; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0010533 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010533
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr02:6387448..6388440
RNA-Seq ExpressionPI0010533
SyntenyPI0010533
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033487.1 uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa]1.3e-8162.77Show/hide
Query:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNL----------------------NGFGWNEEQ
        MASINSK TKH WTTIED+ALVE CLLQLVE+G WR DNGTFK GYLVQVQKLMKEKI  SNIQ TPNL                      +GF WN+E+
Subjt:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNL----------------------NGFGWNEEQ

Query:  KCIEVEKF-------GHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHD
        KCIE EK        GH NAR LLNKPFPYFYDLEIVFGRDRATGG+CKTP EM SQTA+D E+DDM INLE+FDI N H LEPPSG+DM STPTSM HD
Subjt:  KCIEVEKF-------GHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHD

Query:  AGSSRPSKKRRSYLGDLMDKFRAEKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAK
        AGS RPSKKRRSY  DLMD FRA                                ESLL DPTMLHAF DYP +
Subjt:  AGSSRPSKKRRSYLGDLMDKFRAEKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAK

KAA0050106.1 retrotransposon protein [Cucumis melo var. makuwa]3.5e-8762.75Show/hide
Query:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNL----------------------NGFGWNEEQ
        MAS NSKATKHRWTTI D+ LVE CLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKI GSNIQ TPNL                      +GFGWNEE+
Subjt:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNL----------------------NGFGWNEEQ

Query:  KCIEVEKFGHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHDAGSSRPS
        KCIE EK                F D                       +TA+DIE+DDMDINLE+FDI N H LEPPSG+DM STPTSM HDAGSSRPS
Subjt:  KCIEVEKFGHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHDAGSSRPS

Query:  KKRRSYLGDLMDKFRA-----------------EKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAKWKYSKCMCIIGRQP
        KKRRSY GDLMD FRA                 EKMEIESSLHK+LYV+LQTIPGMDVD+CLIV ESLL DPTMLHAF DYPA+WKY KCM I+GRQP
Subjt:  KKRRSYLGDLMDKFRA-----------------EKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAKWKYSKCMCIIGRQP

KAA0063789.1 retrotransposon protein [Cucumis melo var. makuwa]1.8e-8363.3Show/hide
Query:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQV-QKLMKEKIPGSNIQATPNLNGFGWNEEQKCIEVEKF-------GHPNAR
        MAS NSKATKH+WTTIED+ALVE CLLQLVEEGGWRADN TFK GYL  V  K+M+           P  + FGWNEE+KCIE EK        GH NAR
Subjt:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQV-QKLMKEKIPGSNIQATPNLNGFGWNEEQKCIEVEKF-------GHPNAR

Query:  GLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHDAGSSRPSKKRRSYLGDLMDKF
        GLLNK FPYFYDLE+VFGRDRAT GRCKTP +M SQ AKD E+DDMDINLE+FDI N H L+PPSG+DM+STPTSM HDAGSSRPSKKRRSY GDL++ F
Subjt:  GLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHDAGSSRPSKKRRSYLGDLMDKF

Query:  RAEKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAKWKYSKCMCIIGRQP
         A                               +ESLL DPTMLHAF DYPA+WKY KCM I+GRQP
Subjt:  RAEKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAKWKYSKCMCIIGRQP

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]7.2e-10173.03Show/hide
Query:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNLNGFGWNEEQKCIEVEK-------FGHPNARG
        MAS NSKATKHRWTTIED+ LVE CLLQLVEEGGWRADNGTFKLGYL Q   + +           P  +GFGWNE QKCIEVEK        GHPNA+G
Subjt:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNLNGFGWNEEQKCIEVEK-------FGHPNARG

Query:  LLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHDAGSSRPSKKRRSYLGDLMDKFR
        LLNKPFPYFYDLE+VFGRDRATGGRCKTP EM SQTA+D E+DDMDINLE+FDI N H LEPPSG+DM STPTSMTHDAGSSRPSKKRRSY GDLMD FR
Subjt:  LLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHDAGSSRPSKKRRSYLGDLMDKFR

Query:  A-----------------EKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYP
        A                 EKMEIESSLHK+LY ELQTIPGMDVD+CLIV ESLL DPTMLHAF DYP
Subjt:  A-----------------EKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYP

TYK26842.1 uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa]2.6e-8263.14Show/hide
Query:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNL----------------------NGFGWNEEQ
        MASINSK TKH WTTIED+ALVE CLLQLVE+G WR DNGTFK GYLVQVQKLMKEKI  SNIQ TPNL                      +GF WN+E+
Subjt:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNL----------------------NGFGWNEEQ

Query:  KCIEVEKF-------GHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHD
        KCIE EK        GH NAR LLNKPFPYFYDLEIVFGRDRATGG+CKTP EM SQTA+D E+DDM INLE+FDI N H LEPPSG+DM STPTSM HD
Subjt:  KCIEVEKF-------GHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHD

Query:  AGSSRPSKKRRSYLGDLMDKFRAEKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAK
        AGSSRPSKKRRSY  DLMD FRA                                ESLL DPTMLHAF DYP +
Subjt:  AGSSRPSKKRRSYLGDLMDKFRAEKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAK

TrEMBL top hitse value%identityAlignment
A0A5A7SW62 Myb_DNA-bind_3 domain-containing protein6.2e-8262.77Show/hide
Query:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNL----------------------NGFGWNEEQ
        MASINSK TKH WTTIED+ALVE CLLQLVE+G WR DNGTFK GYLVQVQKLMKEKI  SNIQ TPNL                      +GF WN+E+
Subjt:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNL----------------------NGFGWNEEQ

Query:  KCIEVEKF-------GHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHD
        KCIE EK        GH NAR LLNKPFPYFYDLEIVFGRDRATGG+CKTP EM SQTA+D E+DDM INLE+FDI N H LEPPSG+DM STPTSM HD
Subjt:  KCIEVEKF-------GHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHD

Query:  AGSSRPSKKRRSYLGDLMDKFRAEKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAK
        AGS RPSKKRRSY  DLMD FRA                                ESLL DPTMLHAF DYP +
Subjt:  AGSSRPSKKRRSYLGDLMDKFRAEKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAK

A0A5A7U7F7 Retrotransposon protein1.7e-8762.75Show/hide
Query:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNL----------------------NGFGWNEEQ
        MAS NSKATKHRWTTI D+ LVE CLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKI GSNIQ TPNL                      +GFGWNEE+
Subjt:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNL----------------------NGFGWNEEQ

Query:  KCIEVEKFGHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHDAGSSRPS
        KCIE EK                F D                       +TA+DIE+DDMDINLE+FDI N H LEPPSG+DM STPTSM HDAGSSRPS
Subjt:  KCIEVEKFGHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHDAGSSRPS

Query:  KKRRSYLGDLMDKFRA-----------------EKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAKWKYSKCMCIIGRQP
        KKRRSY GDLMD FRA                 EKMEIESSLHK+LYV+LQTIPGMDVD+CLIV ESLL DPTMLHAF DYPA+WKY KCM I+GRQP
Subjt:  KKRRSYLGDLMDKFRA-----------------EKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAKWKYSKCMCIIGRQP

A0A5A7VE44 Retrotransposon protein8.6e-8463.3Show/hide
Query:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQV-QKLMKEKIPGSNIQATPNLNGFGWNEEQKCIEVEKF-------GHPNAR
        MAS NSKATKH+WTTIED+ALVE CLLQLVEEGGWRADN TFK GYL  V  K+M+           P  + FGWNEE+KCIE EK        GH NAR
Subjt:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQV-QKLMKEKIPGSNIQATPNLNGFGWNEEQKCIEVEKF-------GHPNAR

Query:  GLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHDAGSSRPSKKRRSYLGDLMDKF
        GLLNK FPYFYDLE+VFGRDRAT GRCKTP +M SQ AKD E+DDMDINLE+FDI N H L+PPSG+DM+STPTSM HDAGSSRPSKKRRSY GDL++ F
Subjt:  GLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHDAGSSRPSKKRRSYLGDLMDKF

Query:  RAEKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAKWKYSKCMCIIGRQP
         A                               +ESLL DPTMLHAF DYPA+WKY KCM I+GRQP
Subjt:  RAEKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAKWKYSKCMCIIGRQP

A0A5D3C7T4 Uncharacterized protein3.5e-10173.03Show/hide
Query:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNLNGFGWNEEQKCIEVEK-------FGHPNARG
        MAS NSKATKHRWTTIED+ LVE CLLQLVEEGGWRADNGTFKLGYL Q   + +           P  +GFGWNE QKCIEVEK        GHPNA+G
Subjt:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNLNGFGWNEEQKCIEVEK-------FGHPNARG

Query:  LLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHDAGSSRPSKKRRSYLGDLMDKFR
        LLNKPFPYFYDLE+VFGRDRATGGRCKTP EM SQTA+D E+DDMDINLE+FDI N H LEPPSG+DM STPTSMTHDAGSSRPSKKRRSY GDLMD FR
Subjt:  LLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHDAGSSRPSKKRRSYLGDLMDKFR

Query:  A-----------------EKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYP
        A                 EKMEIESSLHK+LY ELQTIPGMDVD+CLIV ESLL DPTMLHAF DYP
Subjt:  A-----------------EKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYP

A0A5D3DTL0 Myb_DNA-bind_3 domain-containing protein1.2e-8263.14Show/hide
Query:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNL----------------------NGFGWNEEQ
        MASINSK TKH WTTIED+ALVE CLLQLVE+G WR DNGTFK GYLVQVQKLMKEKI  SNIQ TPNL                      +GF WN+E+
Subjt:  MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNL----------------------NGFGWNEEQ

Query:  KCIEVEKF-------GHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHD
        KCIE EK        GH NAR LLNKPFPYFYDLEIVFGRDRATGG+CKTP EM SQTA+D E+DDM INLE+FDI N H LEPPSG+DM STPTSM HD
Subjt:  KCIEVEKF-------GHPNARGLLNKPFPYFYDLEIVFGRDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHD

Query:  AGSSRPSKKRRSYLGDLMDKFRAEKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAK
        AGSSRPSKKRRSY  DLMD FRA                                ESLL DPTMLHAF DYP +
Subjt:  AGSSRPSKKRRSYLGDLMDKFRAEKMEIESSLHKQLYVELQTIPGMDVDNCLIVVESLLTDPTMLHAFFDYPAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGATAAATTCAAAAGCCACTAAGCATCGATGGACGACCATTGAGGATGACGCATTAGTTGAGTATTGCTTACTACAACTAGTGGAGGAAGGTGGATGGAGGGC
TGATAATGGGACATTCAAACTGGGATATTTGGTACAAGTACAAAAACTAATGAAAGAAAAAATTCCTGGAAGCAACATACAAGCAACTCCAAATCTAAATGGGTTTGGTT
GGAATGAAGAACAAAAGTGCATTGAGGTAGAGAAATTTGGACACCCCAATGCTAGAGGCCTACTGAACAAACCATTTCCTTACTTCTATGACTTGGAAATTGTGTTCGGT
AGAGATAGGGCTACTGGTGGTAGATGTAAGACACCCGCTGAAATGGACTCACAAACTGCAAAAGATATTGAGAAAGATGACATGGACATTAATCTCGAAAACTTTGATAT
TCTAAATCTACATGAACTCGAGCCACCATCAGGGAAGGACATGTCATCCACTCCAACAAGTATGACACATGATGCAGGATCATCTAGGCCAAGTAAGAAAAGGCGATCAT
ATTTAGGAGACCTCATGGACAAATTTCGCGCAGAAAAAATGGAAATAGAATCATCCCTACACAAACAATTATATGTTGAATTACAGACTATTCCTGGAATGGACGTGGAC
AATTGTTTAATTGTAGTCGAGTCTCTATTAACTGATCCCACGATGTTGCATGCATTCTTTGACTACCCAGCAAAATGGAAGTATAGTAAATGCATGTGTATCATAGGAAG
GCAACCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGATAAATTCAAAAGCCACTAAGCATCGATGGACGACCATTGAGGATGACGCATTAGTTGAGTATTGCTTACTACAACTAGTGGAGGAAGGTGGATGGAGGGC
TGATAATGGGACATTCAAACTGGGATATTTGGTACAAGTACAAAAACTAATGAAAGAAAAAATTCCTGGAAGCAACATACAAGCAACTCCAAATCTAAATGGGTTTGGTT
GGAATGAAGAACAAAAGTGCATTGAGGTAGAGAAATTTGGACACCCCAATGCTAGAGGCCTACTGAACAAACCATTTCCTTACTTCTATGACTTGGAAATTGTGTTCGGT
AGAGATAGGGCTACTGGTGGTAGATGTAAGACACCCGCTGAAATGGACTCACAAACTGCAAAAGATATTGAGAAAGATGACATGGACATTAATCTCGAAAACTTTGATAT
TCTAAATCTACATGAACTCGAGCCACCATCAGGGAAGGACATGTCATCCACTCCAACAAGTATGACACATGATGCAGGATCATCTAGGCCAAGTAAGAAAAGGCGATCAT
ATTTAGGAGACCTCATGGACAAATTTCGCGCAGAAAAAATGGAAATAGAATCATCCCTACACAAACAATTATATGTTGAATTACAGACTATTCCTGGAATGGACGTGGAC
AATTGTTTAATTGTAGTCGAGTCTCTATTAACTGATCCCACGATGTTGCATGCATTCTTTGACTACCCAGCAAAATGGAAGTATAGTAAATGCATGTGTATCATAGGAAG
GCAACCATAA
Protein sequenceShow/hide protein sequence
MASINSKATKHRWTTIEDDALVEYCLLQLVEEGGWRADNGTFKLGYLVQVQKLMKEKIPGSNIQATPNLNGFGWNEEQKCIEVEKFGHPNARGLLNKPFPYFYDLEIVFG
RDRATGGRCKTPAEMDSQTAKDIEKDDMDINLENFDILNLHELEPPSGKDMSSTPTSMTHDAGSSRPSKKRRSYLGDLMDKFRAEKMEIESSLHKQLYVELQTIPGMDVD
NCLIVVESLLTDPTMLHAFFDYPAKWKYSKCMCIIGRQP