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PI0010577 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010577
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr03:20801018..20801269
RNA-Seq ExpressionPI0010577
SyntenyPI0010577
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062448.1 disease resistance protein [Cucumis melo var. makuwa]4.0e-1351.76Show/hide
Query:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIK---GDEEVIESEISEKEEEEEIPIIQSFL
        M +HWPS T+ F +    VILK DP L+  ECSLKT++K+WEEEDQGF +EFQ I+   G E  +ESE  E+ EE  +P+I++ L
Subjt:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIK---GDEEVIESEISEKEEEEEIPIIQSFL

TYJ98046.1 peroxidase 64 [Cucumis melo var. makuwa]4.0e-1351.76Show/hide
Query:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIK---GDEEVIESEISEKEEEEEIPIIQSFL
        M +HWPS T+ F +    VILK DP L+  ECSLKT++K+WEEEDQGF +EFQ I+   G E  +ESE  E+ EE  +P+I++ L
Subjt:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIK---GDEEVIESEISEKEEEEEIPIIQSFL

TYK02774.1 pleiotropic drug resistance protein 1-like [Cucumis melo var. makuwa]1.6e-1454.22Show/hide
Query:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIKGDE-EVIESEISEKEEEEEIPIIQSFL
        M VHWPS +++F++E++ V+ KRD  L+T ECSLK LT+  +EEDQGFWVEFQN+  +E E IE EIS++ +EE +P+I + L
Subjt:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIKGDE-EVIESEISEKEEEEEIPIIQSFL

TYK27437.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.0e-1351.76Show/hide
Query:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIK---GDEEVIESEISEKEEEEEIPIIQSFL
        M +HWPS T+ F +    VILK DP L+  ECSLKT++K+WEEEDQGF +EFQ I+   G E  +ESE  E+ EE  +P+I++ L
Subjt:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIK---GDEEVIESEISEKEEEEEIPIIQSFL

XP_031744430.1 uncharacterized protein LOC116405043 [Cucumis sativus]9.0e-1353.66Show/hide
Query:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIKGDEEVIESEISEKEEEEEIPIIQSFL
        M +HWPS T+SF +  + +ILK DP L   ECSLKT+ K+WE EDQGF +EFQ  + D EV E E   K +EEEIP+I++ L
Subjt:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIKGDEEVIESEISEKEEEEEIPIIQSFL

TrEMBL top hitse value%identityAlignment
A0A5A7TKV5 Retrotransposon protein7.4e-1354.05Show/hide
Query:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIKGDEEVIESEISEKEEEEE
        MGVHWPS +++F   ++T+ILK DP L+T ECSLKT+TK+WE EDQGF +EFQN K   +  +S I++K  +E+
Subjt:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIKGDEEVIESEISEKEEEEE

A0A5A7V4D8 Disease resistance protein1.9e-1351.76Show/hide
Query:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIK---GDEEVIESEISEKEEEEEIPIIQSFL
        M +HWPS T+ F +    VILK DP L+  ECSLKT++K+WEEEDQGF +EFQ I+   G E  +ESE  E+ EE  +P+I++ L
Subjt:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIK---GDEEVIESEISEKEEEEEIPIIQSFL

A0A5D3BG24 Peroxidase 641.9e-1351.76Show/hide
Query:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIK---GDEEVIESEISEKEEEEEIPIIQSFL
        M +HWPS T+ F +    VILK DP L+  ECSLKT++K+WEEEDQGF +EFQ I+   G E  +ESE  E+ EE  +P+I++ L
Subjt:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIK---GDEEVIESEISEKEEEEEIPIIQSFL

A0A5D3BUC1 Pleiotropic drug resistance protein 1-like7.9e-1554.22Show/hide
Query:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIKGDE-EVIESEISEKEEEEEIPIIQSFL
        M VHWPS +++F++E++ V+ KRD  L+T ECSLK LT+  +EEDQGFWVEFQN+  +E E IE EIS++ +EE +P+I + L
Subjt:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIKGDE-EVIESEISEKEEEEEIPIIQSFL

A0A5D3DUJ0 Ty3/gypsy retrotransposon protein1.9e-1351.76Show/hide
Query:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIK---GDEEVIESEISEKEEEEEIPIIQSFL
        M +HWPS T+ F +    VILK DP L+  ECSLKT++K+WEEEDQGF +EFQ I+   G E  +ESE  E+ EE  +P+I++ L
Subjt:  MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIK---GDEEVIESEISEKEEEEEIPIIQSFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTGCACTGGCCCTCAGGAACGTTGAGCTTTCAGATAGAAGATAAAACTGTCATTCTCAAGAGGGACCCAAAACTATCGACCGTGGAATGCTCCCTTAAAACATT
AACGAAATCTTGGGAGGAAGAGGACCAAGGTTTTTGGGTGGAATTCCAGAACATAAAGGGGGATGAGGAAGTGATTGAAAGTGAGATCAGTGAAAAGGAGGAAGAAGAGG
AGATTCCTATAATCCAATCCTTCCTCCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTGCACTGGCCCTCAGGAACGTTGAGCTTTCAGATAGAAGATAAAACTGTCATTCTCAAGAGGGACCCAAAACTATCGACCGTGGAATGCTCCCTTAAAACATT
AACGAAATCTTGGGAGGAAGAGGACCAAGGTTTTTGGGTGGAATTCCAGAACATAAAGGGGGATGAGGAAGTGATTGAAAGTGAGATCAGTGAAAAGGAGGAAGAAGAGG
AGATTCCTATAATCCAATCCTTCCTCCACTAG
Protein sequenceShow/hide protein sequence
MGVHWPSGTLSFQIEDKTVILKRDPKLSTVECSLKTLTKSWEEEDQGFWVEFQNIKGDEEVIESEISEKEEEEEIPIIQSFLH