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PI0010619 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010619
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr01:21585965..21586474
RNA-Seq ExpressionPI0010619
SyntenyPI0010619
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]1.2e-6171.18Show/hide
Query:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQ   +KV KCGVC LVGHPNDKCP+++E+ N++RKYDP+ NTYN+GW+DNPNL+WGNDNQ+  QA  +S+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK
         EMKQQ++QLTTAISK++GKGKLPAQPD+ANVSAISLRSGKIL+TP++ E+KVTS    L  KNE +++K
Subjt:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK

KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]8.1e-6174.19Show/hide
Query:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQ    KV KCGVCGLVGHPNDKC  ++E+ N++R+YDPHSNTYN+GW+DNPNL+WGNDNQ+  QA S+S+NQGTNLED++KAL TNT+SFQ
Subjt:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKVTST
         EMKQQ++QLTTAISK++GKGKLPAQPD+ANVSAISLRSGKIL+TP+++EK   T
Subjt:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKVTST

KAA0067359.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.1e-6171.6Show/hide
Query:  TTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQN
        TTLLTSFVQ   +KV KCGVCGLVGH N+KCP+++E+ N++R+YDPHSNTYN+GW+DNPNL+WGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ 
Subjt:  TTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQN

Query:  EMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK
        EMKQQ++QLTTAISK++GKGKLPAQ DHANVSAISLRSGKIL+TP++ E+KVTS    L  KNE +++K
Subjt:  EMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK

TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.6e-6271.76Show/hide
Query:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQ    KV KCGVCGLVGHPNDKCP ++E+ N++R+YDPHSNTYN+GW+DN NL+WGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK
         +MKQQ++QLTTAISK++GKGKLPAQPDHANVSAISLRSGKIL+TP++ E+K+TS    L  KNE +++K
Subjt:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK

XP_008465649.1 PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]8.1e-6169.41Show/hide
Query:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQ  ++KV KCGVCGLVG+PNDKCP ++E+ N++R+YDPH NTYN GW+DNPNL+WGNDNQ+  QA  +S+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK
         +MKQQ++QLTT ISK++GKGKLPAQPDH NVSAISLRSGKIL+TP++ E+KVTS    L  KN+ +++K
Subjt:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK

TrEMBL top hitse value%identityAlignment
A0A1S3CQU8 uncharacterized protein LOC1035032913.9e-6169.41Show/hide
Query:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQ  ++KV KCGVCGLVG+PNDKCP ++E+ N++R+YDPH NTYN GW+DNPNL+WGNDNQ+  QA  +S+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK
         +MKQQ++QLTT ISK++GKGKLPAQPDH NVSAISLRSGKIL+TP++ E+KVTS    L  KN+ +++K
Subjt:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK

A0A5A7V0Q7 Retrotransposon gag protein3.9e-6174.19Show/hide
Query:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQ    KV KCGVCGLVGHPNDKC  ++E+ N++R+YDPHSNTYN+GW+DNPNL+WGNDNQ+  QA S+S+NQGTNLED++KAL TNT+SFQ
Subjt:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKVTST
         EMKQQ++QLTTAISK++GKGKLPAQPD+ANVSAISLRSGKIL+TP+++EK   T
Subjt:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKVTST

A0A5A7VQ60 Retrotransposon gag protein1.0e-6171.6Show/hide
Query:  TTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQN
        TTLLTSFVQ   +KV KCGVCGLVGH N+KCP+++E+ N++R+YDPHSNTYN+GW+DNPNL+WGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ 
Subjt:  TTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQN

Query:  EMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK
        EMKQQ++QLTTAISK++GKGKLPAQ DHANVSAISLRSGKIL+TP++ E+KVTS    L  KNE +++K
Subjt:  EMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK

A0A5D3CB46 Retrotransposon gag protein2.7e-6271.76Show/hide
Query:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQ    KV KCGVCGLVGHPNDKCP ++E+ N++R+YDPHSNTYN+GW+DN NL+WGNDNQ+  QA S+S+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK
         +MKQQ++QLTTAISK++GKGKLPAQPDHANVSAISLRSGKIL+TP++ E+K+TS    L  KNE +++K
Subjt:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK

E5GBZ4 Retrotransposon gag protein6.0e-6271.18Show/hide
Query:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQ   +KV KCGVC LVGHPNDKCP+++E+ N++RKYDP+ NTYN+GW+DNPNL+WGNDNQ+  QA  +S+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK
         EMKQQ++QLTTAISK++GKGKLPAQPD+ANVSAISLRSGKIL+TP++ E+KVTS    L  KNE +++K
Subjt:  NEMKQQISQLTTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSS-EEKVTSTSNLLEDKNEKRKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCACTTTACTAACCTCTTTTGTGCAAGATGGATCTGTGAAAGTTGCAAAGTGCGGGGTGTGCGGTCTAGTTGGACATCCTAATGACAAGTGTCCTGACCTTGTGGA
AGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAACACTTACAACGCCGGTTGGAAGGACAACCCTAACCTTAAATGGGGAAACGATAACCAACGACCCGCACAAG
CAACTTCATCTTCAAACAATCAAGGTACTAATTTGGAAGACTTAGTAAAAGCTCTTGCTACTAATACAATTTCTTTTCAGAATGAAATGAAACAACAAATATCTCAACTG
ACAACTGCAATAAGCAAACTAGAAGGCAAAGGCAAGCTTCCAGCTCAGCCTGATCACGCAAACGTAAGTGCCATCTCGCTTAGGAGCGGTAAAATTCTGGAAACCCCTTC
TAGCGAGGAAAAGGTAACTTCTACCTCCAACCTTCTAGAAGACAAAAATGAGAAAAGGAAGAAAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCACTTTACTAACCTCTTTTGTGCAAGATGGATCTGTGAAAGTTGCAAAGTGCGGGGTGTGCGGTCTAGTTGGACATCCTAATGACAAGTGTCCTGACCTTGTGGA
AGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAACACTTACAACGCCGGTTGGAAGGACAACCCTAACCTTAAATGGGGAAACGATAACCAACGACCCGCACAAG
CAACTTCATCTTCAAACAATCAAGGTACTAATTTGGAAGACTTAGTAAAAGCTCTTGCTACTAATACAATTTCTTTTCAGAATGAAATGAAACAACAAATATCTCAACTG
ACAACTGCAATAAGCAAACTAGAAGGCAAAGGCAAGCTTCCAGCTCAGCCTGATCACGCAAACGTAAGTGCCATCTCGCTTAGGAGCGGTAAAATTCTGGAAACCCCTTC
TAGCGAGGAAAAGGTAACTTCTACCTCCAACCTTCTAGAAGACAAAAATGAGAAAAGGAAGAAAAAGTAG
Protein sequenceShow/hide protein sequence
MTTLLTSFVQDGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWKDNPNLKWGNDNQRPAQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQISQL
TTAISKLEGKGKLPAQPDHANVSAISLRSGKILETPSSEEKVTSTSNLLEDKNEKRKKK