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PI0010283 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010283
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 297 family
Genome locationchr04:24647578..24648669
RNA-Seq ExpressionPI0010283
SyntenyPI0010283
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042324.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa]4.1e-2560.5Show/hide
Query:  IILYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILK
        + L  L  LESL+ LEEHDKFN+LIDQATLE+V+NEFAK KPS DDLS FLDFVTS+N+E+ LVDNI  +E H   N+F S        NI DD E ILK
Subjt:  IILYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILK

Query:  TIGIDNDHNINTYIENFEK
        +I I+NDH+ + +I+NFEK
Subjt:  TIGIDNDHNINTYIENFEK

KAA0063162.1 hypothetical protein E6C27_scaffold381G00430 [Cucumis melo var. makuwa]2.8e-2661.06Show/hide
Query:  LYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFA--------SNIIDDDEQILKTI
        L  L   ESLETLE+HD+F++LIDQATLEYV+NEFAK KPS DD+S FLDF  S+N+EH LVDNI  +EQH L N+FA         NI DDDE ILK+I
Subjt:  LYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFA--------SNIIDDDEQILKTI

Query:  GIDNDHNINTYIE
        GI+NDH+ + +I+
Subjt:  GIDNDHNINTYIE

KAA0065429.1 Retrovirus-related Pol polyprotein from transposon 17.6 [Cucumis melo var. makuwa]7.0e-2570.79Show/hide
Query:  EYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILKTIGIDNDHNINTYIENFEK
        ++VDNEFAKEKP+ DDLS FL+FVTSIN+EH LVDN+T HEQHALGNNF S        +I DDDEQILK+I IDNDH+INT+I+NFEK
Subjt:  EYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILKTIGIDNDHNINTYIENFEK

KAA0066481.1 Retrotransposon gag protein [Cucumis melo var. makuwa]3.8e-2361.26Show/hide
Query:  IILYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILK
        + L  L  +ESL+TL+EHD+FNDLI+QATLEY+DNEFAK KPS DDLS FLDFV S+N+EH LVDNI  +E H L N+FAS        NI +DDE  LK
Subjt:  IILYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILK

Query:  TIGIDNDHNIN
         I I+ND  IN
Subjt:  TIGIDNDHNIN

KAE8647060.1 hypothetical protein Csa_022980 [Cucumis sativus]1.8e-2862.5Show/hide
Query:  IILYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILK
        + L  L  LESLETLEE DK N+LIDQATLEYVDNEF+KEKPS DDLS FL+FV SIN+EH LVDN+T H+QHALGNNFAS        +I D+DEQ LK
Subjt:  IILYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILK

Query:  TIGIDNDHNINTYIENFEKR
         I IDN+ + + +I   +K+
Subjt:  TIGIDNDHNINTYIENFEKR

TrEMBL top hitse value%identityAlignment
A0A0A0KY93 Uncharacterized protein2.2e-2462.62Show/hide
Query:  IILYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILK
        +++  L ++ ++ET  EHDKFN+LI+Q TLEY DN+FAKEKPS +DLS FLDFVTSIN+EH LVDN+  HEQHALGN  AS        +I DDDE ILK
Subjt:  IILYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILK

Query:  TIGIDND
        TIGIDN+
Subjt:  TIGIDND

A0A5A7V4I7 Uncharacterized protein1.4e-2661.06Show/hide
Query:  LYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFA--------SNIIDDDEQILKTI
        L  L   ESLETLE+HD+F++LIDQATLEYV+NEFAK KPS DD+S FLDF  S+N+EH LVDNI  +EQH L N+FA         NI DDDE ILK+I
Subjt:  LYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFA--------SNIIDDDEQILKTI

Query:  GIDNDHNINTYIE
        GI+NDH+ + +I+
Subjt:  GIDNDHNINTYIE

A0A5A7VIZ2 Retrovirus-related Pol polyprotein from transposon 17.63.4e-2570.79Show/hide
Query:  EYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILKTIGIDNDHNINTYIENFEK
        ++VDNEFAKEKP+ DDLS FL+FVTSIN+EH LVDN+T HEQHALGNNF S        +I DDDEQILK+I IDNDH+INT+I+NFEK
Subjt:  EYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILKTIGIDNDHNINTYIENFEK

A0A5D3CW21 Retrovirus-related Pol polyprotein from transposon 297 family2.0e-2560.5Show/hide
Query:  IILYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILK
        + L  L  LESL+ LEEHDKFN+LIDQATLE+V+NEFAK KPS DDLS FLDFVTS+N+E+ LVDNI  +E H   N+F S        NI DD E ILK
Subjt:  IILYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILK

Query:  TIGIDNDHNINTYIENFEK
        +I I+NDH+ + +I+NFEK
Subjt:  TIGIDNDHNINTYIENFEK

A0A5D3DU65 Retrotransposon gag protein1.9e-2361.26Show/hide
Query:  IILYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILK
        + L  L  +ESL+TL+EHD+FNDLI+QATLEY+DNEFAK KPS DDLS FLDFV S+N+EH LVDNI  +E H L N+FAS        NI +DDE  LK
Subjt:  IILYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFAS--------NIIDDDEQILK

Query:  TIGIDNDHNIN
         I I+ND  IN
Subjt:  TIGIDNDHNIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCTTCATCTAATAATGATTCAAAGAACATTGTTGATAATCCTCTACCTCCTTTTCCTTCTAGAATCATTAGAGACATTAGAAGAGCATGATAAATTCAATGACCT
TATAGATCAAGCAACTCTCGAATATGTTGATAATGAATTTGCTAAGGAGAAACCTAGTCATGATGATCTTTCTACCTTCCTTGACTTTGTTACTAGTATAAATAATGAGC
ATACTTTGGTTGATAATATTACAGCACATGAACAACATGCTCTAGGTAATAATTTTGCATCTAACATTATAGATGATGATGAACAAATTTTGAAAACCATAGGAATTGAT
AATGATCATAACATAAACACCTACATAGAAAACTTTGAAAAGAGAATGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCTTCATCTAATAATGATTCAAAGAACATTGTTGATAATCCTCTACCTCCTTTTCCTTCTAGAATCATTAGAGACATTAGAAGAGCATGATAAATTCAATGACCT
TATAGATCAAGCAACTCTCGAATATGTTGATAATGAATTTGCTAAGGAGAAACCTAGTCATGATGATCTTTCTACCTTCCTTGACTTTGTTACTAGTATAAATAATGAGC
ATACTTTGGTTGATAATATTACAGCACATGAACAACATGCTCTAGGTAATAATTTTGCATCTAACATTATAGATGATGATGAACAAATTTTGAAAACCATAGGAATTGAT
AATGATCATAACATAAACACCTACATAGAAAACTTTGAAAAGAGAATGATTTAG
Protein sequenceShow/hide protein sequence
MLLHLIMIQRTLLIILYLLFLLESLETLEEHDKFNDLIDQATLEYVDNEFAKEKPSHDDLSTFLDFVTSINNEHTLVDNITAHEQHALGNNFASNIIDDDEQILKTIGID
NDHNINTYIENFEKRMI