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PI0010405 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010405
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr02:13309926..13310625
RNA-Seq ExpressionPI0010405
SyntenyPI0010405
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066251.1 uncharacterized protein E6C27_scaffold21G002810 [Cucumis melo var. makuwa]4.1e-1664.62Show/hide
Query:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEV
        MIQNT QF  HP +DPH++I SFYSI  SFHM GI  +EL+FA FP T+ DEAKRWAN+L+ G+V
Subjt:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEV

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]8.0e-1246.27Show/hide
Query:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEVGT
        M+Q  GQFGG   EDPH H++SF  IC++F M G+  + ++   FP +LRDEA++WA + + GE+ T
Subjt:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEVGT

XP_030478190.1 uncharacterized protein LOC115695250 [Cannabis sativa]8.0e-1252.31Show/hide
Query:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEV
        M+Q  GQFGG P EDPH HIRSF  +  SF +QG+S E L+   FP +LRD A+ W N L    V
Subjt:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEV

XP_038896560.1 uncharacterized protein LOC120084813 [Benincasa hispida]5.0e-1455.38Show/hide
Query:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEV
        MIQN G+FGG   EDPH H+ SF  IC++F + G++PEEL+   FP TLRDEA+RWA +L+  E+
Subjt:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEV

XP_038896595.1 uncharacterized protein LOC120084850 [Benincasa hispida]3.6e-1250.77Show/hide
Query:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEV
        MIQN G+FGG   EDPH H+  F  IC +F +  +SPE ++   FP TLRDEA+RWA +L+  E+
Subjt:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEV

TrEMBL top hitse value%identityAlignment
A0A5A7TNS8 Uncharacterized protein9.6e-1141.56Show/hide
Query:  PSWGPSEDVLRDRVL-MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQ
        P++G +   ++  +L MIQ T QFGG+  EDP +HI+S Y +C+SFH+  +S E+L   +F  TL+D+ K+W   L+
Subjt:  PSWGPSEDVLRDRVL-MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQ

A0A5A7V2U7 Putative disease resistance RPP13-like protein 13.6e-1068.09Show/hide
Query:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPL
        +IQN GQF  HPR+DPH++IR+FYSIC SFHM GIS EEL+F  F L
Subjt:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPL

A0A5D3BCV5 Uncharacterized protein2.0e-1664.62Show/hide
Query:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEV
        MIQNT QF  HP +DPH++I SFYSI  SFHM GI  +EL+FA FP T+ DEAKRWAN+L+ G+V
Subjt:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEV

U5CUI2 Retrotrans_gag domain-containing protein9.6e-1149.23Show/hide
Query:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEV
        M+Q  GQF G P EDPH H+RSF  +  SF +QG+S E L+   FP +LRD A+ W N L    V
Subjt:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEV

U5CUK7 Uncharacterized protein5.1e-1252.31Show/hide
Query:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEV
        M+Q  GQFGG P EDPH HIRSF  +  SF +QG+S E L+   FP +LRD A+ W N L    V
Subjt:  MIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTCAGCTTCCCGCCGTCGTGGGGGCCTAGTGAAGATGTGCTTCGGGATAGAGTATTGATGATTCAGAACACCGGACAATTCGGCGGTCACCCTAGGGAGGATCC
ACACGAGCATATTAGGAGTTTTTACTCCATCTGCACTTCCTTCCATATGCAAGGCATCTCACCTGAAGAATTGAAATTCGCTTTCTTCCCATTAACTCTGAGGGACGAGG
CGAAGAGGTGGGCCAACGCCTTGCAAGATGGCGAGGTGGGAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGTCAGCTTCCCGCCGTCGTGGGGGCCTAGTGAAGATGTGCTTCGGGATAGAGTATTGATGATTCAGAACACCGGACAATTCGGCGGTCACCCTAGGGAGGATCC
ACACGAGCATATTAGGAGTTTTTACTCCATCTGCACTTCCTTCCATATGCAAGGCATCTCACCTGAAGAATTGAAATTCGCTTTCTTCCCATTAACTCTGAGGGACGAGG
CGAAGAGGTGGGCCAACGCCTTGCAAGATGGCGAGGTGGGAACATGA
Protein sequenceShow/hide protein sequence
MSVSFPPSWGPSEDVLRDRVLMIQNTGQFGGHPREDPHEHIRSFYSICTSFHMQGISPEELKFAFFPLTLRDEAKRWANALQDGEVGT