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PI0010346 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010346
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPolyprotein
Genome locationchr10:837667..838982
RNA-Seq ExpressionPI0010346
SyntenyPI0010346
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]2.1e-4371.74Show/hide
Query:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV
        R R +STSSKG   SSS N  PSPMSA QY M+LGFT VTRS+ R S I I SPTESSTPPRPS NL+RPSGG+ QMRPPA   SN ESST PTTYSQAV
Subjt:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV

Query:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDE
          +KRF+PRPEIK+YF+K + +YDPIIEPEYQSLTL+E
Subjt:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDE

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]1.3e-4369.23Show/hide
Query:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV
        R R +STSSKG+ LSSS N APSPMSADQYAM+LGFT VTRS+ R SGI I  PTESSTPPRPSANL+RP G + QM+PPA   SN +SST PTTYSQAV
Subjt:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV

Query:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATI
         P+KRF+PRP+IK YF+K + +YDP IE EYQSLTL+E  + I
Subjt:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATI

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]2.5e-4470.63Show/hide
Query:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV
        R R +STSSKG+   SS N APSP+SADQYAM+LGFTTVTR   RS GI I SPTESSTPPRPS NL+RPS G+ QMRPPA   SN ESST PTTYSQAV
Subjt:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV

Query:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATI
         P+KRF+PRPEIK+YF+K + +YDPIIE EYQSLT +ET + I
Subjt:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATI

KAA0066384.1 hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa]1.3e-4552.63Show/hide
Query:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV
        R R +STSSKG+H SSS N APSP  ADQYAME+GFTTVTRS+ RSS IRI S TES+TPPRPS NL+ PS G+ QMRPPA   SN ESST  TTYSQAV
Subjt:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV

Query:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVKASSS
         P+KRF+PRPEIK+YF+K + +YDPIIE EYQ                                                              + ASSS
Subjt:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVKASSS

Query:  SKSASSSIQEDEELASPEYDLNDSFLDS
        SKS SSSIQEDEE   PEYDL+D FLDS
Subjt:  SKSASSSIQEDEELASPEYDLNDSFLDS

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]2.3e-6163.76Show/hide
Query:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV
        R R +STSSKG+  SSS N APSPMS DQYAM+LG+TTV +S+ +SSGI I SP ESSTPPRPS NL+ P G + QMR  A   SN ESST PTTYSQAV
Subjt:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV

Query:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVKASSS
         P+K+F+PR EIK+YF+K + IYDPIIE EYQ                   +NG LQD+DQ+KNA+FLNDK K LAAL QAT DADFQRLLSTAV  SSS
Subjt:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVKASSS

Query:  SKSASSSIQEDEELASPEYDLNDSFLDSQ
        SK A S IQEDEE    EYDL+D FLDSQ
Subjt:  SKSASSSIQEDEELASPEYDLNDSFLDSQ

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein1.2e-4470.63Show/hide
Query:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV
        R R +STSSKG+   SS N APSP+SADQYAM+LGFTTVTR   RS GI I SPTESSTPPRPS NL+RPS G+ QMRPPA   SN ESST PTTYSQAV
Subjt:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV

Query:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATI
         P+KRF+PRPEIK+YF+K + +YDPIIE EYQSLT +ET + I
Subjt:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATI

A0A5D3BI61 Uncharacterized protein1.1e-6163.76Show/hide
Query:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV
        R R +STSSKG+  SSS N APSPMS DQYAM+LG+TTV +S+ +SSGI I SP ESSTPPRPS NL+ P G + QMR  A   SN ESST PTTYSQAV
Subjt:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV

Query:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVKASSS
         P+K+F+PR EIK+YF+K + IYDPIIE EYQ                   +NG LQD+DQ+KNA+FLNDK K LAAL QAT DADFQRLLSTAV  SSS
Subjt:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVKASSS

Query:  SKSASSSIQEDEELASPEYDLNDSFLDSQ
        SK A S IQEDEE    EYDL+D FLDSQ
Subjt:  SKSASSSIQEDEELASPEYDLNDSFLDSQ

A0A5D3BPD3 Uncharacterized protein6.5e-4652.63Show/hide
Query:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV
        R R +STSSKG+H SSS N APSP  ADQYAME+GFTTVTRS+ RSS IRI S TES+TPPRPS NL+ PS G+ QMRPPA   SN ESST  TTYSQAV
Subjt:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV

Query:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVKASSS
         P+KRF+PRPEIK+YF+K + +YDPIIE EYQ                                                              + ASSS
Subjt:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVKASSS

Query:  SKSASSSIQEDEELASPEYDLNDSFLDS
        SKS SSSIQEDEE   PEYDL+D FLDS
Subjt:  SKSASSSIQEDEELASPEYDLNDSFLDS

A0A5D3E4J4 Uncharacterized protein6.1e-4469.23Show/hide
Query:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV
        R R +STSSKG+ LSSS N APSPMSADQYAM+LGFT VTRS+ R SGI I  PTESSTPPRPSANL+RP G + QM+PPA   SN +SST PTTYSQAV
Subjt:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV

Query:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATI
         P+KRF+PRP+IK YF+K + +YDP IE EYQSLTL+E  + I
Subjt:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATI

E5GCE6 Uncharacterized protein1.0e-4371.74Show/hide
Query:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV
        R R +STSSKG   SSS N  PSPMSA QY M+LGFT VTRS+ R S I I SPTESSTPPRPS NL+RPSGG+ QMRPPA   SN ESST PTTYSQAV
Subjt:  RERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAV

Query:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDE
          +KRF+PRPEIK+YF+K + +YDPIIEPEYQSLTL+E
Subjt:  APEKRFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATTGTGCGAGGCAGAGAAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCACCTATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGAGTTGGGGTTTACTACAGTAACCCGATCTAAAGTAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTGCCTATTCTTTATCAAATTTGGAGTCATCAACTTCTCCCACAACATATTCTCAGGCCGTCGCTCCCGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTAAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAGAATATCAAAGTCTCACTCTCGATGAGACACATGC
CACTATTAAACACATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGACCTCGATCAGAAAAAGAACGCAGAGTTCTTGAATGATAAATCAAAACTACTTGCAGCAC
TGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTATTATCAACGGCAGTAAAGGCCTCTTCAAGCTCAAAATCAGCGTCTTCCTCCATACAGGAAGATGAGGAATTG
GCAAGCCCGGAGTACGATCTAAATGATTCGTTCCTCGACTCACAATCTATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTATTGTGCGAGGCAGAGAAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCACCTATCTTCTTCACAAAATCCTGCACCCTCACCTATGAGTGCAGATCAATATGC
AATGGAGTTGGGGTTTACTACAGTAACCCGATCTAAAGTAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCGTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTGCCTATTCTTTATCAAATTTGGAGTCATCAACTTCTCCCACAACATATTCTCAGGCCGTCGCTCCCGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTAAAAAACAAGTGGCAATCTATGATCCTATCATAGAGCCAGAATATCAAAGTCTCACTCTCGATGAGACACATGC
CACTATTAAACACATGAAAGAGTGGTTCGCAGAGAACGGCTATCTTCAAGACCTCGATCAGAAAAAGAACGCAGAGTTCTTGAATGATAAATCAAAACTACTTGCAGCAC
TGGCACAGGCAACAACTGATGCCGATTTTCAAAGATTATTATCAACGGCAGTAAAGGCCTCTTCAAGCTCAAAATCAGCGTCTTCCTCCATACAGGAAGATGAGGAATTG
GCAAGCCCGGAGTACGATCTAAATGATTCGTTCCTCGACTCACAATCTATGTGA
Protein sequenceShow/hide protein sequence
MSIVRGRERVSSTSSKGSHLSSSQNPAPSPMSADQYAMELGFTTVTRSKVRSSGIRIESPTESSTPPRPSANLVRPSGGITQMRPPAYSLSNLESSTSPTTYSQAVAPEK
RFIPRPEIKTYFKKQVAIYDPIIEPEYQSLTLDETHATIKHMKEWFAENGYLQDLDQKKNAEFLNDKSKLLAALAQATTDADFQRLLSTAVKASSSSKSASSSIQEDEEL
ASPEYDLNDSFLDSQSM