; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0010555 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010555
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA polymerase epsilon subunit
Genome locationchr12:206358..207530
RNA-Seq ExpressionPI0010555
SyntenyPI0010555
Gene Ontology termsGO:0006261 - DNA-dependent DNA replication (biological process)
GO:0006536 - glutamate metabolic process (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0051781 - positive regulation of cell division (biological process)
GO:0008622 - epsilon DNA polymerase complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0004351 - glutamate decarboxylase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
GO:0070182 - DNA polymerase binding (molecular function)
InterPro domainsIPR016266 - DNA polymerase epsilon, subunit B


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036041.1 DNA polymerase epsilon subunit 2 [Cucumis melo var. makuwa]2.8e-10990.95Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF
        MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVS FHGFEDDAIELVLD+LHEESLKSPIL+KD VHRVIS LLA++E E+ SPNTI+ST+ LCIID F
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF

Query:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        +I KFRYDPIKKIFH HTG+LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGNFYDV
        TASVEINLSNAISFTGNFYD+
Subjt:  TASVEINLSNAISFTGNFYDV

TYJ98844.1 DNA polymerase epsilon subunit 2 [Cucumis melo var. makuwa]4.8e-10991.36Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF
        MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVS FHGFEDDAIELVLD+LHEESLKSPIL+KD VHRVIS LLA++E E+ SPNTI+ST+ LCIID F
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF

Query:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        +I KFRYDPIKKIFH HTG+LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGNFYD
        TASVEINLSNAISFTGNFYD
Subjt:  TASVEINLSNAISFTGNFYD

XP_011657177.1 DNA polymerase epsilon subunit B [Cucumis sativus]5.7e-10289.45Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF
        MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVS  HGFED+AIE VLDNLHEESLKSPILDKDAVHRVISI++A+D+V +ESPNTI+STS LCII+ F
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF

Query:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        +IPKFRYDPIKKIF LHT NLPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGNF
        TASVEINLS+A   TG F
Subjt:  TASVEINLSNAISFTGNF

XP_016899382.1 PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo]6.1e-10489.45Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF
        MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVS FHGFEDDAIELVLD+LHEESLKSPIL+KD VHRVIS LLA++E E+ SPNTI+ST+ LCIID F
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF

Query:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        +I KFRYDPIKKIFH HTG+LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGNF
        TASVEINLSNA   TG F
Subjt:  TASVEINLSNAISFTGNF

XP_038894268.1 DNA polymerase epsilon subunit B [Benincasa hispida]7.9e-10489.45Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF
        MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVS FHG EDDAI+LVLDNLH+ESLKS ILDKDAVHRV+SI+LA+DEV +ESPNTI+STS LCIID F
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF

Query:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        +I KFRYDPIKKIF+LHTG LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGNF
        TASVEINLSNA   TG F
Subjt:  TASVEINLSNAISFTGNF

TrEMBL top hitse value%identityAlignment
A0A0A0LUV9 Uncharacterized protein5.5e-11191.63Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF
        MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVS  HGFED+AIE VLDNLHEESLKSPILDKDAVHRVISI++A+D+V +ESPNTI+STS LCII+ F
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF

Query:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        +IPKFRYDPIKKIF LHT NLPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGNFYDVEKSELV
        TASVEINLS+AISFTGNFYDVEKSELV
Subjt:  TASVEINLSNAISFTGNFYDVEKSELV

A0A1S4DTQ5 DNA polymerase epsilon subunit2.9e-10489.45Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF
        MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVS FHGFEDDAIELVLD+LHEESLKSPIL+KD VHRVIS LLA++E E+ SPNTI+ST+ LCIID F
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF

Query:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        +I KFRYDPIKKIFH HTG+LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGNF
        TASVEINLSNA   TG F
Subjt:  TASVEINLSNAISFTGNF

A0A5A7T342 Glutamate decarboxylase1.4e-10990.95Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF
        MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVS FHGFEDDAIELVLD+LHEESLKSPIL+KD VHRVIS LLA++E E+ SPNTI+ST+ LCIID F
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF

Query:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        +I KFRYDPIKKIFH HTG+LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGNFYDV
        TASVEINLSNAISFTGNFYD+
Subjt:  TASVEINLSNAISFTGNFYDV

A0A5D3BIF9 Glutamate decarboxylase2.3e-10991.36Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF
        MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVS FHGFEDDAIELVLD+LHEESLKSPIL+KD VHRVIS LLA++E E+ SPNTI+ST+ LCIID F
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF

Query:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        +I KFRYDPIKKIFH HTG+LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGNFYD
        TASVEINLSNAISFTGNFYD
Subjt:  TASVEINLSNAISFTGNFYD

A0A6J1KGF0 DNA polymerase epsilon subunit1.2e-9281.19Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF
        MD  TLR+KVQRK+KIRG YSIKL+AL EIVSF S F G EDDAI+LVLD+LH+ESL+S I+DKDAVHRV+SILLA+DE  +E P+T +STS LCIID F
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTF

Query:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
        +I K+RYDPIKKIF++HTG+LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL
Subjt:  NIPKFRYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDL

Query:  TASVEINLSNAISFTGNF
        TASVEINLS+A   TG F
Subjt:  TASVEINLSNAISFTGNF

SwissProt top hitse value%identityAlignment
A7YWS7 DNA polymerase epsilon subunit 22.9e-1630Show/hide
Query:  LRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFE-DDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTFNIPK
        LR +     K+RGL  ++ EA+  +   + S +  E +DA+E ++D + ++ L S ++++  V   +       E  +    TI       II  F+IP+
Subjt:  LRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFE-DDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTFNIPK

Query:  FRYD-PIKKIFHLHTGNLP---IHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT---GRKWVMGVISQMEDGHFY
        F Y+   KK   L   N P   + G A  KA L+R+R+ +L QR  R + F+ P         GS  ++  I++L+G T   G   V+G+I+Q+++G F+
Subjt:  FRYD-PIKKIFHLHTGNLP---IHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT---GRKWVMGVISQMEDGHFY

Query:  LEDLTASVEINLSNAISFTG
        LED T +++++LS A   +G
Subjt:  LEDLTASVEINLSNAISFTG

P56282 DNA polymerase epsilon subunit 21.6e-1428.64Show/hide
Query:  LRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFE-DDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTFNIPK
        LR +     K+RGL  ++ EA+  +   + S    E +D +E +++ + ++ L S ++++  V   +       E  +    TI       II  F+IP+
Subjt:  LRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFE-DDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTFNIPK

Query:  FRYD-PIKKIFHLHTGNLP---IHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT---GRKWVMGVISQMEDGHFY
        F Y+   KK   L   N P   + G    KA ++R+R+ +L QR  R + F+ P         GS  ++  I++L+G T   G   V+G+I+Q+++G F+
Subjt:  FRYD-PIKKIFHLHTGNLP---IHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT---GRKWVMGVISQMEDGHFY

Query:  LEDLTASVEINLSNAISFTG
        LED T +V+++LS A   +G
Subjt:  LEDLTASVEINLSNAISFTG

Q500V9 DNA polymerase epsilon subunit B1.2e-5758.22Show/hide
Query:  RKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFED-DAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTFNIPKF
        RKK+Q+K K RG Y++K +ALDEI+ F   F   +D +AI+L+LDNL +E+ KS  +D ++V  +I+ LL +    +E P T  S S L IID F +PKF
Subjt:  RKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFED-DAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTFNIPKF

Query:  RYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVE
         YD +KK F+ HT +LPIHG+A AK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q GRKWVMGVISQ+EDGHFYLEDL+ASVE
Subjt:  RYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVE

Query:  INLSNAISFTGNF
        I+LS A   TG F
Subjt:  INLSNAISFTGNF

Q54Y85 DNA polymerase epsilon subunit 26.0e-2233.33Show/hide
Query:  RKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDK-DAVHRVISILLASDEVEKESPNTISSTSGLCIIDTFNIPKF
        +K++ +   + G +SIK +A+  I++ + +  G++   I  ++DNL +   KS  L   +   ++I  + +SD +EKE+         L +ID FN P F
Subjt:  RKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDK-DAVHRVISILLASDEVEKESPNTISSTSGLCIIDTFNIPKF

Query:  RYDPIKKIF-HLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASV
         +D   K F      +  +HG + +K+ LYR R+L + QR  R+ +FS P             I+P+ SL+G TGRK V+G ISQ+E+  FY+EDL  +V
Subjt:  RYDPIKKIF-HLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASV

Query:  EINLSNA
        +I++S A
Subjt:  EINLSNA

Q5ZKQ6 DNA polymerase epsilon subunit 24.2e-1528.07Show/hide
Query:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFE-DDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDT
        M+   LR+++    ++RGL  ++ EA+  +   + S +  E +D I+ ++D + ++ L + +++   V   +       E  +    TI +     II  
Subjt:  MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFE-DDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDT

Query:  FNIPKFRYDPIKKIF-HLHTGNLPI---HGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAF----DIGMSHFGSCEISPIQSLVGQTGR---KWVMGVIS
        F+IP++ Y+P +K F  L   NLP+    G A  KA L+R+R+ +L QR  R + F+  A     D   S F   ++  +++L+G T +     V+G+I+
Subjt:  FNIPKFRYDPIKKIF-HLHTGNLPI---HGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAF----DIGMSHFGSCEISPIQSLVGQTGR---KWVMGVIS

Query:  QMEDGHFYLEDLTASVEINLSNAISFTG
        Q+++G ++LED T  V+++LS A   +G
Subjt:  QMEDGHFYLEDLTASVEINLSNAISFTG

Arabidopsis top hitse value%identityAlignment
AT5G22110.1 DNA polymerase epsilon subunit B28.3e-5958.22Show/hide
Query:  RKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFED-DAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTFNIPKF
        RKK+Q+K K RG Y++K +ALDEI+ F   F   +D +AI+L+LDNL +E+ KS  +D ++V  +I+ LL +    +E P T  S S L IID F +PKF
Subjt:  RKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFED-DAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTFNIPKF

Query:  RYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVE
         YD +KK F+ HT +LPIHG+A AK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q GRKWVMGVISQ+EDGHFYLEDL+ASVE
Subjt:  RYDPIKKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVE

Query:  INLSNAISFTGNF
        I+LS A   TG F
Subjt:  INLSNAISFTGNF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACACATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTGGAAGCTCTTGACGAGATCGTTTCCTTTGTCTCTTCTTT
CCATGGCTTCGAAGATGACGCTATAGAACTTGTTCTCGACAATCTCCATGAAGAATCTTTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGGGTTATCAGCATTT
TGCTTGCATCTGATGAAGTGGAAAAAGAAAGTCCCAATACCATTAGCAGTACATCTGGTCTTTGCATCATCGACACTTTTAATATCCCCAAGTTTCGTTATGATCCCATA
AAAAAGATCTTTCATCTGCACACAGGAAACCTTCCAATTCATGGAGATGCTCCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCCCG
AGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCA
TGGGAGTGATCTCTCAAATGGAGGATGGCCACTTTTACTTGGAGGACCTTACTGCATCTGTGGAAATTAATCTATCTAATGCTATATCCTTTACTGGCAACTTCTATGAT
GTGGAAAAATCTGAACTTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACACATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTGGAAGCTCTTGACGAGATCGTTTCCTTTGTCTCTTCTTT
CCATGGCTTCGAAGATGACGCTATAGAACTTGTTCTCGACAATCTCCATGAAGAATCTTTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGGGTTATCAGCATTT
TGCTTGCATCTGATGAAGTGGAAAAAGAAAGTCCCAATACCATTAGCAGTACATCTGGTCTTTGCATCATCGACACTTTTAATATCCCCAAGTTTCGTTATGATCCCATA
AAAAAGATCTTTCATCTGCACACAGGAAACCTTCCAATTCATGGAGATGCTCCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCCCG
AGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCA
TGGGAGTGATCTCTCAAATGGAGGATGGCCACTTTTACTTGGAGGACCTTACTGCATCTGTGGAAATTAATCTATCTAATGCTATATCCTTTACTGGCAACTTCTATGAT
GTGGAAAAATCTGAACTTGTTTGA
Protein sequenceShow/hide protein sequence
MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSSFHGFEDDAIELVLDNLHEESLKSPILDKDAVHRVISILLASDEVEKESPNTISSTSGLCIIDTFNIPKFRYDPI
KKIFHLHTGNLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSNAISFTGNFYD
VEKSELV