL  GAI+ Q+GERV+YD  S REARLS+FI  NGEW WP
Subjt:  MVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWP

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657506.3e-1334.71Show/hide
Query:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGR---SLWSVDSGVGWSWSLRAI-LRHRDILR
        ++LW    + +    V W  VC P KEGGL +R  KS N A I KV W +L    SLW   ++     G    S W +  G  WS + R+I +  RD++ 
Subjt:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGR---SLWSVDSGVGWSWSLRAI-LRHRDILR

Query:  EHVHMVVGDGRRCRVWLNPWL
          V  + GDG++ R W + W+
Subjt:  EHVHMVVGDGRRCRVWLNPWL

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.8e-1029.25Show/hide
Query:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVG-WSWSLRAILRHRDILREHV
        S+LW G E      KVAW DVC P  EGGL IR  K  N                            KG S WS+       SW  + IL+HR +    V
Subjt:  SYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVG-WSWSLRAILRHRDILREHV

Query:  HMVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFI
           + +G     W + W   G +I   G R   D   +  A ++E +
Subjt:  HMVVGDGRRCRVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFI

AT3G25720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.3e-1330.43Show/hide
Query:  VDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKG------RSLWSVDSGVGWSWSLRAILRHRDILREHVHMVVGDGRRCRVW
        + VC P  EGGL +R    WN+   LK++W + +  GSLWV W   + L+G         W+    V  SW+ + +LR R +    +   +G+G   R W
Subjt:  VDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKG------RSLWSVDSGVGWSWSLRAILRHRDILREHVHMVVGDGRRCRVW

Query:  LNPWLHEGAIIRQMG
         + W   G ++  +G
Subjt:  LNPWLHEGAIIRQMG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATATTTGTGGAGGGGTAAGGAGGATGGGAGAGGGGGTACGAAGGTTGCTTGGGTGGATGTGTGTTGCCCGTTTAAGGAAGGGGGTCTTAATATTCGGGAGGGTAA
GTCGTGGAACAGTGCGTGTATCTTGAAGGTTCTTTGGCTGATGTTGACTAGTTTTGGGTCTCTGTGGGTTGCTTGGGTGGAGGCCTATATTCTGAAGGGGCGGTCGTTGT
GGTCTGTGGATAGTGGGGTTGGTTGGTCCTGGAGTCTTCGTGCTATTCTGAGGCATCGTGATATCCTTAGAGAGCATGTCCATATGGTGGTTGGTGATGGGAGGCGGTGT
CGTGTGTGGCTTAACCCTTGGCTGCACGAAGGCGCGATCATTCGGCAGATGGGTGAGAGGGTGGTGTATGATACTACGAGTAGTAGAGAGGCTAGGCTTTCTGAGTTCAT
TGGCTCGAATGGTGAGTGGAGGTGGCCATATCGTATATCCCCAAATACTTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATATTTGTGGAGGGGTAAGGAGGATGGGAGAGGGGGTACGAAGGTTGCTTGGGTGGATGTGTGTTGCCCGTTTAAGGAAGGGGGTCTTAATATTCGGGAGGGTAA
GTCGTGGAACAGTGCGTGTATCTTGAAGGTTCTTTGGCTGATGTTGACTAGTTTTGGGTCTCTGTGGGTTGCTTGGGTGGAGGCCTATATTCTGAAGGGGCGGTCGTTGT
GGTCTGTGGATAGTGGGGTTGGTTGGTCCTGGAGTCTTCGTGCTATTCTGAGGCATCGTGATATCCTTAGAGAGCATGTCCATATGGTGGTTGGTGATGGGAGGCGGTGT
CGTGTGTGGCTTAACCCTTGGCTGCACGAAGGCGCGATCATTCGGCAGATGGGTGAGAGGGTGGTGTATGATACTACGAGTAGTAGAGAGGCTAGGCTTTCTGAGTTCAT
TGGCTCGAATGGTGAGTGGAGGTGGCCATATCGTATATCCCCAAATACTTGGTAA
Protein sequenceShow/hide protein sequence
MSYLWRGKEDGRGGTKVAWVDVCCPFKEGGLNIREGKSWNSACILKVLWLMLTSFGSLWVAWVEAYILKGRSLWSVDSGVGWSWSLRAILRHRDILREHVHMVVGDGRRC
RVWLNPWLHEGAIIRQMGERVVYDTTSSREARLSEFIGSNGEWRWPYRISPNTW