; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0010686 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010686
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr04:24846321..24847469
RNA-Seq ExpressionPI0010686
SyntenyPI0010686
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040852.1 hypothetical protein E6C27_scaffold333G00770 [Cucumis melo var. makuwa]1.5e-3947.27Show/hide
Query:  MLKSSYNQIKTTLDIMANNNEEWDEDDFSNHRGGRGKSEKELDKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQAVNQMDEMGCVGCGGPHNTDTCP
        ML+SSY QIKTTLD + NN++E  +DD       RG+++  +D+NV+VALQGQ+  M  LL+SMA+ QV+A  + +QAV Q+DEM  VGCG PH TD C 
Subjt:  MLKSSYNQIKTTLDIMANNNEEWDEDDFSNHRGGRGKSEKELDKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQAVNQMDEMGCVGCGGPHNTDTCP

Query:  LNTKIFV----------------------HQNNRSQHPLY----QQQNTTTTPSSSSSMENLLYEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQK
        LN +I                        H+      P Y     QQ TT TPSS SSM  LL +YMQ+ DA +Q+Q TSI NLE+ LG+LA DF  R  
Subjt:  LNTKIFV----------------------HQNNRSQHPLY----QQQNTTTTPSSSSSMENLLYEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQK

Query:  GSLPSNIETPSQAGGSGKEK
        GSLPSNIE P+   G  K K
Subjt:  GSLPSNIETPSQAGGSGKEK

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]1.2e-5448.8Show/hide
Query:  MGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNH------RGGRG
        M  +Q+DRENL   W RFKRM+K CPH+ IP+C+LM+ FYFGL+K T Q+A+ VF   ML+SSYNQIK  LD MA+N++EW ++ F +       +G RG
Subjt:  MGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNH------RGGRG

Query:  KSEKELDKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQAVNQMDEMGCVGCGGPHNTDTCPLNTKIFVHQNNRSQHPLYQQQNTTTTPSSSSSMENL
        + E  +D +++VALQGQ+I M N+L+SMA+LQVN   SS+Q V Q++EMGCVGC  PHNT+ CPLNT+I  +  N    P++      TT  SS      
Subjt:  KSEKELDKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQAVNQMDEMGCVGCGGPHNTDTCPLNTKIFVHQNNRSQHPLYQQQNTTTTPSSSSSMENL

Query:  LYEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQKGSLPSNIETPSQ
                      QA+SI N+E+QLG+L +DF  R K S PSN ETP+Q
Subjt:  LYEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQKGSLPSNIETPSQ

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]1.8e-3757.75Show/hide
Query:  MGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNHRGGRGKSEKEL
        M  +Q+D+EN+H  WSRFKR+VKACP +GIP+C+ M+VFYFGL+K T Q  + +FV  ML+SSYNQIK TLD M+NN++EWD+  F +    RG++++ L
Subjt:  MGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNHRGGRGKSEKEL

Query:  DKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQAVNQMDE
        DK+VVV LQGQMIAMNNLL+SM + QVNA ++ I AV Q+++
Subjt:  DKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQAVNQMDE

XP_030494802.1 uncharacterized protein LOC115710583 [Cannabis sativa]1.0e-3737.63Show/hide
Query:  PHENARRRKELMGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNH
        P  NA+ R E+M  QQ + E    AW RFK +++ CPH+GIP CI ++ FY GLN  ++   DA    ++L  SYN+    L+ +A+NN +W     +N 
Subjt:  PHENARRRKELMGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNH

Query:  RGGRGKSEKELDKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQ--AVNQMDEMGCVGCGGPHNTDTCPLNTKIFVH-----------QNNRSQHPLY
             K    L+ + + AL  QM +M N+LK+M +        S+Q  A  Q  E+ CV CG  H  + CP N     +           Q  +S  P +
Subjt:  RGGRGKSEKELDKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQ--AVNQMDEMGCVGCGGPHNTDTCPLNTKIFVH-----------QNNRSQHPLY

Query:  QQQNTTTTP-----SSSSSMENLLYEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQKGSLPSNIETPSQAGGSGKEKFQAVTL
         QQ     P     S +SS+E+L+ +YM KNDA++Q+QA S+ NLE+QLG+LAND   R +G+LPS+ E P +    GKE  +AVTL
Subjt:  QQQNTTTTP-----SSSSSMENLLYEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQKGSLPSNIETPSQAGGSGKEKFQAVTL

XP_038889363.1 uncharacterized protein LOC120079279 [Benincasa hispida]2.8e-3535.49Show/hide
Query:  PHENARRRKELMGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNH
        P  NARRRK+++  +Q + E L   W   +R+VK C H GIP C+LMK FY GLN+ TQ  ADA      +  +Y + K  L  ++ N ++  +D +   
Subjt:  PHENARRRKELMGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNH

Query:  RGGRGKSEKELDKNVV-----VALQGQMIAMNNLLKSMAILQVNATDSSIQ--AVNQMDEMGCVGCGGPH-----------NTDTCPLNTKIFVHQNNRS
         GGRG   +  D  +V       L  QM A+ +LL++MA+ Q   +  S Q  A  Q+  + CV CGG H           +    P N +    +N  +
Subjt:  RGGRGKSEKELDKNVV-----VALQGQMIAMNNLLKSMAILQVNATDSSIQ--AVNQMDEMGCVGCGGPH-----------NTDTCPLNTKIFVHQNNRS

Query:  QHPLYQQQN------------TTTTPSSSSSMENLLYEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQKGSLPSNIETPSQAGGSGKEK
          P +Q QN            ++ T ++SSS+E+LL +Y++KND ++Q+Q +SI NLE+Q+G+LA +   R  G+LPSN E P   G  GKE+
Subjt:  QHPLYQQQN------------TTTTPSSSSSMENLLYEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQKGSLPSNIETPSQAGGSGKEK

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein8.6e-3857.75Show/hide
Query:  MGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNHRGGRGKSEKEL
        M  +Q+D+EN+H  WSRFKR+VKACP +GIP+C+ M+VFYFGL+K T Q  + +FV  ML+SSYNQIK TLD M+NN++EWD+  F +    RG++++ L
Subjt:  MGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNHRGGRGKSEKEL

Query:  DKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQAVNQMDE
        DK+VVV LQGQMIAMNNLL+SM + QVNA ++ I AV Q+++
Subjt:  DKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQAVNQMDE

A0A5B6VWJ0 Retroelement pol polyprotein-like3.9e-3030.37Show/hide
Query:  PHENARRRKELMGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNH
        P +NA+ R E+      D E+L+ AW RFK +++ CPH+GIP CI ++ FY GL   T+   DA    ++L  SYN+    ++ +A+NN +W     ++ 
Subjt:  PHENARRRKELMGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNH

Query:  RGGRGKSEKELDKNVVVALQGQMIAMNNLLKSMAILQVNATDS-SIQAVNQMDEMGCVGCGGPHNTDTCPLNTKIFVHQNNRSQH---------------
        R   G  E +     + +L  Q+ +++++ K+   L  N ++S + Q  NQ + +  V CG  H  + CP N +   +  N++Q+               
Subjt:  RGGRGKSEKELDKNVVVALQGQMIAMNNLLKSMAILQVNATDS-SIQAVNQMDEMGCVGCGGPHNTDTCPLNTKIFVHQNNRSQH---------------

Query:  ----------------PLYQQQNTTTTPS------------SSSSMENLLYEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQKGSLPSNIETPSQA
                         +Y Q   T  P+            +S+S+E+LL  YM KNDAL+Q+QA ++ NLE Q+G+LA +   R +G+LPS+ E P   
Subjt:  ----------------PLYQQQNTTTTPS------------SSSSMENLLYEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQKGSLPSNIETPSQA

Query:  GGSGKEKFQAVTLCNRRNLTICDPDS
           GKE  +A+TL   R+  I +P++
Subjt:  GGSGKEKFQAVTLCNRRNLTICDPDS

A0A5D3CC26 Uncharacterized protein5.9e-5548.8Show/hide
Query:  MGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNH------RGGRG
        M  +Q+DRENL   W RFKRM+K CPH+ IP+C+LM+ FYFGL+K T Q+A+ VF   ML+SSYNQIK  LD MA+N++EW ++ F +       +G RG
Subjt:  MGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNH------RGGRG

Query:  KSEKELDKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQAVNQMDEMGCVGCGGPHNTDTCPLNTKIFVHQNNRSQHPLYQQQNTTTTPSSSSSMENL
        + E  +D +++VALQGQ+I M N+L+SMA+LQVN   SS+Q V Q++EMGCVGC  PHNT+ CPLNT+I  +  N    P++      TT  SS      
Subjt:  KSEKELDKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQAVNQMDEMGCVGCGGPHNTDTCPLNTKIFVHQNNRSQHPLYQQQNTTTTPSSSSSMENL

Query:  LYEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQKGSLPSNIETPSQ
                      QA+SI N+E+QLG+L +DF  R K S PSN ETP+Q
Subjt:  LYEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQKGSLPSNIETPSQ

A0A5D3D2S0 Uncharacterized protein7.0e-4047.27Show/hide
Query:  MLKSSYNQIKTTLDIMANNNEEWDEDDFSNHRGGRGKSEKELDKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQAVNQMDEMGCVGCGGPHNTDTCP
        ML+SSY QIKTTLD + NN++E  +DD       RG+++  +D+NV+VALQGQ+  M  LL+SMA+ QV+A  + +QAV Q+DEM  VGCG PH TD C 
Subjt:  MLKSSYNQIKTTLDIMANNNEEWDEDDFSNHRGGRGKSEKELDKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQAVNQMDEMGCVGCGGPHNTDTCP

Query:  LNTKIFV----------------------HQNNRSQHPLY----QQQNTTTTPSSSSSMENLLYEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQK
        LN +I                        H+      P Y     QQ TT TPSS SSM  LL +YMQ+ DA +Q+Q TSI NLE+ LG+LA DF  R  
Subjt:  LNTKIFV----------------------HQNNRSQHPLY----QQQNTTTTPSSSSSMENLLYEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQK

Query:  GSLPSNIETPSQAGGSGKEK
        GSLPSNIE P+   G  K K
Subjt:  GSLPSNIETPSQAGGSGKEK

A0A6J1G7Q6 uncharacterized protein LOC1114515989.5e-2930.82Show/hide
Query:  PHENARRRKELMGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNH
        P  +AR R E++  Q+ + E L  AW RFK  ++ CPH+G+P CI ++ FY GLN  T+Q  DA     +L  +YN+    L+ +A+NN +W      + 
Subjt:  PHENARRRKELMGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDDFSNH

Query:  RGGRGKSEKE-LDKNVVVALQGQMIAMNNLLKSMAILQ---VNATDSSIQAVNQMDEMGCVGCGGPHNTDTCPLN-TKIFVHQNNRSQ------------
        R   GK  +E L+ + + ++  Q+ +M N+L+++A  Q   + A   +   + Q     CV CG  H  D CP N   IF   N  SQ            
Subjt:  RGGRGKSEKE-LDKNVVVALQGQMIAMNNLLKSMAILQ---VNATDSSIQAVNQMDEMGCVGCGGPHNTDTCPLN-TKIFVHQNNRSQ------------

Query:  ------HP------------------------------LYQQQNTTTTPSSSSS--------MENLLYEYMQKNDALLQNQATSICNLEVQLGKLANDFF
              HP                               Y  Q  TT    +S         +E+L+ EYM +NDA++Q+Q  S+ NLEVQ+G+LAN+  
Subjt:  ------HP------------------------------LYQQQNTTTTPSSSSS--------MENLLYEYMQKNDALLQNQATSICNLEVQLGKLANDFF

Query:  ERQKGSLPSNIETPSQAG
         R  G LP++ E P + G
Subjt:  ERQKGSLPSNIETPSQAG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCAACTAATAGAGAAATTCATGAAGAAGTTTCTTCCCCCCATGAGAATGCCAGAAGAAGAAAAGAGCTTATGGGTTTGCAACAAAAGGATAGAGAAAACTTACA
TCACGCGTGGAGTAGGTTTAAAAGAATGGTGAAAGCGTGCCCTCACAATGGCATCCCTAAATGCATATTGATGAAGGTGTTTTATTTTGGGCTTAACAAGGGAACACAGC
AAACTGCTGACGCTGTGTTTGTAGAGAGCATGTTGAAAAGCTCATACAACCAGATTAAGACGACGCTTGATATTATGGCCAACAATAATGAAGAGTGGGATGAAGATGAT
TTCAGTAATCACCGAGGAGGAAGAGGAAAAAGCGAGAAAGAATTGGATAAGAACGTCGTGGTGGCATTGCAAGGACAGATGATTGCGATGAATAATCTGTTGAAATCAAT
GGCGATTTTGCAAGTTAACGCCACAGACAGCTCCATTCAGGCAGTCAATCAAATGGACGAAATGGGATGCGTGGGATGCGGCGGTCCTCATAACACCGACACATGCCCAC
TGAATACAAAGATTTTCGTACACCAAAACAATAGATCACAGCATCCTCTGTACCAACAACAGAACACCACCACTACTCCATCCTCATCATCATCAATGGAGAACCTCCTC
TACGAATACATGCAGAAAAATGATGCCCTTCTCCAGAATCAAGCCACATCTATTTGCAATCTGGAAGTACAATTAGGGAAATTGGCCAACGACTTCTTCGAAAGGCAAAA
AGGATCACTCCCAAGCAACATTGAAACACCTAGTCAGGCGGGAGGATCCGGGAAAGAGAAGTTTCAAGCAGTGACACTATGCAACAGAAGGAATTTGACCATCTGCGATC
CTGATTCTGAACGTAGAAATCTCACTCCTATCTCTACTGTCGAGATCGGCACAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATCAACTAATAGAGAAATTCATGAAGAAGTTTCTTCCCCCCATGAGAATGCCAGAAGAAGAAAAGAGCTTATGGGTTTGCAACAAAAGGATAGAGAAAACTTACA
TCACGCGTGGAGTAGGTTTAAAAGAATGGTGAAAGCGTGCCCTCACAATGGCATCCCTAAATGCATATTGATGAAGGTGTTTTATTTTGGGCTTAACAAGGGAACACAGC
AAACTGCTGACGCTGTGTTTGTAGAGAGCATGTTGAAAAGCTCATACAACCAGATTAAGACGACGCTTGATATTATGGCCAACAATAATGAAGAGTGGGATGAAGATGAT
TTCAGTAATCACCGAGGAGGAAGAGGAAAAAGCGAGAAAGAATTGGATAAGAACGTCGTGGTGGCATTGCAAGGACAGATGATTGCGATGAATAATCTGTTGAAATCAAT
GGCGATTTTGCAAGTTAACGCCACAGACAGCTCCATTCAGGCAGTCAATCAAATGGACGAAATGGGATGCGTGGGATGCGGCGGTCCTCATAACACCGACACATGCCCAC
TGAATACAAAGATTTTCGTACACCAAAACAATAGATCACAGCATCCTCTGTACCAACAACAGAACACCACCACTACTCCATCCTCATCATCATCAATGGAGAACCTCCTC
TACGAATACATGCAGAAAAATGATGCCCTTCTCCAGAATCAAGCCACATCTATTTGCAATCTGGAAGTACAATTAGGGAAATTGGCCAACGACTTCTTCGAAAGGCAAAA
AGGATCACTCCCAAGCAACATTGAAACACCTAGTCAGGCGGGAGGATCCGGGAAAGAGAAGTTTCAAGCAGTGACACTATGCAACAGAAGGAATTTGACCATCTGCGATC
CTGATTCTGAACGTAGAAATCTCACTCCTATCTCTACTGTCGAGATCGGCACAATATAA
Protein sequenceShow/hide protein sequence
MGSTNREIHEEVSSPHENARRRKELMGLQQKDRENLHHAWSRFKRMVKACPHNGIPKCILMKVFYFGLNKGTQQTADAVFVESMLKSSYNQIKTTLDIMANNNEEWDEDD
FSNHRGGRGKSEKELDKNVVVALQGQMIAMNNLLKSMAILQVNATDSSIQAVNQMDEMGCVGCGGPHNTDTCPLNTKIFVHQNNRSQHPLYQQQNTTTTPSSSSSMENLL
YEYMQKNDALLQNQATSICNLEVQLGKLANDFFERQKGSLPSNIETPSQAGGSGKEKFQAVTLCNRRNLTICDPDSERRNLTPISTVEIGTI