CuGenDBv2

Gene ID	PI0010324
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Protein FAR1-RELATED SEQUENCE 4-like
Genome location	chr08:3498841..3499784
RNA-Seq Expression	PI0010324
Synteny	PI0010324
Gene Ontology terms	GO:0005488 - binding (molecular function)
InterPro domains	IPR018289 - MULE transposase domain

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031318.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]

1.0e-64

51.69

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Query:  SSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN
        SSS+ +D +++ +I         DLKEK +  SKE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++H+CS+N
Subjt:  SSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN

Query:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF
          Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D  GHFK+
Subjt:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF

Query:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

TYK09469.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]

1.0e-64

51.69

Show/hide

Query:  SSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN
        SSS+ +D +++ +I         DLKEK +  SKE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++H+CS+N
Subjt:  SSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN

Query:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF
          Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D  GHFK+
Subjt:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF

Query:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]

2.7e-65

51.28

Show/hide

Query:  LLNVGSSSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISD
        L ++ SSSS+ +D +++ +I         DLKEK +  SKE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++
Subjt:  LLNVGSSSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISD

Query:  HDCSLNTTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDD
        H+CS+N  Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D 
Subjt:  HDCSLNTTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDD

Query:  SGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
         GHFK+CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  SGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]

5.0e-80

58.74

Show/hide

Query:  LLNVGSSSSVSNDEVIREICYHGDLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWY------------MLRKYISDHDCSLN
        LL +GSSS  SND+VI+ + ++GDLKEK + GSKE++ KCF +IAV  NF FRTT SN +S E  CLQEGC+WY            MLRKYISDH+C +N
Subjt:  LLNVGSSSSVSNDEVIREICYHGDLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWY------------MLRKYISDHDCSLN

Query:  TTQSFH----------------RFMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHF
        TTQS H                RF+STD S P+ IV+KART LGV+IS+QKAWR KEHI++ L GD  +SYSLI  FF +L E  P T TAL++D++GHF
Subjt:  TTQSFH----------------RFMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHF

Query:  KFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        K CFM  GASI+GW+ Y  P ISVDGTFLK KFGG LL+ S+ D NN IFPLAFAIV SEND SW WFF
Subjt:  KFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]

3.4e-68

55.08

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Query:  EVIREICYHGDLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWY------------MLRKYISDHDCSLNTTQSFH-------
        +VI +I    DLKEK +  SKE++SKCF  IAVK NF F+T  SN RS+EF C+Q+GC+WY            MLRK+I  HDCS+N  Q+ H       
Subjt:  EVIREICYHGDLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWY------------MLRKYISDHDCSLNTTQSFH-------

Query:  ---------RFMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFGASIDG
                 R  S+D   PK IV+K R  LGV+IS+ KAWRAKEHI+K LKGD  ESY+LI  F  KL E  P T TA E D  GHFK+C+MA G+SI+G
Subjt:  ---------RFMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFGASIDG

Query:  WKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        WK +CRP I VDGTFLKCK+ G LLT S+ D NN+ FPLAF+IV SENDASW WFF
Subjt:  WKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like

4.9e-65

51.69

Show/hide

Query:  SSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN
        SSS+ +D +++ +I         DLKEK +  SKE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++H+CS+N
Subjt:  SSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN

Query:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF
          Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D  GHFK+
Subjt:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF

Query:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

A0A5A7UZ18 Protein FAR1-RELATED SEQUENCE 4-like

1.1e-64

51.31

Show/hide

Query:  SSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN
        SSS+ +D +++ +I         DLKEK +  +KE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++H+CS+N
Subjt:  SSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN

Query:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF
          Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D  GHFK+
Subjt:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF

Query:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

A0A5A7VG38 Protein FAR1-RELATED SEQUENCE 4-like

1.9e-64

51.31

Show/hide

Query:  SSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN
        SSS+ +D +++ +I         DLKE  +  SKE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++H+CS+N
Subjt:  SSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN

Query:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF
          Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D  GHFK+
Subjt:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF

Query:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like

4.9e-65

51.69

Show/hide

Query:  SSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN
        SSS+ +D +++ +I         DLKEK +  SKE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++H+CS+N
Subjt:  SSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISDHDCSLN

Query:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF
          Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D  GHFK+
Subjt:  TTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKF

Query:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
        CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  CFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

A0A5D3DJR8 MuDR family transposase

1.3e-65

51.28

Show/hide

Query:  LLNVGSSSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISD
        L ++ SSSS+ +D +++ +I         DLKEK +  SKE++SK F  IA+KNNF F+T  SN +S+EF C Q+ C WY+            LRKYI++
Subjt:  LLNVGSSSSVSND-EVIREICYHG-----DLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYM------------LRKYISD

Query:  HDCSLNTTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDD
        H+CS+N  Q+ H+              F S DRS P  I+   RT LGV++S+ KAWRAKE ++  L G+  ESY+LI +FF KL E  P + TA E D 
Subjt:  HDCSLNTTQSFHR--------------FMSTDRSFPKAIVHKARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDD

Query:  SGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF
         GHFK+CFMA GA I+GWK YCRP ISVDGTFLK K+GG LLT S+ D NNQIFPLAF+IV SENDASW WFF
Subjt:  SGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSENDASWTWFF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49920.1 MuDR family transposase

1.4e-08

35.29

Show/hide

Query:  AKEHIIKILKGDVVESYSLIASFFDKLVE----CIPATCTALEMD-DSGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQI
        AK   IK   GD  +S+ LI      L       +     +L  D +   F+  F AF  SI G++ +CRP+I VD   L  K+   L+  S+ D  NQ 
Subjt:  AKEHIIKILKGDVVESYSLIASFFDKLVE----CIPATCTALEMD-DSGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQI

Query:  FPLAFAIVYSENDASWTWF
        FPLAFA+    +  SW WF
Subjt:  FPLAFAIVYSENDASWTWF

AT1G64260.1 MuDR family transposase

3.6e-12

27.27

Show/hide

Query:  FICLQEGCKWYM------------LRKYISDHDCSLNTTQSFHRFMSTDRSFPKAIVHKARTNLGVSISHQKAW---------------RAKEHIIKILK
        F C++  CKW +            + KY   H CS      F    + D      I    R    +SI+  K W                 K  +IK + 
Subjt:  FICLQEGCKWYM------------LRKYISDHDCSLNTTQSFHRFMSTDRSFPKAIVHKARTNLGVSISHQKAW---------------RAKEHIIKILK

Query:  GDVVESY----SLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSE
        GD  +S+     LI++F       +          D   F+  F +F  SI+G++ +CRP+I VD   L  K+   L+  S  D  N+ FPLAFA+    
Subjt:  GDVVESY----SLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNNQIFPLAFAIVYSE

Query:  NDASWTWFF
        +  SW WFF
Subjt:  NDASWTWFF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTTGTTAAATGTAGGTTCTTCTTCTTCTGTTTCAAATGACGAAGTTATAAGAGAGATTTGTTATCATGGTGATTTAAAGGAAAAAAGTTTATCTGGAAGTAAAGAAGT
TGTTTCAAAGTGTTTTTGCATAATAGCAGTGAAGAATAACTTTCCATTTAGAACTACAGTATCAAATTTGAGGTCTCTTGAATTCATATGTTTGCAAGAAGGGTGCAAAT
GGTATATGCTACGAAAGTACATTTCTGACCATGACTGTTCACTGAATACTACCCAAAGTTTTCACAGGTTCATGTCTACTGATCGTTCCTTTCCAAAAGCGATTGTCCAT
AAGGCTCGTACAAATCTTGGAGTTAGTATAAGTCATCAAAAAGCTTGGAGGGCAAAAGAACACATAATAAAGATATTAAAAGGTGATGTCGTTGAATCGTATTCGTTGAT
TGCAAGCTTTTTTGATAAATTGGTTGAGTGTATCCCAGCTACATGCACTGCTTTAGAGATGGATGATAGTGGTCATTTCAAGTTTTGCTTTATGGCTTTTGGTGCATCAA
TTGATGGGTGGAAATATTATTGTAGACCTATCATTTCTGTTGATGGCACGTTTTTGAAGTGTAAGTTTGGTGGCATCCTATTAACAGTCTCATCACAAGATGTGAACAAT
CAAATTTTTCCTCTTGCTTTTGCTATTGTATATTCTGAAAATGATGCATCATGGACATGGTTTTTTTAG

mRNA sequence

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Protein sequence

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MLLNVGSSSSVSNDEVIREICYHGDLKEKSLSGSKEVVSKCFCIIAVKNNFPFRTTVSNLRSLEFICLQEGCKWYMLRKYISDHDCSLNTTQSFHRFMSTDRSFPKAIVH
KARTNLGVSISHQKAWRAKEHIIKILKGDVVESYSLIASFFDKLVECIPATCTALEMDDSGHFKFCFMAFGASIDGWKYYCRPIISVDGTFLKCKFGGILLTVSSQDVNN
QIFPLAFAIVYSENDASWTWFF

PI0010324 (gene) of Melon (PI 482460) v1 genome