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PI0010730 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010730
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr10:8294598..8295119
RNA-Seq ExpressionPI0010730
SyntenyPI0010730
Gene Ontology termsGO:0005488 - binding (molecular function)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062079.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.1e-0538.71Show/hide
Query:  MTFED---NMSTNSLLFQ-QIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKD
        M+ ED    ++TNSL FQ + +  +K  K+ ++   TFQQE R  F +  NQ++QLA+ V KL+ KGK+L+QP+ +N++ +S  +     R+D
Subjt:  MTFED---NMSTNSLLFQ-QIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKD

XP_031096820.1 uncharacterized protein LOC116001056 [Ipomoea triloba]8.2e-0641.11Show/hide
Query:  MTFEDNMSTNSLLFQQIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKDE
        M+ ED + + ++     Q+ Q+  +  ++Q   FQQETR     L N++SQLASTVS+L+S+GK+ SQ  V    NVSA+TL +G+  +E
Subjt:  MTFEDNMSTNSLLFQQIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKDE

XP_031097052.1 uncharacterized protein LOC116001306 [Ipomoea triloba]4.1e-0541.49Show/hide
Query:  MTFED---NMSTNSLLFQQ-IQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKDE
        M+ ED   +++TN+  FQQ  Q+ Q+  +  ++Q   FQQETR     L +Q+S+LASTVS+L+S+GK  SQ  V    NVSA+ L + +  +E
Subjt:  MTFED---NMSTNSLLFQQ-IQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKDE

XP_031108716.1 uncharacterized protein LOC116013208 [Ipomoea triloba]2.8e-0642.22Show/hide
Query:  MTFEDNMSTNSLLFQQIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKDE
        M+ ED + + ++     Q+ Q+  +  ++Q   FQQETR     L +Q+SQLASTVS+L+S+GK+ SQP V    NVSA+TL +G+  +E
Subjt:  MTFEDNMSTNSLLFQQIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKDE

XP_031127585.1 uncharacterized protein LOC116029679 [Ipomoea triloba]8.2e-0638.94Show/hide
Query:  MTFED---NMSTNSLLF-QQIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKD-----EK
        M+ ED   +++TN+  F QQ Q+ Q+  +  ++Q   FQQETR     L +Q+SQLASTVS+L+S+GK+ SQ  V    NVS  TL +G+  +     +K
Subjt:  MTFED---NMSTNSLLF-QQIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKD-----EK

Query:  LANHVASRHQEQH
          N      +E H
Subjt:  LANHVASRHQEQH

TrEMBL top hitse value%identityAlignment
A0A5A7V8R3 Retrotransposon gag protein1.5e-0538.71Show/hide
Query:  MTFED---NMSTNSLLFQ-QIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKD
        M+ ED    ++TNSL FQ + +  +K  K+ ++   TFQQE R  F +  NQ++QLA+ V KL+ KGK+L+QP+ +N++ +S  +     R+D
Subjt:  MTFED---NMSTNSLLFQ-QIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKD

A0A5D3BZ22 Retrotransposon gag protein4.4e-0537.63Show/hide
Query:  MTFEDNMST---NSLLFQ-QIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKD
        M+ ED++ T   NSL FQ + +  +K  K+ ++   TFQQ+ R  F +  NQ++QLA+ V KL+ KGK+L+QP+ +N++ +S  +     R+D
Subjt:  MTFEDNMST---NSLLFQ-QIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKD

A0A6A2WV69 Ocs element-binding factor 1-like1.3e-0447.89Show/hide
Query:  LQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKDE
        L++  K L      FQQETR    +L NQ+SQLAS+VS+L+S+GK+ SQ  V    NVSA+TL +G+   E
Subjt:  LQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKDE

A0A6I9T1U5 uncharacterized protein LOC1051609863.7e-0440.24Show/hide
Query:  TNSLLFQQIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKDE
        TN+  FQ  Q+ Q + +  ++Q   FQQ+T+    +L +Q+SQLAS++ KL+S+GK+ SQ  +    NVSA+TL +G+   E
Subjt:  TNSLLFQQIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTTTGAGGATAACATGAGCACTAACTCTTTACTTTTTCAACAGATACAAGAACTTCAGAAGCATAACAAGATCTTAGAGGAGCAAGCCTTGACCTTTCAGCAAGA
AACAAGGGTTGGATTTTCTAGCTTGAGTAACCAAGTTTCTCAACTTGCTTCAACGGTGAGTAAACTCGACTCAAAGGGAAAAATTCTGTCACAACCTAATGTAGCAAATG
TAGCAAATGTAAGTGCTTTAACTCTCCATAATGGGAGGCGAAAAGACGAAAAGTTGGCAAATCACGTAGCATCTAGGCATCAAGAACAACACTATGCGACGATGCCTCGC
TAA
mRNA sequenceShow/hide mRNA sequence
ATGACTTTTGAGGATAACATGAGCACTAACTCTTTACTTTTTCAACAGATACAAGAACTTCAGAAGCATAACAAGATCTTAGAGGAGCAAGCCTTGACCTTTCAGCAAGA
AACAAGGGTTGGATTTTCTAGCTTGAGTAACCAAGTTTCTCAACTTGCTTCAACGGTGAGTAAACTCGACTCAAAGGGAAAAATTCTGTCACAACCTAATGTAGCAAATG
TAGCAAATGTAAGTGCTTTAACTCTCCATAATGGGAGGCGAAAAGACGAAAAGTTGGCAAATCACGTAGCATCTAGGCATCAAGAACAACACTATGCGACGATGCCTCGC
TAA
Protein sequenceShow/hide protein sequence
MTFEDNMSTNSLLFQQIQELQKHNKILEEQALTFQQETRVGFSSLSNQVSQLASTVSKLDSKGKILSQPNVANVANVSALTLHNGRRKDEKLANHVASRHQEQHYATMPR