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PI0010543 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010543
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr04:21624960..21625199
RNA-Seq ExpressionPI0010543
SyntenyPI0010543
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054822.1 hypothetical protein E6C27_scaffold437G001150 [Cucumis melo var. makuwa]3.5e-1461.4Show/hide
Query:  VNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQ
        +N+++++GCVGC   H  DAC LN ETI +V+NDP+SNTYN GWR+H NF WGG GQ
Subjt:  VNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQ

KAA0058408.1 uncharacterized protein E6C27_scaffold409G001200 [Cucumis melo var. makuwa]1.7e-2161.84Show/hide
Query:  MAISQVNVAESSVHAVNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQQNQG
        M ++QVNV  SSVH V  + +M CVGC G +NTD CP NT+ I + +NDP+SNTYN GWRNH NF WGG+GQ NQG
Subjt:  MAISQVNVAESSVHAVNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQQNQG

KAA0066652.1 uncharacterized protein E6C27_scaffold979G00840 [Cucumis melo var. makuwa]5.5e-2060.53Show/hide
Query:  MAISQVNVAESSVHAVNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQQNQG
        M + +VN A+S VH V Q+ ++GCVGCGGPHNTD CP NTET+A+V+NDP+ NTYN GWRNH NF WG   +  +G
Subjt:  MAISQVNVAESSVHAVNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQQNQG

TYK04238.1 hypothetical protein E5676_scaffold758G00120 [Cucumis melo var. makuwa]3.1e-1569.09Show/hide
Query:  MGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQQNQG
        MGCVG G PHNT+ CPLNTE +A+V+NDP+SNTYN GWR H NF WGG    NQG
Subjt:  MGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQQNQG

TYK11061.1 hypothetical protein E5676_scaffold73G00460 [Cucumis melo var. makuwa]3.5e-1462.5Show/hide
Query:  QVNVAESSVHAVNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWG
        QVN A S VHA+ Q+ ++GCVGC GPHNT+ACP N E  A V+    SNTYN GWRNH NF WG
Subjt:  QVNVAESSVHAVNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWG

TrEMBL top hitse value%identityAlignment
A0A5A7UG80 Uncharacterized protein1.7e-1461.4Show/hide
Query:  VNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQ
        +N+++++GCVGC   H  DAC LN ETI +V+NDP+SNTYN GWR+H NF WGG GQ
Subjt:  VNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQ

A0A5A7UTC1 Uncharacterized protein8.3e-2261.84Show/hide
Query:  MAISQVNVAESSVHAVNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQQNQG
        M ++QVNV  SSVH V  + +M CVGC G +NTD CP NT+ I + +NDP+SNTYN GWRNH NF WGG+GQ NQG
Subjt:  MAISQVNVAESSVHAVNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQQNQG

A0A5A7VE68 Uncharacterized protein2.7e-2060.53Show/hide
Query:  MAISQVNVAESSVHAVNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQQNQG
        M + +VN A+S VH V Q+ ++GCVGCGGPHNTD CP NTET+A+V+NDP+ NTYN GWRNH NF WG   +  +G
Subjt:  MAISQVNVAESSVHAVNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQQNQG

A0A5D3BYZ5 Uncharacterized protein1.5e-1569.09Show/hide
Query:  MGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQQNQG
        MGCVG G PHNT+ CPLNTE +A+V+NDP+SNTYN GWR H NF WGG    NQG
Subjt:  MGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQQNQG

A0A5D3CGY4 Uncharacterized protein1.7e-1462.5Show/hide
Query:  QVNVAESSVHAVNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWG
        QVN A S VHA+ Q+ ++GCVGC GPHNT+ACP N E  A V+    SNTYN GWRNH NF WG
Subjt:  QVNVAESSVHAVNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATATCGCAAGTCAATGTCGCAGAAAGCTCTGTGCACGCGGTAAACCAAATTGATGACATGGGATGTGTGGGATGTGGCGGTCCTCATAATACTGACGCATGCCC
ACTCAACACTGAAACTATCGCGTTCGTAAGGAACGACCCCTTCTCCAATACTTACAACCCTGGTTGGAGGAACCATCATAACTTTAGATGGGGAGGATCGGGTCAACAAA
ATCAAGGGTGGTCAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATATCGCAAGTCAATGTCGCAGAAAGCTCTGTGCACGCGGTAAACCAAATTGATGACATGGGATGTGTGGGATGTGGCGGTCCTCATAATACTGACGCATGCCC
ACTCAACACTGAAACTATCGCGTTCGTAAGGAACGACCCCTTCTCCAATACTTACAACCCTGGTTGGAGGAACCATCATAACTTTAGATGGGGAGGATCGGGTCAACAAA
ATCAAGGGTGGTCAAGGTGA
Protein sequenceShow/hide protein sequence
MAISQVNVAESSVHAVNQIDDMGCVGCGGPHNTDACPLNTETIAFVRNDPFSNTYNPGWRNHHNFRWGGSGQQNQGWSR