; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0010579 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010579
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr12:7875748..7878534
RNA-Seq ExpressionPI0010579
SyntenyPI0010579
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045532.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]9.3e-9253.97Show/hide
Query:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN
        MDY S LL HL    +I GV F+N C ++H+LFADD+LIF+EDN   L NL +AL  FE ASGL+FN SKST+ PIN+S  ++ +IAS +G     LP N
Subjt:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN

Query:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD
        YLGVPLGGNP S++FW+     +HKKLN WKY+ +SKGG+LTLLKASLSSLPTYQLS FKAP S    IE+HW DFLW    + +  HL+NW+  T PK+
Subjt:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD

Query:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMIL
         GG+GISK++D N A +CKW+W Y NE   LW+K I AKY   + G IP  G+ +S  +PW +I K  DW+ES + W  N+G +LSFWHS W     + L
Subjt:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMIL

Query:  NL
         +
Subjt:  NL

KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.3e-9354.85Show/hide
Query:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN
        MDY S LL HL    +I GV FS++C ++HILFADDIL+F+EDN+  L NL +AL  FE ASGL  N  KS L P+NVS+ ++   AS WGIS  SLP +
Subjt:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN

Query:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD
        YLGVPLGGNP S+ FW  VE K+ KKLN+WKY  +SKGG+LTL+K++LSSLPTYQLSVF+AP+ TC  IE+ W +FLW    + +  HL+NW  VT  K 
Subjt:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD

Query:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMI
        +GGLGIS+V   N A + KW+W Y +EP+ LWR++I  KYKG Y G IP+    ++ KAPW SI+  +DWF SN  W++NNG+ +SFW+SNWS   +++
Subjt:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMI

KAA0056839.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.5e-9256.16Show/hide
Query:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN
        MDY S LL HL    +I GV F+N C ++H+LFADD+LIF+EDN   L NL +AL  FE ASGL+FN SKST+ PIN+S  ++ +IAS +G     LP N
Subjt:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN

Query:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD
        YLGVPLGGNP S++FW      +HKKLN WKY+ +SKGG+LTLLKASLSSLPTYQLS FKAP S    IE+HW DFLW    + +  HL+NW+  T PK+
Subjt:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD

Query:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNW
         GGLGISKV+D N A +CKW+W Y NE   LW+K I AKY   + G IP  G+ +S  +PW +I K  DW+ES + W  N+G +LSFWHS W
Subjt:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNW

KAA0057507.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.5e-9254.3Show/hide
Query:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN
        MDY S LL HL    +I GV F+N C ++H+LFADD+LIF+EDN   L NL +AL  FE ASGL+FN SKST+ PIN+S  ++ +IAS +G     LP N
Subjt:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN

Query:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD
        YLGVPLGGNP S++FW+     +HKKLN WKY+ +SKGG+LTLLKASLSSLPTYQLS FKAP S    IE+HW DFLW    + +  HL+NW+  T PK+
Subjt:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD

Query:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMIL
         GGLGISK++D N A +CKW+W Y NE   LW+K I AKY   + G IP  G+ +S  +PW +I K  DW+ES + W  N+G +LSFWHS W     + L
Subjt:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMIL

Query:  NL
         +
Subjt:  NL

TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]7.1e-9254.3Show/hide
Query:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN
        MDY S LL HL    +I GV F+N C ++H+LFADD+LIF+EDN   L NL +AL  FE ASGL+FN SKST+ PIN+S  ++ +IAS +G     LP N
Subjt:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN

Query:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD
        YLGVPLGGNP S++FW+     +HKKLN WKY+ +SKGG+LTLLKASLSSLPTYQLS FKAP S    IE+HW DFLW    + +  HL+NW+  T PK+
Subjt:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD

Query:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMIL
         GGLGISK++D N A +CKW+W Y NE   LW+K I AKY   + G IP  G+ +S  +PW +I K  DW+ES + W  N+G +LSFWHS W     + L
Subjt:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMIL

Query:  NL
         +
Subjt:  NL

TrEMBL top hitse value%identityAlignment
A0A5A7TQA8 LINE-1 retrotransposable element ORF2 protein4.5e-9253.97Show/hide
Query:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN
        MDY S LL HL    +I GV F+N C ++H+LFADD+LIF+EDN   L NL +AL  FE ASGL+FN SKST+ PIN+S  ++ +IAS +G     LP N
Subjt:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN

Query:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD
        YLGVPLGGNP S++FW+     +HKKLN WKY+ +SKGG+LTLLKASLSSLPTYQLS FKAP S    IE+HW DFLW    + +  HL+NW+  T PK+
Subjt:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD

Query:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMIL
         GG+GISK++D N A +CKW+W Y NE   LW+K I AKY   + G IP  G+ +S  +PW +I K  DW+ES + W  N+G +LSFWHS W     + L
Subjt:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMIL

Query:  NL
         +
Subjt:  NL

A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein6.3e-9454.85Show/hide
Query:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN
        MDY S LL HL    +I GV FS++C ++HILFADDIL+F+EDN+  L NL +AL  FE ASGL  N  KS L P+NVS+ ++   AS WGIS  SLP +
Subjt:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN

Query:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD
        YLGVPLGGNP S+ FW  VE K+ KKLN+WKY  +SKGG+LTL+K++LSSLPTYQLSVF+AP+ TC  IE+ W +FLW    + +  HL+NW  VT  K 
Subjt:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD

Query:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMI
        +GGLGIS+V   N A + KW+W Y +EP+ LWR++I  KYKG Y G IP+    ++ KAPW SI+  +DWF SN  W++NNG+ +SFW+SNWS   +++
Subjt:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMI

A0A5A7US62 LINE-1 retrotransposable element ORF2 protein2.6e-9254.3Show/hide
Query:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN
        MDY S LL HL    +I GV F+N C ++H+LFADD+LIF+EDN   L NL +AL  FE ASGL+FN SKST+ PIN+S  ++ +IAS +G     LP N
Subjt:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN

Query:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD
        YLGVPLGGNP S++FW+     +HKKLN WKY+ +SKGG+LTLLKASLSSLPTYQLS FKAP S    IE+HW DFLW    + +  HL+NW+  T PK+
Subjt:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD

Query:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMIL
         GGLGISK++D N A +CKW+W Y NE   LW+K I AKY   + G IP  G+ +S  +PW +I K  DW+ES + W  N+G +LSFWHS W     + L
Subjt:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMIL

Query:  NL
         +
Subjt:  NL

A0A5A7UTI6 LINE-1 retrotransposable element ORF2 protein2.6e-9256.16Show/hide
Query:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN
        MDY S LL HL    +I GV F+N C ++H+LFADD+LIF+EDN   L NL +AL  FE ASGL+FN SKST+ PIN+S  ++ +IAS +G     LP N
Subjt:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN

Query:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD
        YLGVPLGGNP S++FW      +HKKLN WKY+ +SKGG+LTLLKASLSSLPTYQLS FKAP S    IE+HW DFLW    + +  HL+NW+  T PK+
Subjt:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD

Query:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNW
         GGLGISKV+D N A +CKW+W Y NE   LW+K I AKY   + G IP  G+ +S  +PW +I K  DW+ES + W  N+G +LSFWHS W
Subjt:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNW

A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein3.4e-9254.3Show/hide
Query:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN
        MDY S LL HL    +I GV F+N C ++H+LFADD+LIF+EDN   L NL +AL  FE ASGL+FN SKST+ PIN+S  ++ +IAS +G     LP N
Subjt:  MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTN

Query:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD
        YLGVPLGGNP S++FW+     +HKKLN WKY+ +SKGG+LTLLKASLSSLPTYQLS FKAP S    IE+HW DFLW    + +  HL+NW+  T PK+
Subjt:  YLGVPLGGNPISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKD

Query:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMIL
         GGLGISK++D N A +CKW+W Y NE   LW+K I AKY   + G IP  G+ +S  +PW +I K  DW+ES + W  N+G +LSFWHS W     + L
Subjt:  KGGLGISKVRDINFAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMIL

Query:  NL
         +
Subjt:  NL

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein2.7e-0924.76Show/hide
Query:  LFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTNYLGVPLGGN--PISKTFWEGVERKVHKKLNS
        LFADD+++++E+     +NL   + +F   SG   N  KS  F  N +++   +I  E   +  S    YLG+ L  +   + K  ++ + +++ +  N 
Subjt:  LFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTNYLGVPLGGN--PISKTFWEGVERKVHKKLNS

Query:  WKYTHLSKGGKLTLLKASLSSLPTYQLSV--FKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKDK-GGLGISKVRDINFAFVCK--WMWCY
        WK    S  G++ ++K ++     Y+ +    K P +    +E+    F+W    N KR  +    ++   K+K GG+ +   +    A V K  W W Y
Subjt:  WKYTHLSKGGKLTLLKASLSSLPTYQLSV--FKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKDK-GGLGISKVRDINFAFVCK--WMWCY

Query:  QNEPQLLWRK
        QN     W +
Subjt:  QNEPQLLWRK

P08548 LINE-1 reverse transcriptase homolog2.3e-0823.22Show/hide
Query:  LFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTNYLGVPLGGN--PISKTFWEGVERKVHKKLNS
        LFADD+++++E+  D    L   ++ +   SG   N  KS  F    + +    +      +       YLGV L  +   + K  +E + +++ + +N 
Subjt:  LFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTNYLGVPLGGN--PISKTFWEGVERKVHKKLNS

Query:  WKYTHLSKGGKLTLLKASLSSLPTYQLSV--FKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKDK-GGLGISKVRDINFAFVCK--WMWCY
        WK    S  G++ ++K S+     Y  +    KAP S    +E+    F+W+ K       L++       K+K GG+ +  +R    + V K  W W +
Subjt:  WKYTHLSKGGKLTLLKASLSSLPTYQLSV--FKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKDK-GGLGISKVRDINFAFVCK--WMWCY

Query:  QNEPQLLWRKV
        +N    +W ++
Subjt:  QNEPQLLWRKV

P0C2F6 Putative ribonuclease H protein At1g657507.3e-2334.52Show/hide
Query:  TFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKDKGGLGISKVRDIN
        TF E +ER V  +++ W+   LS  G+LTL KA LSS+P + +S    P S  + +++    FLW   A  K+ HLV W  V  PK +GGLG+   + +N
Subjt:  TFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKDKGGLGISKVRDIN

Query:  FAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIP------TKGKYNSKKAPWLSIVKGL-DWFESNLGWNINNGENLSFWHSNWSTYAKMILNLN
         A + K  W    E   LW  V+  KY   ++G I        KG ++S    W SI  GL D     +GW   +G+ + FW   W +  K +L L+
Subjt:  FAFVCKWMWCYQNEPQLLWRKVIAAKYKGFYLGSIP------TKGKYNSKKAPWLSIVKGL-DWFESNLGWNINNGENLSFWHSNWSTYAKMILNLN

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACTATTTTAGCAGTCTCCTCGATCATTTGATGCACAATAATTCCATTGGAGGAGTTAGGTTCAGCAATTCTTGTTATCTCAACCACATTCTCTTTGCTGATGATAT
TTTGATATTTATGGAAGACAACAATGATCAATTAAAAAACTTGTTCCTTGCCTTAAGATCTTTTGAGCTTGCCTCTGGTCTTAGTTTTAACAGATCAAAGTCTACCCTCT
TCCCAATAAATGTCTCTAAAGAAAAATCTTTAAGAATTGCTTCTGAATGGGGTATCTCCCACGGCTCTCTCCCAACAAACTACCTTGGTGTCCCGTTGGGCGGAAATCCA
ATCTCAAAGACTTTCTGGGAAGGGGTTGAAAGAAAAGTTCATAAAAAGCTGAACAGTTGGAAGTACACTCACCTATCCAAAGGTGGAAAGCTAACATTATTGAAAGCTTC
TCTGTCTAGCCTTCCTACATACCAGCTCTCTGTATTCAAAGCTCCAGCCTCTACTTGTGATACTATTGAAAGACATTGGAGTGATTTCCTCTGGCACGACAAAGCAAATG
GAAAAAGAATGCACCTGGTCAACTGGGATGCTGTCACCATTCCAAAGGATAAGGGAGGTTTGGGAATCAGTAAAGTTAGGGATATAAACTTTGCTTTTGTGTGCAAGTGG
ATGTGGTGTTATCAAAATGAACCTCAGCTGCTTTGGAGAAAAGTTATTGCTGCTAAATACAAAGGCTTTTATCTTGGCTCCATTCCTACAAAAGGGAAATATAACAGTAA
AAAAGCGCCCTGGTTGTCTATTGTCAAAGGCCTTGACTGGTTTGAAAGTAATCTGGGCTGGAATATTAACAATGGCGAGAACCTTTCTTTCTGGCACAGTAATTGGAGTA
CTTATGCTAAAATGATATTAAATCTAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACTATTTTAGCAGTCTCCTCGATCATTTGATGCACAATAATTCCATTGGAGGAGTTAGGTTCAGCAATTCTTGTTATCTCAACCACATTCTCTTTGCTGATGATAT
TTTGATATTTATGGAAGACAACAATGATCAATTAAAAAACTTGTTCCTTGCCTTAAGATCTTTTGAGCTTGCCTCTGGTCTTAGTTTTAACAGATCAAAGTCTACCCTCT
TCCCAATAAATGTCTCTAAAGAAAAATCTTTAAGAATTGCTTCTGAATGGGGTATCTCCCACGGCTCTCTCCCAACAAACTACCTTGGTGTCCCGTTGGGCGGAAATCCA
ATCTCAAAGACTTTCTGGGAAGGGGTTGAAAGAAAAGTTCATAAAAAGCTGAACAGTTGGAAGTACACTCACCTATCCAAAGGTGGAAAGCTAACATTATTGAAAGCTTC
TCTGTCTAGCCTTCCTACATACCAGCTCTCTGTATTCAAAGCTCCAGCCTCTACTTGTGATACTATTGAAAGACATTGGAGTGATTTCCTCTGGCACGACAAAGCAAATG
GAAAAAGAATGCACCTGGTCAACTGGGATGCTGTCACCATTCCAAAGGATAAGGGAGGTTTGGGAATCAGTAAAGTTAGGGATATAAACTTTGCTTTTGTGTGCAAGTGG
ATGTGGTGTTATCAAAATGAACCTCAGCTGCTTTGGAGAAAAGTTATTGCTGCTAAATACAAAGGCTTTTATCTTGGCTCCATTCCTACAAAAGGGAAATATAACAGTAA
AAAAGCGCCCTGGTTGTCTATTGTCAAAGGCCTTGACTGGTTTGAAAGTAATCTGGGCTGGAATATTAACAATGGCGAGAACCTTTCTTTCTGGCACAGTAATTGGAGTA
CTTATGCTAAAATGATATTAAATCTAAATTAA
Protein sequenceShow/hide protein sequence
MDYFSSLLDHLMHNNSIGGVRFSNSCYLNHILFADDILIFMEDNNDQLKNLFLALRSFELASGLSFNRSKSTLFPINVSKEKSLRIASEWGISHGSLPTNYLGVPLGGNP
ISKTFWEGVERKVHKKLNSWKYTHLSKGGKLTLLKASLSSLPTYQLSVFKAPASTCDTIERHWSDFLWHDKANGKRMHLVNWDAVTIPKDKGGLGISKVRDINFAFVCKW
MWCYQNEPQLLWRKVIAAKYKGFYLGSIPTKGKYNSKKAPWLSIVKGLDWFESNLGWNINNGENLSFWHSNWSTYAKMILNLN