; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0010383 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010383
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr04:24108312..24108566
RNA-Seq ExpressionPI0010383
SyntenyPI0010383
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035756.1 gag/pol protein [Cucumis melo var. makuwa]4.5e-2877.11Show/hide
Query:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQG
        MG GK+VEAN+AT +K+ + GSSSKT+VGPSQ+K KGK KTPK  KGKKVAKGKCYHCN+ GHWLRNCPKYLA KK+EKEAQG
Subjt:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQG

KAA0038365.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-2573.81Show/hide
Query:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQGN
        MG GK+VEAN ATT+K+ + GSSSKTKVG   MK K  RKTP   +GKKVAKGKCYHCN+NGHWLRNC KYLA KK+EKEAQGN
Subjt:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQGN

KAA0042102.1 gag/pol protein [Cucumis melo var. makuwa]2.7e-2574.16Show/hide
Query:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPS----QMKNKGKRKTPKIGKGKKVA-KGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQGN
        MG GKQVEANVATTK+KF +GSSS TK GPS    Q+K KGK KTPK  KGKK A KGKCYHC QNGHWLRNCPKYL  KK EK+ QGN
Subjt:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPS----QMKNKGKRKTPKIGKGKKVA-KGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQGN

KAA0045181.1 gag/pol protein [Cucumis melo var. makuwa]1.6e-2573.49Show/hide
Query:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQG
        MG GK+VEANVATT+K+ ++GSSSKT+VGPSQ+K K K K PK  KGKKVAKGKCYHCN++ HWL+NC KYLA KK+EKEAQG
Subjt:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQG

TYK29862.1 gag/pol protein [Cucumis melo var. makuwa]2.0e-2877.11Show/hide
Query:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQG
        MG GK+VEAN+ATT+K+ + GSSSKT+VGPSQ+K KGK KTPK  KGKKVAKGKCYHCN++GHWLRNCP+YLA KK+EKEAQG
Subjt:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQG

TrEMBL top hitse value%identityAlignment
A0A5A7T0L9 Gag/pol protein2.2e-2877.11Show/hide
Query:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQG
        MG GK+VEAN+AT +K+ + GSSSKT+VGPSQ+K KGK KTPK  KGKKVAKGKCYHCN+ GHWLRNCPKYLA KK+EKEAQG
Subjt:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQG

A0A5A7TAG4 Gag/pol protein1.0e-2573.81Show/hide
Query:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQGN
        MG GK+VEAN ATT+K+ + GSSSKTKVG   MK K  RKTP   +GKKVAKGKCYHCN+NGHWLRNC KYLA KK+EKEAQGN
Subjt:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQGN

A0A5A7TF90 Gag/pol protein1.3e-2574.16Show/hide
Query:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPS----QMKNKGKRKTPKIGKGKKVA-KGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQGN
        MG GKQVEANVATTK+KF +GSSS TK GPS    Q+K KGK KTPK  KGKK A KGKCYHC QNGHWLRNCPKYL  KK EK+ QGN
Subjt:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPS----QMKNKGKRKTPKIGKGKKVA-KGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQGN

A0A5A7TUI5 Gag/pol protein7.7e-2673.49Show/hide
Query:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQG
        MG GK+VEANVATT+K+ ++GSSSKT+VGPSQ+K K K K PK  KGKKVAKGKCYHCN++ HWL+NC KYLA KK+EKEAQG
Subjt:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQG

A0A5D3E1U5 Gag/pol protein9.7e-2977.11Show/hide
Query:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQG
        MG GK+VEAN+ATT+K+ + GSSSKT+VGPSQ+K KGK KTPK  KGKKVAKGKCYHCN++GHWLRNCP+YLA KK+EKEAQG
Subjt:  MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATGGGAAAGCAAGTGGAAGCAAATGTTGCTACCACTAAGAAAAAGTTTATAAAAGGATCGTCCTCTAAAACTAAAGTTGGGCCTTCACAAATGAAAAATAAGGG
AAAGAGGAAGACTCCCAAGATTGGTAAGGGAAAGAAAGTTGCGAAAGGTAAATGTTACCACTGCAACCAAAACGGGCATTGGTTAAGGAATTGCCCGAAGTACCTTGCTG
TGAAGAAATCTGAGAAGGAAGCACAAGGAAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTATGGGAAAGCAAGTGGAAGCAAATGTTGCTACCACTAAGAAAAAGTTTATAAAAGGATCGTCCTCTAAAACTAAAGTTGGGCCTTCACAAATGAAAAATAAGGG
AAAGAGGAAGACTCCCAAGATTGGTAAGGGAAAGAAAGTTGCGAAAGGTAAATGTTACCACTGCAACCAAAACGGGCATTGGTTAAGGAATTGCCCGAAGTACCTTGCTG
TGAAGAAATCTGAGAAGGAAGCACAAGGAAACTAG
Protein sequenceShow/hide protein sequence
MGMGKQVEANVATTKKKFIKGSSSKTKVGPSQMKNKGKRKTPKIGKGKKVAKGKCYHCNQNGHWLRNCPKYLAVKKSEKEAQGN