; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0010504 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010504
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Genome locationchr07:17529911..17531201
RNA-Seq ExpressionPI0010504
SyntenyPI0010504
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053603.1 uncharacterized protein E6C27_scaffold190G001780 [Cucumis melo var. makuwa]9.6e-2435.66Show/hide
Query:  LKRNHTTQTTPPTNSPPPVNQPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVS
        L  N      P  NS     +P  NS P   S  P  +P  K K      + I+ K+GR+K+  +++ VPIDG+SFH +  V +W YVVQ  IADE  V 
Subjt:  LKRNHTTQTTPPTNSPPPVNQPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVS

Query:  DDHHSCIAIMTLISQAKL--------------------------CPLCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLE
        D  HS ++++ LI +A L                            L   LN  IL PN+AP P    L LSYRLFQGSHVP+IEH +R   + ++   +
Subjt:  DDHHSCIAIMTLISQAKL--------------------------CPLCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLE

Query:  DLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDSIVSSIRLLIPSS
        D+     G  +   +A++I++  ++ES++LS  I+ L+ RR  +DS+V  ++ LIPSS
Subjt:  DLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDSIVSSIRLLIPSS

KAA0065524.1 gag/pol protein [Cucumis melo var. makuwa]4.0e-3041.98Show/hide
Query:  QPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCIAIMTLISQAKLCP
        +P  N    P +   P    PK K      + I+TK+ R+K+P ++  VPIDG+SFH E  V +WKYVVQRRIADE  +SD HHSC++IM LI +A L  
Subjt:  QPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCIAIMTLISQAKLCP

Query:  LCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLEDLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDS
        L            +AP P P  L LSYRLFQGSHV DIEH ++      +   EDL     G  +   +A++IV+ L++ESR+LS  I+  +ERR  +D 
Subjt:  LCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLEDLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDS

Query:  IVSSIRLLIPSS
         +  ++ L PS+
Subjt:  IVSSIRLLIPSS

TYK19190.1 uncharacterized protein E5676_scaffold522G001260 [Cucumis melo var. makuwa]7.3e-2436.05Show/hide
Query:  LKRNHTTQTTPPTNSPPPVNQPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVS
        L  N      P  NS     +P  NS P   S  P  +P  K K      + I+ K+GR+K+  +++ VPIDG+SFH +  V +W YVVQ  IADE  V 
Subjt:  LKRNHTTQTTPPTNSPPPVNQPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVS

Query:  DDHHSCIAIMTLISQAKL--------------------------CPLCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLE
        D  HS ++++ LI +A L                            L   LN  IL PN+AP P    L LSYRLFQGSHVP+IEH +R   + ++   +
Subjt:  DDHHSCIAIMTLISQAKL--------------------------CPLCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLE

Query:  DLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDSIVSSIRLLIPSS
        D+     G  +   +A++I++ L +ES++LS  I+ L+ RR  +DS+V  ++ LIPSS
Subjt:  DLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDSIVSSIRLLIPSS

TYK27300.1 envelope-like protein [Cucumis melo var. makuwa]1.1e-2236.21Show/hide
Query:  VNQPAPNSVPSPNSPPPPPQPTPKVKNKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCIAIMTLISQAK------
        V+Q A     S  + P P +   +   + I+TK+ ++KVPL++  +PIDG+SFH E  V +WK+VVQRRIADE  +SD HHSC++I+ LI +A+      
Subjt:  VNQPAPNSVPSPNSPPPPPQPTPKVKNKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCIAIMTLISQAK------

Query:  ----LCPLCPTLNRSILHPNEAPSPSPSKLQLS---------YRLF---QGSHVPDIEHSLRHPSS-VNLPHLEDLRTPNGGLLLPPPIANQIVHALSSE
            +  +  ++  +IL+     +  PS    S         YR+    +GSHVPDI+H L HPS    L    D      G  +   +A++I++AL++E
Subjt:  ----LCPLCPTLNRSILHPNEAPSPSPSKLQLS---------YRLF---QGSHVPDIEHSLRHPSS-VNLPHLEDLRTPNGGLLLPPPIANQIVHALSSE

Query:  SRSLSGIIHDLTERRRLIDSIVSSIRLLIPSS
        S SLS +I  L+E R  IDS++  ++   PSS
Subjt:  SRSLSGIIHDLTERRRLIDSIVSSIRLLIPSS

TYK29294.1 gag/pol protein [Cucumis melo var. makuwa]4.0e-3041.98Show/hide
Query:  QPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCIAIMTLISQAKLCP
        +P  N    P +   P    PK K      + I+TK+ R+K+P ++  VPIDG+SFH E  V +WKYVVQRRIADE  +SD HHSC++IM LI +A L  
Subjt:  QPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCIAIMTLISQAKLCP

Query:  LCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLEDLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDS
        L            +AP P P  L LSYRLFQGSHV DIEH ++      +   EDL     G  +   +A++IV+ L++ESR+LS  I+  +ERR  +D 
Subjt:  LCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLEDLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDS

Query:  IVSSIRLLIPSS
         +  ++ L PS+
Subjt:  IVSSIRLLIPSS

TrEMBL top hitse value%identityAlignment
A0A5A7UCJ0 Uncharacterized protein4.6e-2435.66Show/hide
Query:  LKRNHTTQTTPPTNSPPPVNQPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVS
        L  N      P  NS     +P  NS P   S  P  +P  K K      + I+ K+GR+K+  +++ VPIDG+SFH +  V +W YVVQ  IADE  V 
Subjt:  LKRNHTTQTTPPTNSPPPVNQPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVS

Query:  DDHHSCIAIMTLISQAKL--------------------------CPLCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLE
        D  HS ++++ LI +A L                            L   LN  IL PN+AP P    L LSYRLFQGSHVP+IEH +R   + ++   +
Subjt:  DDHHSCIAIMTLISQAKL--------------------------CPLCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLE

Query:  DLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDSIVSSIRLLIPSS
        D+     G  +   +A++I++  ++ES++LS  I+ L+ RR  +DS+V  ++ LIPSS
Subjt:  DLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDSIVSSIRLLIPSS

A0A5A7VE22 Gag/pol protein1.9e-3041.98Show/hide
Query:  QPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCIAIMTLISQAKLCP
        +P  N    P +   P    PK K      + I+TK+ R+K+P ++  VPIDG+SFH E  V +WKYVVQRRIADE  +SD HHSC++IM LI +A L  
Subjt:  QPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCIAIMTLISQAKLCP

Query:  LCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLEDLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDS
        L            +AP P P  L LSYRLFQGSHV DIEH ++      +   EDL     G  +   +A++IV+ L++ESR+LS  I+  +ERR  +D 
Subjt:  LCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLEDLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDS

Query:  IVSSIRLLIPSS
         +  ++ L PS+
Subjt:  IVSSIRLLIPSS

A0A5D3D6T2 Uncharacterized protein3.6e-2436.05Show/hide
Query:  LKRNHTTQTTPPTNSPPPVNQPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVS
        L  N      P  NS     +P  NS P   S  P  +P  K K      + I+ K+GR+K+  +++ VPIDG+SFH +  V +W YVVQ  IADE  V 
Subjt:  LKRNHTTQTTPPTNSPPPVNQPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVS

Query:  DDHHSCIAIMTLISQAKL--------------------------CPLCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLE
        D  HS ++++ LI +A L                            L   LN  IL PN+AP P    L LSYRLFQGSHVP+IEH +R   + ++   +
Subjt:  DDHHSCIAIMTLISQAKL--------------------------CPLCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLE

Query:  DLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDSIVSSIRLLIPSS
        D+     G  +   +A++I++ L +ES++LS  I+ L+ RR  +DS+V  ++ LIPSS
Subjt:  DLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDSIVSSIRLLIPSS

A0A5D3DVJ2 Envelope-like protein5.1e-2336.21Show/hide
Query:  VNQPAPNSVPSPNSPPPPPQPTPKVKNKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCIAIMTLISQAK------
        V+Q A     S  + P P +   +   + I+TK+ ++KVPL++  +PIDG+SFH E  V +WK+VVQRRIADE  +SD HHSC++I+ LI +A+      
Subjt:  VNQPAPNSVPSPNSPPPPPQPTPKVKNKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCIAIMTLISQAK------

Query:  ----LCPLCPTLNRSILHPNEAPSPSPSKLQLS---------YRLF---QGSHVPDIEHSLRHPSS-VNLPHLEDLRTPNGGLLLPPPIANQIVHALSSE
            +  +  ++  +IL+     +  PS    S         YR+    +GSHVPDI+H L HPS    L    D      G  +   +A++I++AL++E
Subjt:  ----LCPLCPTLNRSILHPNEAPSPSPSKLQLS---------YRLF---QGSHVPDIEHSLRHPSS-VNLPHLEDLRTPNGGLLLPPPIANQIVHALSSE

Query:  SRSLSGIIHDLTERRRLIDSIVSSIRLLIPSS
        S SLS +I  L+E R  IDS++  ++   PSS
Subjt:  SRSLSGIIHDLTERRRLIDSIVSSIRLLIPSS

A0A5D3E0G7 Gag/pol protein1.9e-3041.98Show/hide
Query:  QPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCIAIMTLISQAKLCP
        +P  N    P +   P    PK K      + I+TK+ R+K+P ++  VPIDG+SFH E  V +WKYVVQRRIADE  +SD HHSC++IM LI +A L  
Subjt:  QPAPNSVPSPNSPPPPPQPTPKVK-----NKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKYVVQRRIADESEVSDDHHSCIAIMTLISQAKLCP

Query:  LCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLEDLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDS
        L            +AP P P  L LSYRLFQGSHV DIEH ++      +   EDL     G  +   +A++IV+ L++ESR+LS  I+  +ERR  +D 
Subjt:  LCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLEDLRTPNGGLLLPPPIANQIVHALSSESRSLSGIIHDLTERRRLIDS

Query:  IVSSIRLLIPSS
         +  ++ L PS+
Subjt:  IVSSIRLLIPSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTGCCTCTTCGTCTTCGTCATTGTCTTCGTCTTCATCTTCGTCGTTCCTCTCAGGATCACACTCCTTTGGCTCGTTTACTTAAACGAAATCACACTACTCAAAC
TACTCCTCCTACCAATAGTCCTCCTCCTGTTAATCAGCCTGCCCCTAATTCAGTCCCCTCACCCAATTCTCCTCCACCTCCTCCACAACCTACACCTAAAGTCAAAAACA
AAAGAATCTCCACCAAGTCTGGTAGGAGAAAAGTTCCTCTCCACGTTACTCCTGTCCCCATTGATGGTCTATCTTTCCATCATGAAGCTCATGTCCACAAATGGAAATAT
GTGGTTCAAAGAAGGATTGCGGATGAGTCTGAAGTTTCTGATGATCATCATTCCTGTATTGCCATTATGACCCTGATATCTCAAGCTAAACTTTGTCCACTGTGTCCAAC
CTTGAACCGTTCCATTCTTCATCCTAATGAGGCCCCTAGTCCTTCTCCTTCCAAGCTTCAGTTGAGCTATCGTTTGTTTCAAGGATCTCATGTCCCTGACATTGAGCACT
CTCTTCGCCATCCATCTTCTGTCAATCTTCCCCACCTTGAAGATCTAAGAACCCCTAATGGTGGCTTGCTGCTTCCTCCTCCAATTGCAAATCAAATAGTTCATGCCTTA
TCTTCTGAGTCCAGAAGTCTCAGTGGGATCATTCATGATCTTACTGAAAGAAGAAGGCTTATTGATTCAATAGTCTCTTCAATTCGGCTGTTGATTCCTTCTTCTGAGGA
AGCTCCTGAGATCAATTCTACTTCTAAGGATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTGCCTCTTCGTCTTCGTCATTGTCTTCGTCTTCATCTTCGTCGTTCCTCTCAGGATCACACTCCTTTGGCTCGTTTACTTAAACGAAATCACACTACTCAAAC
TACTCCTCCTACCAATAGTCCTCCTCCTGTTAATCAGCCTGCCCCTAATTCAGTCCCCTCACCCAATTCTCCTCCACCTCCTCCACAACCTACACCTAAAGTCAAAAACA
AAAGAATCTCCACCAAGTCTGGTAGGAGAAAAGTTCCTCTCCACGTTACTCCTGTCCCCATTGATGGTCTATCTTTCCATCATGAAGCTCATGTCCACAAATGGAAATAT
GTGGTTCAAAGAAGGATTGCGGATGAGTCTGAAGTTTCTGATGATCATCATTCCTGTATTGCCATTATGACCCTGATATCTCAAGCTAAACTTTGTCCACTGTGTCCAAC
CTTGAACCGTTCCATTCTTCATCCTAATGAGGCCCCTAGTCCTTCTCCTTCCAAGCTTCAGTTGAGCTATCGTTTGTTTCAAGGATCTCATGTCCCTGACATTGAGCACT
CTCTTCGCCATCCATCTTCTGTCAATCTTCCCCACCTTGAAGATCTAAGAACCCCTAATGGTGGCTTGCTGCTTCCTCCTCCAATTGCAAATCAAATAGTTCATGCCTTA
TCTTCTGAGTCCAGAAGTCTCAGTGGGATCATTCATGATCTTACTGAAAGAAGAAGGCTTATTGATTCAATAGTCTCTTCAATTCGGCTGTTGATTCCTTCTTCTGAGGA
AGCTCCTGAGATCAATTCTACTTCTAAGGATCCTTGA
Protein sequenceShow/hide protein sequence
MSLPLRLRHCLRLHLRRSSQDHTPLARLLKRNHTTQTTPPTNSPPPVNQPAPNSVPSPNSPPPPPQPTPKVKNKRISTKSGRRKVPLHVTPVPIDGLSFHHEAHVHKWKY
VVQRRIADESEVSDDHHSCIAIMTLISQAKLCPLCPTLNRSILHPNEAPSPSPSKLQLSYRLFQGSHVPDIEHSLRHPSSVNLPHLEDLRTPNGGLLLPPPIANQIVHAL
SSESRSLSGIIHDLTERRRLIDSIVSSIRLLIPSSEEAPEINSTSKDP