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PI0010666 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010666
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr11:13274334..13274636
RNA-Seq ExpressionPI0010666
SyntenyPI0010666
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34247.1 ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]4.5e-2769.07Show/hide
Query:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
        +ESP+GGIIIR+NPLF++STPAS+LS+K S LEVV VMM DVT +A +TEMERK N LMKV+EE DHEI  L+DQ KA ET +SSQTP +K  DKGK
Subjt:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.5e-2769.07Show/hide
Query:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
        +ESP+GGI+IR+NPLF++STPAS+LS+KES LEVV VMM DVT +A + EMERK N LMKVVEE DHEI  L+DQ KA ET++SSQTP +K  DKGK
Subjt:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
KAA0066007.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.2e-2772Show/hide
Query:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGKTGL
        MES +GGIIIRENPLFD+STPASDLSEKES LEVV VMM DVT +  +TEMERK N LMKVV+E DHE   L+DQ KA ETAKSS+T  +K NDKGK  L
Subjt:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGKTGL
KAA0068200.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.5e-2770.1Show/hide
Query:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
        +ESP+G IIIR+NPLF++STPAS+LS+KES LEVV+VMM DVT +A + EMERK N LMKVVEE DHEI VL+DQ KA ET +SSQTP +K  DKGK
Subjt:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
TYK04575.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.5e-2770.1Show/hide
Query:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
        +ESP+GGIIIR+NPLF++STPAS+LS+KES LEVV VMM DVT +A + EMERK N LMKVVEE DHEI  L+DQ KA ET +SSQTP +K  DKGK
Subjt:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
TrEMBL top hitse value%identityAlignment
A0A5A7SRE2 Ty3-gypsy retrotransposon protein2.2e-2769.07Show/hide
Query:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
        +ESP+GGI+IR+NPLF++STPAS+LS+KES LEVV VMM DVT +A + EMERK N LMKVVEE DHEI  L+DQ KA ET++SSQTP +K  DKGK
Subjt:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
A0A5A7SXL9 Ty3-gypsy retrotransposon protein2.2e-2769.07Show/hide
Query:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
        +ESP+GGIIIR+NPLF++STPAS+LS+K S LEVV VMM DVT +A +TEMERK N LMKV+EE DHEI  L+DQ KA ET +SSQTP +K  DKGK
Subjt:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
A0A5A7VFZ5 Ty3-gypsy retrotransposon protein5.8e-2872Show/hide
Query:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGKTGL
        MES +GGIIIRENPLFD+STPASDLSEKES LEVV VMM DVT +  +TEMERK N LMKVV+E DHE   L+DQ KA ETAKSS+T  +K NDKGK  L
Subjt:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGKTGL
A0A5D3BZH8 Ty3-gypsy retrotransposon protein2.2e-2770.1Show/hide
Query:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
        +ESP+GGIIIR+NPLF++STPAS+LS+KES LEVV VMM DVT +A + EMERK N LMKVVEE DHEI  L+DQ KA ET +SSQTP +K  DKGK
Subjt:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
A0A5D3DCB4 Ty3-gypsy retrotransposon protein1.7e-2770.1Show/hide
Query:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
        +ESP+G IIIR+NPLF++STPAS+LS+KES LEVV+VMM DVT +A + EMERK N LMKVVEE DHEI VL+DQ KA ET +SSQTP +K  DKGK
Subjt:  MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCTCCTGAAGGCGGGATCATCATTAGAGAGAATCCTTTGTTTGACAGCTCTACTCCTGCTTCTGATCTATCAGAGAAAGAATCAGACCTTGAAGTAGTGTATGT
CATGATGACAGATGTAACAACTAAGGCAGCCATCACAGAGATGGAGAGGAAATCAAATATTCTAATGAAAGTTGTTGAAGAGTGCGATCATGAAATCGTTGTCTTGAGAG
ATCAAAAGAAAGCTAGTGAAACTGCTAAGTCGAGTCAAACTCCCGCTATTAAAGTTAATGATAAAGGGAAAACTGGGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATCTCCTGAAGGCGGGATCATCATTAGAGAGAATCCTTTGTTTGACAGCTCTACTCCTGCTTCTGATCTATCAGAGAAAGAATCAGACCTTGAAGTAGTGTATGT
CATGATGACAGATGTAACAACTAAGGCAGCCATCACAGAGATGGAGAGGAAATCAAATATTCTAATGAAAGTTGTTGAAGAGTGCGATCATGAAATCGTTGTCTTGAGAG
ATCAAAAGAAAGCTAGTGAAACTGCTAAGTCGAGTCAAACTCCCGCTATTAAAGTTAATGATAAAGGGAAAACTGGGTTGTAG
Protein sequenceShow/hide protein sequence
MESPEGGIIIRENPLFDSSTPASDLSEKESDLEVVYVMMTDVTTKAAITEMERKSNILMKVVEECDHEIVVLRDQKKASETAKSSQTPAIKVNDKGKTGL