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PI0010710 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010710
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr04:20875896..20876505
RNA-Seq ExpressionPI0010710
SyntenyPI0010710
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]1.9e-6175.5Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ
        MTTLLTSFVQG  +KV KCGVC L+GHPNDKCP+++E+ N++RKYDP+GNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALA+NT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
         EMKQQM+QLT AISK++GKGKLPAQPD+ANVS ISLRSGKIL  P ++EK
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
KAA0038454.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.2e-6074.83Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ
        MT LLTSFVQG  +KV KCGVC L+GH NDKCP+++E+ N++RKYDP+GNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALA+NT SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
         EMKQQM+QLT AISK++GKGKLPAQPDHANVS ISLRSGKIL  P ++EK
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
KAA0051761.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.3e-6074.83Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ
        MT LLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALA+NT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
         EMKQQM+QLT  ISK++GKGKL AQPDHANVSVISLRS KIL  P ++EK
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
XP_008465649.1 PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]9.6e-6174.17Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ
        MTTLLTSFVQG  +KV KCGVCGL+G+PNDKCP ++E+ N++R+YDPHGNTYN GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALA+NT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
         +MKQQM+QLT  ISK++GKGKLPAQPDH NVS ISLRSGKIL  P ++EK
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
XP_016902871.1 PREDICTED: uncharacterized protein LOC107991910 [Cucumis melo]1.3e-6074.83Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ
        MT LLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALA+NT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
         EMKQQM+QLT  ISK++GKGKL AQPDHANVSVISLRS KIL  P ++EK
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
TrEMBL top hitse value%identityAlignment
A0A1S3CQU8 uncharacterized protein LOC1035032914.7e-6174.17Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ
        MTTLLTSFVQG  +KV KCGVCGL+G+PNDKCP ++E+ N++R+YDPHGNTYN GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALA+NT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
         +MKQQM+QLT  ISK++GKGKLPAQPDH NVS ISLRSGKIL  P ++EK
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
A0A1S4E3R2 uncharacterized protein LOC1079919106.1e-6174.83Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ
        MT LLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALA+NT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
         EMKQQM+QLT  ISK++GKGKL AQPDHANVSVISLRS KIL  P ++EK
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
A0A5D3CFE7 Retrotransposon gag protein3.0e-6074.17Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ
        MTTLLTSFVQG   KV KCGVCGL+GHPNDKCP+++E+ N++R+YDPHGNTYN GWRD PNLRWGN+ Q  TQA  +S+NQGTNLED++KAL +NT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
         EMKQQM+QLT AISK++GKGKLPAQPDHANVS ISLRSGKIL  P ++EK
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
A0A5D3DCG3 Retrotransposon gag protein6.1e-6174.83Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ
        MT LLTSFVQG  +KV KCGVCGL+GHPNDKCP+++E+ N+++KYDPHGNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALA+NT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
         EMKQQM+QLT  ISK++GKGKL AQPDHANVSVISLRS KIL  P ++EK
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
E5GBZ4 Retrotransposon gag protein9.4e-6275.5Show/hide
Query:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ
        MTTLLTSFVQG  +KV KCGVC L+GHPNDKCP+++E+ N++RKYDP+GNTYN+GWRDNPNLRWGN+NQ+ TQA P+S+NQGTNLED++KALA+NT+SFQ
Subjt:  MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQ

Query:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
         EMKQQM+QLT AISK++GKGKLPAQPD+ANVS ISLRSGKIL  P ++EK
Subjt:  NEMKQQMSQLTNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACTCTACTAACCTCTTTTGTGCAAGGTGGAAATGTGAAAGTTGCCAAATGTGGAGTATGTGGACTAATAGGACATCCTAATGATAAGTGCCCTGACCTAGTGGA
AGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGAAATACTTACAATGCCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAACAATAATCAACAACCCACGCAAG
CAACTCCTTCTTCAAACAATCAAGGTACAAATTTGGAGGATTTGGTAAAAGCTCTTGCCAGTAATACAATTTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCAATTA
ACAAATGCAATAAGCAAGTTAGAAGGCAAAGGTAAGCTGCCAGCTCAACCTGATCATGCAAATGTAAGTGTCATCTCACTTAGAAGTGGTAAAATTCTGCAACCTCCTCC
AAGTGAAGAAAAGATTAATTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTACTCTACTAACCTCTTTTGTGCAAGGTGGAAATGTGAAAGTTGCCAAATGTGGAGTATGTGGACTAATAGGACATCCTAATGATAAGTGCCCTGACCTAGTGGA
AGAGGCAAATGTCATTAGGAAGTACGATCCTCATGGAAATACTTACAATGCCGGTTGGAGAGACAATCCAAACCTTAGATGGGGAAACAATAATCAACAACCCACGCAAG
CAACTCCTTCTTCAAACAATCAAGGTACAAATTTGGAGGATTTGGTAAAAGCTCTTGCCAGTAATACAATTTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCAATTA
ACAAATGCAATAAGCAAGTTAGAAGGCAAAGGTAAGCTGCCAGCTCAACCTGATCATGCAAATGTAAGTGTCATCTCACTTAGAAGTGGTAAAATTCTGCAACCTCCTCC
AAGTGAAGAAAAGATTAATTCCTAA
Protein sequenceShow/hide protein sequence
MTTLLTSFVQGGNVKVAKCGVCGLIGHPNDKCPDLVEEANVIRKYDPHGNTYNAGWRDNPNLRWGNNNQQPTQATPSSNNQGTNLEDLVKALASNTISFQNEMKQQMSQL
TNAISKLEGKGKLPAQPDHANVSVISLRSGKILQPPPSEEKINS