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PI0010511 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010511
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein LNK1 isoform X1
Genome locationchr11:12007618..12011987
RNA-Seq ExpressionPI0010511
SyntenyPI0010511
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0007623 - circadian rhythm (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039928 - LNK family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143698.1 uncharacterized protein LOC101206051 [Cucumis sativus]2.1e-2683.52Show/hide
Query:  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSAPSSES--SSSSLSALGSSALASLSKLDLVPFETIDFGASSVKPLTRALSQL
        DWFPVALAPSRRLL  FC    GGGD  GSRSSAPLLL APSSES  S+SS SALGSSALASLSKLDLVPFET+DFGASSVKPLTRALSQ+
Subjt:  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSAPSSES--SSSSLSALGSSALASLSKLDLVPFETIDFGASSVKPLTRALSQL

XP_008445882.1 PREDICTED: uncharacterized protein LOC103488768 [Cucumis melo]1.7e-2379.57Show/hide
Query:  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSA-PSSESS---SSSLSALGSSALASLSKLDLVPFETIDFGASSVKPLTRALSQL
        DWFPVALAPSRRLL HFCGGGGGG    G  SSAPLLL+A PSSESS   SSS+SALGSSAL  LSKLDLVPFE+IDF ASSV PLTRALSQ+
Subjt:  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSA-PSSESS---SSSLSALGSSALASLSKLDLVPFETIDFGASSVKPLTRALSQL

XP_038893039.1 uncharacterized protein LOC120081928 [Benincasa hispida]2.5e-2276.4Show/hide
Query:  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSAPSSESSSSSLSALGSSALASLSKLDLVPFETIDFGASSVKPLTRALSQL
        DWFPVALAPSRRLL  FC    GGGDGSGSR+S PLLL  PSS  S+   S LGSSALASLSKLDLVPFET+DFG SS KPLTRALSQ+
Subjt:  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSAPSSESSSSSLSALGSSALASLSKLDLVPFETIDFGASSVKPLTRALSQL

XP_038903968.1 protein LNK1 isoform X1 [Benincasa hispida]8.4e-2355.28Show/hide
Query:  IDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL-----------------------------------IDRSVAHLLFHRPSDPSLM
        I   A+S + L + + QLDIRTKLCIRDSLYRLARSAEQ HNCANL                                   IDRSVAHLLFHRPSDPSLM
Subjt:  IDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL-----------------------------------IDRSVAHLLFHRPSDPSLM

Query:  PAGGNTLSLKSHKLVCSLTFQFQ
        PAGGNTL LKSHKLV +    FQ
Subjt:  PAGGNTLSLKSHKLVCSLTFQFQ

XP_038903970.1 protein LNK1 isoform X3 [Benincasa hispida]8.4e-2355.28Show/hide
Query:  IDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL-----------------------------------IDRSVAHLLFHRPSDPSLM
        I   A+S + L + + QLDIRTKLCIRDSLYRLARSAEQ HNCANL                                   IDRSVAHLLFHRPSDPSLM
Subjt:  IDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL-----------------------------------IDRSVAHLLFHRPSDPSLM

Query:  PAGGNTLSLKSHKLVCSLTFQFQ
        PAGGNTL LKSHKLV +    FQ
Subjt:  PAGGNTLSLKSHKLVCSLTFQFQ

TrEMBL top hitse value%identityAlignment
A0A0A0KRW7 Uncharacterized protein1.0e-2683.52Show/hide
Query:  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSAPSSES--SSSSLSALGSSALASLSKLDLVPFETIDFGASSVKPLTRALSQL
        DWFPVALAPSRRLL  FC    GGGD  GSRSSAPLLL APSSES  S+SS SALGSSALASLSKLDLVPFET+DFGASSVKPLTRALSQ+
Subjt:  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSAPSSES--SSSSLSALGSSALASLSKLDLVPFETIDFGASSVKPLTRALSQL

A0A0A0KVV5 Uncharacterized protein2.0e-2247.13Show/hide
Query:  SSAPLLLSAPSSES------SSSSLSALGSSALASLSKLDLVP-----FETIDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL---
        +S P+   AP SES      S S + + GS      S     P      + I   A+S + L + + QLDIRTKLCIRDSLYRLARSAEQ HNCANL   
Subjt:  SSAPLLLSAPSSES------SSSSLSALGSSALASLSKLDLVP-----FETIDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL---

Query:  --------------------------------IDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLVCSLTFQFQ
                                        IDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLV +    FQ
Subjt:  --------------------------------IDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLVCSLTFQFQ

A0A1S3BEK6 uncharacterized protein LOC1034887688.2e-2479.57Show/hide
Query:  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSA-PSSESS---SSSLSALGSSALASLSKLDLVPFETIDFGASSVKPLTRALSQL
        DWFPVALAPSRRLL HFCGGGGGG    G  SSAPLLL+A PSSESS   SSS+SALGSSAL  LSKLDLVPFE+IDF ASSV PLTRALSQ+
Subjt:  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSA-PSSESS---SSSLSALGSSALASLSKLDLVPFETIDFGASSVKPLTRALSQL

A0A1S3C1I0 protein LNK1 isoform X14.5e-2246.55Show/hide
Query:  SSAPLLLSAPSSES------SSSSLSALGSSALASLSKLDLVP-----FETIDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL---
        +S P+   AP SES      S S + + GS      S     P      + I   A+S + L + + QLDIRTKLCIRDSLYRLARSAEQ HNCAN+   
Subjt:  SSAPLLLSAPSSES------SSSSLSALGSSALASLSKLDLVP-----FETIDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL---

Query:  --------------------------------IDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLVCSLTFQFQ
                                        IDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLV +    FQ
Subjt:  --------------------------------IDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLVCSLTFQFQ

A0A5A7SSX3 BTB/POZ domain protein8.2e-2479.57Show/hide
Query:  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSA-PSSESS---SSSLSALGSSALASLSKLDLVPFETIDFGASSVKPLTRALSQL
        DWFPVALAPSRRLL HFCGGGGGG    G  SSAPLLL+A PSSESS   SSS+SALGSSAL  LSKLDLVPFE+IDF ASSV PLTRALSQ+
Subjt:  DWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSA-PSSESS---SSSLSALGSSALASLSKLDLVPFETIDFGASSVKPLTRALSQL

SwissProt top hitse value%identityAlignment
A8MQN2 Protein LNK15.1e-1541.73Show/hide
Query:  GSSALASLSKLDLVPFETIDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL-----------------------------IDRSVAH
        GSS ++S+        + I   A+S + L + + QLD+RTKLCIRDSLYRLA+SAEQ H+  N                              IDRS+AH
Subjt:  GSSALASLSKLDLVPFETIDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL-----------------------------IDRSVAH

Query:  LLFHRPSDPSLMPAGGNTLSLKSHKLV
        LLFHRPSD SL  +  N LS KSH ++
Subjt:  LLFHRPSDPSLMPAGGNTLSLKSHKLV

Arabidopsis top hitse value%identityAlignment
AT3G54500.1 BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1)1.1e-0434.88Show/hide
Query:  LTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCA-----------------------------------NLIDRSVAHLLFHRPSD
        L   +++LD+ T+ CIRDSL+RLA SA Q H  +                                   N  DR+VAHLLFHRP D
Subjt:  LTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCA-----------------------------------NLIDRSVAHLLFHRPSD

AT3G54500.2 BEST Arabidopsis thaliana protein match is: dentin sialophosphoprotein-related (TAIR:AT5G64170.1)1.1e-0434.88Show/hide
Query:  LTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCA-----------------------------------NLIDRSVAHLLFHRPSD
        L   +++LD+ T+ CIRDSL+RLA SA Q H  +                                   N  DR+VAHLLFHRP D
Subjt:  LTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCA-----------------------------------NLIDRSVAHLLFHRPSD

AT3G54500.3 FUNCTIONS IN: molecular_function unknown1.1e-0434.88Show/hide
Query:  LTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCA-----------------------------------NLIDRSVAHLLFHRPSD
        L   +++LD+ T+ CIRDSL+RLA SA Q H  +                                   N  DR+VAHLLFHRP D
Subjt:  LTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCA-----------------------------------NLIDRSVAHLLFHRPSD

AT5G64170.1 dentin sialophosphoprotein-related3.7e-1641.73Show/hide
Query:  GSSALASLSKLDLVPFETIDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL-----------------------------IDRSVAH
        GSS ++S+        + I   A+S + L + + QLD+RTKLCIRDSLYRLA+SAEQ H+  N                              IDRS+AH
Subjt:  GSSALASLSKLDLVPFETIDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL-----------------------------IDRSVAH

Query:  LLFHRPSDPSLMPAGGNTLSLKSHKLV
        LLFHRPSD SL  +  N LS KSH ++
Subjt:  LLFHRPSDPSLMPAGGNTLSLKSHKLV

AT5G64170.2 dentin sialophosphoprotein-related3.7e-1641.73Show/hide
Query:  GSSALASLSKLDLVPFETIDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL-----------------------------IDRSVAH
        GSS ++S+        + I   A+S + L + + QLD+RTKLCIRDSLYRLA+SAEQ H+  N                              IDRS+AH
Subjt:  GSSALASLSKLDLVPFETIDFGASSVKPLTRALSQLDIRTKLCIRDSLYRLARSAEQGHNCANL-----------------------------IDRSVAH

Query:  LLFHRPSDPSLMPAGGNTLSLKSHKLV
        LLFHRPSD SL  +  N LS KSH ++
Subjt:  LLFHRPSDPSLMPAGGNTLSLKSHKLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAGTCTATCCATCCATCGGTCGGATTGGTTTCCTGTTGCTCTCGCCCCTTCTCGCCGGCTTTTAATTCATTTCTGTGGCGGTGGCGGTGGTGGTGGCGACGGTAG
TGGGTCTAGGAGTTCGGCGCCTTTGCTGTTGTCGGCGCCATCTTCTGAGTCATCGTCGTCGTCTTTGTCTGCGTTGGGCTCTTCGGCTTTGGCTTCTCTTTCTAAATTGG
ATTTGGTTCCTTTTGAAACTATCGATTTTGGTGCTTCCTCTGTTAAGCCTCTCACCCGAGCACTCTCTCAATTGGATATTAGGACAAAACTATGCATAAGAGACAGTCTC
TATCGCCTGGCAAGGAGCGCAGAGCAGGGACATAACTGTGCTAATCTTATAGACCGGTCAGTTGCACACTTGCTGTTTCACCGGCCTTCAGATCCTTCATTAATGCCTGC
TGGTGGTAACACCTTGTCTCTAAAATCTCATAAACTGGTATGCTCTTTAACCTTTCAGTTTCAGTTTCAGTTTCAGTTTTCTTCCTTGGAACAAAATCACCTCCAGTTTG
AGAAAGTCAAGGCTGTTGTCTTAGGGACTCAAAAGTGTCTTATTTATCTGTTCAATGTCATTCGTCTCGCCATGTCTGGGCGAAGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAGTCTATCCATCCATCGGTCGGATTGGTTTCCTGTTGCTCTCGCCCCTTCTCGCCGGCTTTTAATTCATTTCTGTGGCGGTGGCGGTGGTGGTGGCGACGGTAG
TGGGTCTAGGAGTTCGGCGCCTTTGCTGTTGTCGGCGCCATCTTCTGAGTCATCGTCGTCGTCTTTGTCTGCGTTGGGCTCTTCGGCTTTGGCTTCTCTTTCTAAATTGG
ATTTGGTTCCTTTTGAAACTATCGATTTTGGTGCTTCCTCTGTTAAGCCTCTCACCCGAGCACTCTCTCAATTGGATATTAGGACAAAACTATGCATAAGAGACAGTCTC
TATCGCCTGGCAAGGAGCGCAGAGCAGGGACATAACTGTGCTAATCTTATAGACCGGTCAGTTGCACACTTGCTGTTTCACCGGCCTTCAGATCCTTCATTAATGCCTGC
TGGTGGTAACACCTTGTCTCTAAAATCTCATAAACTGGTATGCTCTTTAACCTTTCAGTTTCAGTTTCAGTTTCAGTTTTCTTCCTTGGAACAAAATCACCTCCAGTTTG
AGAAAGTCAAGGCTGTTGTCTTAGGGACTCAAAAGTGTCTTATTTATCTGTTCAATGTCATTCGTCTCGCCATGTCTGGGCGAAGGAAGTGAAAAGCTAAATCTTATTCC
TTTATGAGGCTGCCCTAAGAATTTTAATCACGTATGAAAAAGGTATGTGAGATTCATCAATTCAAGCTATGAAAGAGCAATGTACGGTTGGAGGCAATTTCAATTTAGGA
GCTAATGTGTTTGGGAATGATCATGATGTGTAAGTTCCACGAGAGTTGGATTTGTACTAGAAATTTTTTTGAGTACTAAAATGTAAATATTAGTTTAATAATATACCAGT
TTAGTATGGGTATTTGGTGTAAATTCTAATGATTTTTTTGTTGTCTTAGTATAATGAGAAAATTCTAAATTGTTTGTAGAAATACTTTCATTTTGTATTATATTTTAGGT
TAGAATTTTGTATTTACAGGTGTAAAGAAAATATTGGTAGACTAGCACACAATTACAACAAATAATTTTTTTATATTTTTAATTGCATATGGTGACGGATATTTAATGGC
AAAAA
Protein sequenceShow/hide protein sequence
MPSLSIHRSDWFPVALAPSRRLLIHFCGGGGGGGDGSGSRSSAPLLLSAPSSESSSSSLSALGSSALASLSKLDLVPFETIDFGASSVKPLTRALSQLDIRTKLCIRDSL
YRLARSAEQGHNCANLIDRSVAHLLFHRPSDPSLMPAGGNTLSLKSHKLVCSLTFQFQFQFQFSSLEQNHLQFEKVKAVVLGTQKCLIYLFNVIRLAMSGRRK