; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0010287 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010287
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr03:9157792..9158583
RNA-Seq ExpressionPI0010287
SyntenyPI0010287
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]2.9e-4955.93Show/hide
Query:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNR------RGGRA
        M+F+Q+DRENL D W RFKRM+K CPH+ IP+C+L+E FYFGL+K T Q+A+ VF  GML+S+YNQIK  LDTMASN++EW ++ FG+R      +G R 
Subjt:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNR------RGGRA

Query:  K-DDGMDKNVVVALQGQMTAMNNLLKSMAISQVNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVRNDP
        + +DG+D +++VALQGQ+  M N+L+SMA+ QVN   S V    Q+++MGCVGC   HNT+ACPLNTE +A+++NDP
Subjt:  K-DDGMDKNVVVALQGQMTAMNNLLKSMAISQVNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVRNDP

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]4.5e-4260.71Show/hide
Query:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKDDGMD
        M F+Q+D+EN+HD WSRFKR+VKACP +GIP+C+ +EVFYFGL+K T Q  + +FV GML+S+YNQIK TLD+M++N++EWD+  FG+R  GR K +G+D
Subjt:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKDDGMD

Query:  KNVVVALQGQMTAMNNLLKSMAISQVNAAGSFVLAANQID
        K+VVV LQGQM AMNNLL+SM +SQVNAA +++ A  Q++
Subjt:  KNVVVALQGQMTAMNNLLKSMAISQVNAAGSFVLAANQID

XP_038874978.1 putative uncharacterized protein DDB_G0279653 [Benincasa hispida]4.3e-4539.26Show/hide
Query:  MKKFFPPHENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDE
        MKKFFPP  NARR+K +++F+Q D E L  AW  F+R+VK  PH GI  C+L+E FY  LN++TQ  ADA  V G +  TY + K  LD ++ N ++W +
Subjt:  MKKFFPPHENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDE

Query:  DDFGNRRGGRAKDDG--MDKNVVVALQGQMTAMNNLLKSMAISQ--VNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVRNDPFSNTYNPGW
        D +G R   R ++D   +  + +  L  QM A+ +LL++MAI+Q  ++ + +   A  Q+  + CV  GG H  + CP N +++  ++N+P+SNTYNPGW
Subjt:  DDFGNRRGGRAKDDG--MDKNVVVALQGQMTAMNNLLKSMAISQ--VNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVRNDPFSNTYNPGW

Query:  RNHPNFGWGGS---GQQQGRHGGQGDHRGEAPGSHARYQNNRPQQSHHQQHPTTTTSSTSPMENLLREYM
        RNHPNF WGG+   G Q         +RG     H     +   Q H+Q   + T+ + S  E+LL+ Y+
Subjt:  RNHPNFGWGGS---GQQQGRHGGQGDHRGEAPGSHARYQNNRPQQSHHQQHPTTTTSSTSPMENLLREYM

XP_038876668.1 uncharacterized protein LOC120069060 [Benincasa hispida]1.3e-4138.2Show/hide
Query:  MKKFFPPHENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDE
        MKKFFP   NARR K++++F+Q D E L      F+R+VK CPH GIP CIL+E FY GLN++TQ  ADA   +G++  TY + K  LD +  N  +W +
Subjt:  MKKFFPPHENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDE

Query:  DDFGNRRGGRAKDD--GMDKNVVVALQGQMTAMNNLLKSMAISQ--VNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVRNDPFSNTYNPGW
        D +G R   R ++D   +  + +  L  QM  +++LL+ MAI+Q  ++ + +   A  Q+  + CV CGG H  + CP N + +  ++ + +SNTYN GW
Subjt:  DDFGNRRGGRAKDD--GMDKNVVVALQGQMTAMNNLLKSMAISQ--VNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVRNDPFSNTYNPGW

Query:  RNHPNFGWGGSGQQQGRHGGQGDHRGEAPGSHARYQNNRPQQSHHQQHPTTTTSSTSPMENLLREYM
         NHPNFGWG +  Q G +  Q ++ G      + +QN   +Q  +Q   + T+  +S +E+LL++Y+
Subjt:  RNHPNFGWGGSGQQQGRHGGQGDHRGEAPGSHARYQNNRPQQSHHQQHPTTTTSSTSPMENLLREYM

XP_038902511.1 uncharacterized protein LOC120089170 [Benincasa hispida]1.4e-4036.63Show/hide
Query:  MKKFFPPHENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDE
        MKKFFPP  NARR+ ++++F+  + E L  AW RF+R+VK CPH  I  C+L+E FY GL ++ Q  A+A   +G +   Y + K  LD +  N ++W +
Subjt:  MKKFFPPHENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDE

Query:  DDFGNRRGGRAKDDG--MDKNVVVALQGQMTAMNNLLKSMAIS----QVNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVRNDPFSNTYNP
        + +G R   R K +   +  +++  L  QM  + +LL+ MAI+       AA    LA  Q+  + C  CG  H+ + CP N + +  ++N+P++NTYNP
Subjt:  DDFGNRRGGRAKDDG--MDKNVVVALQGQMTAMNNLLKSMAIS----QVNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVRNDPFSNTYNP

Query:  GWRNHPNFGWGGSGQQQGRHGGQ--GDHRGEAPGSH--ARYQNNRPQQSHHQQHPTTTTSSTSPMENLLREYM
        GWRNHPNF WGG+  Q G+   Q   ++RG  P  H      +++ +QSH+Q   +  ++++S +E LL++Y+
Subjt:  GWRNHPNFGWGGSGQQQGRHGGQ--GDHRGEAPGSH--ARYQNNRPQQSHHQQHPTTTTSSTSPMENLLREYM

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein2.2e-4260.71Show/hide
Query:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKDDGMD
        M F+Q+D+EN+HD WSRFKR+VKACP +GIP+C+ +EVFYFGL+K T Q  + +FV GML+S+YNQIK TLD+M++N++EWD+  FG+R  GR K +G+D
Subjt:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGRAKDDGMD

Query:  KNVVVALQGQMTAMNNLLKSMAISQVNAAGSFVLAANQID
        K+VVV LQGQM AMNNLL+SM +SQVNAA +++ A  Q++
Subjt:  KNVVVALQGQMTAMNNLLKSMAISQVNAAGSFVLAANQID

A0A5A7V1F3 Retrotrans_gag domain-containing protein2.3e-3641.23Show/hide
Query:  MKKFFPPHENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDE
        MKKFFP  + A+RR++L+ F+Q+DR+NLHDAWS FKRMVKAC H+GI K +L+E FYFGL+K T+Q+AD++F+ G+L+S+YNQIK  LD+MA+N+++   
Subjt:  MKKFFPPHENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDE

Query:  DDFGNRRGGRAKDDGMDKNVVVALQGQMTAMNNLLKSMAISQVNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHP
                                                           A   +++M C GCGG HNTDACPLN E +A+V+ DP      P +   P
Subjt:  DDFGNRRGGRAKDDGMDKNVVVALQGQMTAMNNLLKSMAISQVNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHP

Query:  NFGWGGSGQQQ
            GG GQ Q
Subjt:  NFGWGGSGQQQ

A0A5D3CC26 Uncharacterized protein1.4e-4955.93Show/hide
Query:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNR------RGGRA
        M+F+Q+DRENL D W RFKRM+K CPH+ IP+C+L+E FYFGL+K T Q+A+ VF  GML+S+YNQIK  LDTMASN++EW ++ FG+R      +G R 
Subjt:  MSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNR------RGGRA

Query:  K-DDGMDKNVVVALQGQMTAMNNLLKSMAISQVNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVRNDP
        + +DG+D +++VALQGQ+  M N+L+SMA+ QVN   S V    Q+++MGCVGC   HNT+ACPLNTE +A+++NDP
Subjt:  K-DDGMDKNVVVALQGQMTAMNNLLKSMAISQVNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVRNDP

A0A6J1EEI2 uncharacterized protein LOC1114333948.8e-3636.23Show/hide
Query:  KFFPPHENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDD
        K+FPP  NAR R E++ FQQ + + L +AW RFK M++ CPH+G+P CI +E FY GLN AT+Q  DA     +L  TYN+    L+ +ASNN +W +  
Subjt:  KFFPPHENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDD

Query:  FGNRRGGRAKDDGMDKNVVVALQGQMTAMNNLLKSMAISQ---VNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFV---------RNDPFSN
              GR     ++ + + ++  Q+ ++ N+L+++A+ Q   + A    V   NQ     CV CG  H  D CP N  +I +V         +N+PFSN
Subjt:  FGNRRGGRAKDDGMDKNVVVALQGQMTAMNNLLKSMAISQ---VNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFV---------RNDPFSN

Query:  TYNPGWRNHPNFGWGGSGQQQGRHGGQGDHRGEAPGSHARYQNNRPQQSHHQQH---PTTTTSSTSPMENLLREYM
        TYNPGWRNHPNF W G G    +   + ++    PG   + Q     Q  + Q    P    +  + +E+L++EYM
Subjt:  TYNPGWRNHPNFGWGGSGQQQGRHGGQGDHRGEAPGSHARYQNNRPQQSHHQQH---PTTTTSSTSPMENLLREYM

A0A6J1H7E4 uncharacterized protein LOC1114611681.2e-3740.37Show/hide
Query:  KFFPPHENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDD
        K+FPP  NAR R E+++FQQ + E L +AW RFK M++ CPH+G+P CI +E FY GLN AT+Q  DA     ML  TYN+    L+ +ASNN +W +  
Subjt:  KFFPPHENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDD

Query:  FGNRRGGRAKDDGMDKNVVVALQGQMTAMNNLLKSMAISQ---VNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVR---------NDPFSN
              G+     ++ + + ++  Q+ ++ N+L+++A  Q   + A         Q     CV CG  H  D CP N  +I +VR         N+P SN
Subjt:  FGNRRGGRAKDDGMDKNVVVALQGQMTAMNNLLKSMAISQ---VNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVR---------NDPFSN

Query:  TYNPGWRNHPNFGWGGSG
        TYNPGWRNHPNF W G G
Subjt:  TYNPGWRNHPNFGWGGSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAATTTTTCCCACCTCACGAAAATGCTAGAAGGAGGAAGGAACTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATGACGCGTGGAGTAGGTTCAAACG
GATGGTCAAAGCATGCCCCCACAATGGCATTCCTAAATGCATATTGATTGAGGTTTTCTACTTTGGACTAAACAAGGCCACACAGCAGACTGCTGATGCTGTGTTTGTAG
ACGGTATGCTGAAAAGTACATACAACCAGATTAAGACGACGCTGGACACGATGGCCAGCAATAATGAAGAGTGGGATGAAGATGATTTCGGCAATCGTCGAGGAGGACGA
GCAAAAGATGATGGCATGGATAAGAACGTCGTGGTGGCATTGCAGGGACAAATGACTGCGATGAACAATTTACTTAAATCAATGGCAATATCGCAAGTCAATGCCGCAGG
AAGCTTTGTGCTCGCGGCTAACCAAATTGATGACATGGGATGTGTGGGATGCGGTGGTCATCATAACACTGACGCATGCCCACTCAATACTGAAACTATCGCGTTCGTAA
GGAACGACCCCTTCTCCAATACCTACAACCCTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATCGGGTCAACAACAAGGGCGACATGGTGGTCAAGGTGACCAT
CGCGGGGAAGCACCTGGCTCCCACGCGAGGTACCAAAACAATAGACCCCAACAATCCCATCATCAACAGCATCCCACCACCACAACCTCGTCCACCTCTCCCATGGAAAA
CCTCCTCCGCGAATACATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAATTTTTCCCACCTCACGAAAATGCTAGAAGGAGGAAGGAACTTATGAGCTTCCAGCAGAAGGATAGAGAAAACCTACATGACGCGTGGAGTAGGTTCAAACG
GATGGTCAAAGCATGCCCCCACAATGGCATTCCTAAATGCATATTGATTGAGGTTTTCTACTTTGGACTAAACAAGGCCACACAGCAGACTGCTGATGCTGTGTTTGTAG
ACGGTATGCTGAAAAGTACATACAACCAGATTAAGACGACGCTGGACACGATGGCCAGCAATAATGAAGAGTGGGATGAAGATGATTTCGGCAATCGTCGAGGAGGACGA
GCAAAAGATGATGGCATGGATAAGAACGTCGTGGTGGCATTGCAGGGACAAATGACTGCGATGAACAATTTACTTAAATCAATGGCAATATCGCAAGTCAATGCCGCAGG
AAGCTTTGTGCTCGCGGCTAACCAAATTGATGACATGGGATGTGTGGGATGCGGTGGTCATCATAACACTGACGCATGCCCACTCAATACTGAAACTATCGCGTTCGTAA
GGAACGACCCCTTCTCCAATACCTACAACCCTGGTTGGAGGAACCATCCCAACTTTGGATGGGGAGGATCGGGTCAACAACAAGGGCGACATGGTGGTCAAGGTGACCAT
CGCGGGGAAGCACCTGGCTCCCACGCGAGGTACCAAAACAATAGACCCCAACAATCCCATCATCAACAGCATCCCACCACCACAACCTCGTCCACCTCTCCCATGGAAAA
CCTCCTCCGCGAATACATGTAG
Protein sequenceShow/hide protein sequence
MKKFFPPHENARRRKELMSFQQKDRENLHDAWSRFKRMVKACPHNGIPKCILIEVFYFGLNKATQQTADAVFVDGMLKSTYNQIKTTLDTMASNNEEWDEDDFGNRRGGR
AKDDGMDKNVVVALQGQMTAMNNLLKSMAISQVNAAGSFVLAANQIDDMGCVGCGGHHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHPNFGWGGSGQQQGRHGGQGDH
RGEAPGSHARYQNNRPQQSHHQQHPTTTTSSTSPMENLLREYM