CuGenDBv2

Gene ID	PI0010360
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Nuclear transcription factor Y subunit B-3
Genome location	chr11:18941711..18942244
RNA-Seq Expression	PI0010360
Synteny	PI0010360
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0060802.1 uncharacterized protein E6C27_scaffold137G00220 [Cucumis melo var. makuwa]

1.0e-82

90.32

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Query:  MSMLYFSISKRNSLPIQKFVQ---------EEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDD
        MSMLYFSISKR+SLPIQKFVQ         EEE+EEDQKELTFFSDHLKSSSASAPTT DLLS+SECADDNFTTTEESEVEWPYFDH+FYKAR+PHRSDD
Subjt:  MSMLYFSISKRNSLPIQKFVQ---------EEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDD

Query:  GSISDEESLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        GSISDEESLIEIALPTGHYVS KFDDVDEDEDEDD  FRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  GSISDEESLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

TYK11971.1 uncharacterized protein E5676_scaffold177G001550 [Cucumis melo var. makuwa]

1.6e-83

93.85

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Query:  MSMLYFSISKRNSLPIQKFV--QEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDEE
        MSMLYFSISKR+SLPIQKFV  QEEE+EEDQKELTFFSDHLKSSSASAPTT DLLS+SECADDNFTTTEESEVEWPYFDH+FYKAR+PHRSDDGSISDEE
Subjt:  MSMLYFSISKRNSLPIQKFV--QEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDEE

Query:  SLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SLIEIALPTGHYVS KFDDVDEDEDEDD  FRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_008464163.1 PREDICTED: uncharacterized protein LOC103502111 [Cucumis melo]

1.6e-83

93.85

Show/hide

Query:  MSMLYFSISKRNSLPIQKFV--QEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDEE
        MSMLYFSISKR+SLPIQKFV  QEEE+EEDQKELTFFSDHLKSSSASAPTT DLLS+SECADDNFTTTEESEVEWPYFDH+FYKAR+PHRSDDGSISDEE
Subjt:  MSMLYFSISKRNSLPIQKFV--QEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDEE

Query:  SLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SLIEIALPTGHYVS KFDDVDEDEDEDD  FRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_011656887.2 uncharacterized protein LOC105435780 [Cucumis sativus]

4.0e-79

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Query:  MSMLYFSISKRNSLPIQKFVQ---EEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDE
        MSMLYFSISKRNSLPI+KFVQ   EEE+EEDQK+LTFFSDHLKSSSASAPT  DLLS+SECADDNFTTTEESEVEWPYFDH+F K RNPHRSDDGSISDE
Subjt:  MSMLYFSISKRNSLPIQKFVQ---EEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDE

Query:  ESLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        ESLIEIALPTGHYVS KFDDV  DEDEDD+SFRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  ESLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_038902685.1 uncharacterized protein LOC120089322 [Benincasa hispida]

5.6e-81

92.22

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Query:  MSMLYFSISKRNSLPIQKF---VQEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDE
        MSMLYFSISKRNSLPIQKF   VQEEE+EEDQK+LTFFSDHLKSSS SAPTTGDLLS+SECADDNFTTTEESEVEWPYFDH+ YK  NP RSDDGSISDE
Subjt:  MSMLYFSISKRNSLPIQKF---VQEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDE

Query:  ESLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        ESLIEIALPTGHYVSHKFDDVD DEDED MSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  ESLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCP7 Uncharacterized protein

4.7e-81

91.53

Show/hide

Query:  MSMLYFSISKRNSLPIQKFVQEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDEESL
        MSMLYFSISKRNSLPI+KFVQEEE+EEDQK+LTFFSDHLKSSSASAPT  DLLS+SECADDNFTTTEESEVEWPYFDH+F K RNPHRSDDGSISDEESL
Subjt:  MSMLYFSISKRNSLPIQKFVQEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDEESL

Query:  IEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        IEIALPTGHYVS KFDDV  DEDEDD+SFRYQKL+DFQ+KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  IEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A1S3CMD0 uncharacterized protein LOC103502111

7.7e-84

93.85

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Query:  MSMLYFSISKRNSLPIQKFV--QEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDEE
        MSMLYFSISKR+SLPIQKFV  QEEE+EEDQKELTFFSDHLKSSSASAPTT DLLS+SECADDNFTTTEESEVEWPYFDH+FYKAR+PHRSDDGSISDEE
Subjt:  MSMLYFSISKRNSLPIQKFV--QEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDEE

Query:  SLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SLIEIALPTGHYVS KFDDVDEDEDEDD  FRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A5A7UY43 Uncharacterized protein

5.0e-83

90.32

Show/hide

Query:  MSMLYFSISKRNSLPIQKFVQ---------EEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDD
        MSMLYFSISKR+SLPIQKFVQ         EEE+EEDQKELTFFSDHLKSSSASAPTT DLLS+SECADDNFTTTEESEVEWPYFDH+FYKAR+PHRSDD
Subjt:  MSMLYFSISKRNSLPIQKFVQ---------EEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDD

Query:  GSISDEESLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        GSISDEESLIEIALPTGHYVS KFDDVDEDEDEDD  FRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  GSISDEESLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A5D3CJH9 Uncharacterized protein

7.7e-84

93.85

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Query:  MSMLYFSISKRNSLPIQKFV--QEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDEE
        MSMLYFSISKR+SLPIQKFV  QEEE+EEDQKELTFFSDHLKSSSASAPTT DLLS+SECADDNFTTTEESEVEWPYFDH+FYKAR+PHRSDDGSISDEE
Subjt:  MSMLYFSISKRNSLPIQKFV--QEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDEE

Query:  SLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SLIEIALPTGHYVS KFDDVDEDEDEDD  FRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A6J1CG35 uncharacterized protein LOC111011203

1.4e-61

79.89

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Query:  MSMLYFSISKRNSL------PIQKFVQEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSI
        MSMLYF+ISKRNSL      PI+KFV+EEE EE + E++F SD  K SSASAP TGDLLS+SECADDNFTTTEESEVEWP+ D     A NP RS DGSI
Subjt:  MSMLYFSISKRNSL------PIQKFVQEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSI

Query:  SDEESLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQK-KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SDEESLIEIALPTGHYVSHKFDD +EDEDEDDMSF  QKLSDFQK KNLVE+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SDEESLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQK-KNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G04480.1 unknown protein

2.7e-17

52.27

Show/hide

Query:  DDGSISDEESLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        DDG+I D+ESLIE++LP+GHY+ H ++         +  + + K+ DF+   L ++L EIND  EE+NLIEIDIS+GSIKYSRFEI+A
Subjt:  DDGSISDEESLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

AT5G35870.1 unknown protein

8.3e-14

48.86

Show/hide

Query:  DDGSISDEESLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        DDG+I DEESLIE++LP+GHY+ H +  +   +D+  M   Y  + DF+   L+++ AE     E++NLIEIDIS+GSIK SRF+I+A
Subjt:  DDGSISDEESLIEIALPTGHYVSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCTATGCTTTATTTCTCAATCTCCAAAAGAAATTCACTTCCTATTCAGAAATTTGTACAAGAAGAAGAAAAAGAAGAAGATCAGAAAGAACTGACCTTTTTTTCTGA
TCACTTGAAATCCTCGTCGGCGTCAGCTCCAACGACCGGAGACTTGCTTTCAGATAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGC
CGTACTTTGACCATCAGTTCTATAAAGCCAGAAACCCGCACCGGTCTGATGACGGTTCGATTTCCGACGAGGAAAGTTTGATTGAAATCGCTCTCCCGACCGGACATTAC
GTAAGCCATAAGTTTGATGACGTCGACGAGGACGAGGACGAGGACGACATGTCGTTTCGTTACCAGAAATTGTCGGATTTTCAAAAGAAGAATCTTGTGGAGGTGTTGGC
TGAAATTAACGACATCAACGAGGAGGAGAATTTGATCGAGATCGACATATCGATGGGCTCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAA

mRNA sequence

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Protein sequence

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MSMLYFSISKRNSLPIQKFVQEEEKEEDQKELTFFSDHLKSSSASAPTTGDLLSDSECADDNFTTTEESEVEWPYFDHQFYKARNPHRSDDGSISDEESLIEIALPTGHY
VSHKFDDVDEDEDEDDMSFRYQKLSDFQKKNLVEVLAEINDINEEENLIEIDISMGSIKYSRFEIEA

PI0010360 (gene) of Melon (PI 482460) v1 genome