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PI0010603 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010603
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr03:13605299..13606043
RNA-Seq ExpressionPI0010603
SyntenyPI0010603
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050311.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.3e-5259.36Show/hide
Query:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP
        DW DR+A+LVM W N RRF A GP I QFD+DR NN RL++V DDPQQVL+IC +NE+Y+ENIHYMY+VPI+PA  QRRR  VQEP++LEEV+QHVEEVP
Subjt:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP

Query:  HVRQTQ------------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYE
         V QTQ                              DFG  YYNLEAGPSS++F Q  +DLE+DPSSSY+HGH  GRGEHN YLYY+
Subjt:  HVRQTQ------------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYE

KAA0051098.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.5e-5461.5Show/hide
Query:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP
        DWSDR+A+LVM WLN RRF   GP I QFD+DR NN RLRD  +DPQQVL+IC +NE+Y++NI+YMY+VPI+PAP QRRRA VQE +ELEEV+QH+EEVP
Subjt:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP

Query:  HVRQTQ----------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYEAP
         V QT+                            DFGT YYNL  GPSSSNFGQ  YDL T+PSSSY+HGHG GRGEHN YLYY AP
Subjt:  HVRQTQ----------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYEAP

KAA0051233.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.5e-5460.32Show/hide
Query:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP
        DWSD++A+LVM W N RRF A GP I QFD+DRSNN RLR+V DDPQQVL+IC +NE+YMENIHYMY+VPI+PAP QRRR  VQEP++LEEV+QH EEVP
Subjt:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP

Query:  HVRQTQ------------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYEAP
         + QTQ                              DFG  YYN EAG SS++FGQ  YDL +DPSSSY+H HG GRGEHN YLYYE P
Subjt:  HVRQTQ------------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYEAP

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.5e-5154.21Show/hide
Query:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVD---------------------------RSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIP
        DWSDR+A+LVM W N RRF A GP I QFD+D                           RSNN RLR+V DDPQQVL+IC +NE+YMENIHYMY+VPI+P
Subjt:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVD---------------------------RSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIP

Query:  APAQRRRARVQEPNELEEVEQHVEEVPHVRQTQ----------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGC
        AP QRRR  VQEP++LEEV+QH EEVP + QTQ                            DFG  YYN EAG SS++FGQ  YDL +DPSSSY+HGHG 
Subjt:  APAQRRRARVQEPNELEEVEQHVEEVPHVRQTQ----------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGC

Query:  GRGEHNGYLYYEAP
        GRGEHN YLYYE P
Subjt:  GRGEHNGYLYYEAP

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.2e-5560.85Show/hide
Query:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP
        DWSD++A+LVM W N RRF A GP I QFD+DRSNN RLR+V DDPQQVL+IC +NE+YMENIHYMY+VPI+PAP QRRR  VQEP++LEEV+QH EEVP
Subjt:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP

Query:  HVRQTQ------------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYEAP
         + QTQ                              DFG  YYN EAG SS++FGQ  YDL +DPSSSY+HGHG GRGEHN YLYYE P
Subjt:  HVRQTQ------------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYEAP

TrEMBL top hitse value%identityAlignment
A0A5A7U5S8 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.1e-5560.32Show/hide
Query:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP
        DWSD++A+LVM W N RRF A GP I QFD+DRSNN RLR+V DDPQQVL+IC +NE+YMENIHYMY+VPI+PAP QRRR  VQEP++LEEV+QH EEVP
Subjt:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP

Query:  HVRQTQ------------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYEAP
         + QTQ                              DFG  YYN EAG SS++FGQ  YDL +DPSSSY+H HG GRGEHN YLYYE P
Subjt:  HVRQTQ------------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYEAP

A0A5A7U731 Serine/threonine-protein phosphatase 7 long form-like protein2.7e-5461.5Show/hide
Query:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP
        DWSDR+A+LVM WLN RRF   GP I QFD+DR NN RLRD  +DPQQVL+IC +NE+Y++NI+YMY+VPI+PAP QRRRA VQE +ELEEV+QH+EEVP
Subjt:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP

Query:  HVRQTQ----------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYEAP
         V QT+                            DFGT YYNL  GPSSSNFGQ  YDL T+PSSSY+HGHG GRGEHN YLYY AP
Subjt:  HVRQTQ----------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYEAP

A0A5A7U9V2 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-5259.36Show/hide
Query:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP
        DW DR+A+LVM W N RRF A GP I QFD+DR NN RL++V DDPQQVL+IC +NE+Y+ENIHYMY+VPI+PA  QRRR  VQEP++LEEV+QHVEEVP
Subjt:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP

Query:  HVRQTQ------------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYE
         V QTQ                              DFG  YYNLEAGPSS++F Q  +DLE+DPSSSY+HGH  GRGEHN YLYY+
Subjt:  HVRQTQ------------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYE

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X17.3e-5254.21Show/hide
Query:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVD---------------------------RSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIP
        DWSDR+A+LVM W N RRF A GP I QFD+D                           RSNN RLR+V DDPQQVL+IC +NE+YMENIHYMY+VPI+P
Subjt:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVD---------------------------RSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIP

Query:  APAQRRRARVQEPNELEEVEQHVEEVPHVRQTQ----------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGC
        AP QRRR  VQEP++LEEV+QH EEVP + QTQ                            DFG  YYN EAG SS++FGQ  YDL +DPSSSY+HGHG 
Subjt:  APAQRRRARVQEPNELEEVEQHVEEVPHVRQTQ----------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGC

Query:  GRGEHNGYLYYEAP
        GRGEHN YLYYE P
Subjt:  GRGEHNGYLYYEAP

A0A5D3D5R5 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.1e-5560.85Show/hide
Query:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP
        DWSD++A+LVM W N RRF A GP I QFD+DRSNN RLR+V DDPQQVL+IC +NE+YMENIHYMY+VPI+PAP QRRR  VQEP++LEEV+QH EEVP
Subjt:  DWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVP

Query:  HVRQTQ------------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYEAP
         + QTQ                              DFG  YYN EAG SS++FGQ  YDL +DPSSSY+HGHG GRGEHN YLYYE P
Subjt:  HVRQTQ------------------------------DFGTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYEAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGATTGGTCCGATAGAATTGCCTATTTGGTGATGCTATGGCTAAATTGCAGAAGATTTATTGCTATGGGACCTCTGATTAGACAATTTGATGTAGATAGATCGAA
CAATAGTAGACTTCGGGATGTTGTAGATGATCCACAACAGGTCTTAGATATATGCAAAAATAACGAGCGGTACATGGAGAACATACACTATATGTACAATGTACCTATTA
TACCTGCACCAGCTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTAATGAATTGGAAGAAGTTGAACAACACGTGGAAGAAGTACCTCATGTGAGACAAACACAAGACTTT
GGAACAAGATATTATAATTTAGAGGCAGGTCCATCATCGTCAAACTTTGGACAAGGATGCTACGATTTAGAGACCGATCCATCATCTTCATACATACATGGACATGGATG
TGGTCGTGGAGAACATAACGGATATTTGTACTACGAAGCGCCTACAATTCGAGCAGCAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGATTGGTCCGATAGAATTGCCTATTTGGTGATGCTATGGCTAAATTGCAGAAGATTTATTGCTATGGGACCTCTGATTAGACAATTTGATGTAGATAGATCGAA
CAATAGTAGACTTCGGGATGTTGTAGATGATCCACAACAGGTCTTAGATATATGCAAAAATAACGAGCGGTACATGGAGAACATACACTATATGTACAATGTACCTATTA
TACCTGCACCAGCTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTAATGAATTGGAAGAAGTTGAACAACACGTGGAAGAAGTACCTCATGTGAGACAAACACAAGACTTT
GGAACAAGATATTATAATTTAGAGGCAGGTCCATCATCGTCAAACTTTGGACAAGGATGCTACGATTTAGAGACCGATCCATCATCTTCATACATACATGGACATGGATG
TGGTCGTGGAGAACATAACGGATATTTGTACTACGAAGCGCCTACAATTCGAGCAGCAAGATGA
Protein sequenceShow/hide protein sequence
MTDWSDRIAYLVMLWLNCRRFIAMGPLIRQFDVDRSNNSRLRDVVDDPQQVLDICKNNERYMENIHYMYNVPIIPAPAQRRRARVQEPNELEEVEQHVEEVPHVRQTQDF
GTRYYNLEAGPSSSNFGQGCYDLETDPSSSYIHGHGCGRGEHNGYLYYEAPTIRAAR