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PI0010594 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010594
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDNA-binding protein S1FA
Genome locationchr08:16597240..16598661
RNA-Seq ExpressionPI0010594
SyntenyPI0010594
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006779 - DNA binding protein S1FA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143239.1 DNA-binding protein S1FA [Cucumis sativus]7.8e-3996.63Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGNVIRDGEAR FNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

XP_008449267.1 PREDICTED: DNA-binding protein S1FA-like [Cucumis melo]6.6e-3895.51Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRM NVIRDGEAR FNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

XP_022962636.1 DNA-binding protein S1FA-like [Cucurbita moschata]1.2e-3692.13Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGNVIR+ +AR FNPGLIVLLVVGGLLLAFL GNYALY+YAQKTLPPK+KKPVSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

XP_022972581.1 DNA-binding protein S1FA-like [Cucurbita maxima]1.4e-3591.01Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGNVIRD +AR FNPGLIVLLVVGGLLLAFL GNYALY+YAQ TLP K+KKPVSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

XP_038881351.1 DNA-binding protein S1FA-like [Benincasa hispida]6.6e-3895.51Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGNVIRD +AR FNPGLIVLLVVGGLLLAFL GNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

TrEMBL top hitse value%identityAlignment
A0A0A0KEM3 DNA-binding protein S1FA3.8e-3996.63Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGNVIRDGEAR FNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

A0A1S3BLN5 DNA-binding protein S1FA-like3.2e-3895.51Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRM NVIRDGEAR FNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

A0A5A7TZ88 DNA-binding protein S1FA-like3.2e-3895.51Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRM NVIRDGEAR FNPGLIVLLVVGGLL AFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQG+SAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

A0A6J1HDT2 DNA-binding protein S1FA-like6.0e-3792.13Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGNVIR+ +AR FNPGLIVLLVVGGLLLAFL GNYALY+YAQKTLPPK+KKPVSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

A0A6J1I6D0 DNA-binding protein S1FA-like6.7e-3691.01Show/hide
Query:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        MEDDFDFGDKVPPAVNRMGNVIRD +AR FNPGLIVLLVVGGLLLAFL GNYALY+YAQ TLP K+KKPVSKKKMKRERLKQGISAPGE
Subjt:  MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

SwissProt top hitse value%identityAlignment
P42552 DNA-binding protein S1FA1.2e-2175Show/hide
Query:  IRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        + + EA+  NPGLIVLLV+GGLLL FLVGN+ LY YAQK LPPKKKKP+SKKKMKRERLKQG++ PGE
Subjt:  IRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

P42553 DNA-binding protein S1FA12.2e-2068.92Show/hide
Query:  NRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        ++  N+I +   +  NPG IVLLVV  LL+ F VGNYALYMYAQKTLPP+KKKPVSKKK+KRE+LKQG+SAPGE
Subjt:  NRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

Q42337 DNA-binding protein S1FA28.4e-2071.88Show/hide
Query:  EARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        EA+  NPGLIVLLV+GGLL+ FL+ NY +YMYAQK LPP+KKKP+SKKK+KRE+LKQG+  PGE
Subjt:  EARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

Q7XLX6 DNA-binding protein S1FA22.9e-2071.43Show/hide
Query:  NVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        NV+ +   +  NPG+IVL+VV   LL F VGNYALY+YAQKTLPP+KKKPVSKKKMKRE+LKQG+SAPGE
Subjt:  NVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

Q93VI0 DNA-binding protein S1FA38.4e-2073.44Show/hide
Query:  EARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        E++  NPGLIVLLV+GGLLL FLVGN+ LY YAQK LPP+KKKPVSKKKMK+E++KQG+  PGE
Subjt:  EARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

Arabidopsis top hitse value%identityAlignment
AT2G37120.1 S1FA-like DNA-binding protein6.0e-2171.88Show/hide
Query:  EARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        EA+  NPGLIVLLV+GGLL+ FL+ NY +YMYAQK LPP+KKKP+SKKK+KRE+LKQG+  PGE
Subjt:  EARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

AT3G09735.1 S1FA-like DNA-binding protein6.0e-2173.44Show/hide
Query:  EARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        E++  NPGLIVLLV+GGLLL FLVGN+ LY YAQK LPP+KKKPVSKKKMK+E++KQG+  PGE
Subjt:  EARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

AT3G53370.1 S1FA-like DNA-binding protein1.0e-2075Show/hide
Query:  EARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        EA+  NPGLIVLLVVGG LL FL+ NY LY+YAQK LPP+KKKPVSKKK+KRE+LKQG+  PGE
Subjt:  EARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE

AT3G53370.2 S1FA-like DNA-binding protein3.8e-0772.73Show/hide
Query:  YAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE
        +A K LPP+KKKPVSKKK+KRE+LKQG+  PGE
Subjt:  YAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGACGATTTCGACTTCGGCGATAAGGTCCCCCCGGCCGTCAACCGCATGGGGAATGTGATTAGAGATGGAGAAGCAAGAAGATTCAACCCAGGACTGATTGTGCT
GCTTGTAGTTGGTGGGTTGCTATTGGCATTTCTTGTTGGGAATTATGCTCTCTACATGTATGCGCAGAAGACACTCCCACCAAAAAAGAAGAAACCAGTTTCCAAAAAGA
AGATGAAGAGGGAGAGATTGAAGCAAGGTATCTCTGCACCTGGAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGACGATTTCGACTTCGGCGATAAGGTCCCCCCGGCCGTCAACCGCATGGGGAATGTGATTAGAGATGGAGAAGCAAGAAGATTCAACCCAGGACTGATTGTGCT
GCTTGTAGTTGGTGGGTTGCTATTGGCATTTCTTGTTGGGAATTATGCTCTCTACATGTATGCGCAGAAGACACTCCCACCAAAAAAGAAGAAACCAGTTTCCAAAAAGA
AGATGAAGAGGGAGAGATTGAAGCAAGGTATCTCTGCACCTGGAGAGTAG
Protein sequenceShow/hide protein sequence
MEDDFDFGDKVPPAVNRMGNVIRDGEARRFNPGLIVLLVVGGLLLAFLVGNYALYMYAQKTLPPKKKKPVSKKKMKRERLKQGISAPGE