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PI0010765 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010765
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibosomal RNA small subunit methyltransferase A
Genome locationchr03:2936066..2937527
RNA-Seq ExpressionPI0010765
SyntenyPI0010765
Gene Ontology termsGO:0032259 - methylation (biological process)
GO:0008168 - methyltransferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152600.1 uncharacterized protein LOC101213956 [Cucumis sativus]1.6e-9399.42Show/hide
Query:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI
        MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGAN+SSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI
Subjt:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI

Query:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
        GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
Subjt:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC

XP_008444920.1 PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo]1.6e-9398.83Show/hide
Query:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI
        MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSI
Subjt:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI

Query:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
        GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSA+GNINDSFSAESKKYMEQWLSSLQNC
Subjt:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC

XP_022997281.1 uncharacterized protein LOC111492231 isoform X2 [Cucurbita maxima]3.9e-8794.15Show/hide
Query:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI
        MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSI
Subjt:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI

Query:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
        GWSEPHGPGFQSDD+SDNSFAVLVPCY RIYNDFVDETK S+LSAVGNI+DSFS ESKKYMEQWLSSLQNC
Subjt:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC

XP_023545352.1 uncharacterized protein LOC111804795 isoform X2 [Cucurbita pepo subsp. pepo]5.1e-8793.57Show/hide
Query:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI
        MSVAFPQLSWWL SGKHKEP+SSNGGS+LNASLDTANRETDTLKF LVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSI
Subjt:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI

Query:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
        GWSEPHGPGFQSDD+SDNSFAVLVPCY RIYNDFVDETK S+LSAVGNI+DSFS ESKKYMEQWLSSLQNC
Subjt:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC

XP_038886443.1 uncharacterized protein LOC120076637 [Benincasa hispida]9.6e-94100Show/hide
Query:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI
        MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI
Subjt:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI

Query:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
        GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
Subjt:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC

TrEMBL top hitse value%identityAlignment
A0A1S3BB05 uncharacterized protein LOC1034881217.9e-9498.83Show/hide
Query:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI
        MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSI
Subjt:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI

Query:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
        GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSA+GNINDSFSAESKKYMEQWLSSLQNC
Subjt:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC

A0A6J1HCV2 uncharacterized protein LOC111462457 isoform X13.6e-8693.6Show/hide
Query:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI
        MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSI
Subjt:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI

Query:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFS-AESKKYMEQWLSSLQNC
        GWSEPHGPGFQSDD+SDNSFAVLVPCY RIYNDFVDETK S+LSAVGNI+DSFS AESKKYMEQWLS+LQNC
Subjt:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFS-AESKKYMEQWLSSLQNC

A0A6J1HCV7 uncharacterized protein LOC111462457 isoform X24.2e-8793.57Show/hide
Query:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI
        MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSI
Subjt:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI

Query:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
        GWSEPHGPGFQSDD+SDNSFAVLVPCY RIYNDFVDETK S+LSAVGNI+DSFS ESKKYMEQWLS+LQNC
Subjt:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC

A0A6J1K730 uncharacterized protein LOC111492231 isoform X21.9e-8794.15Show/hide
Query:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI
        MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSI
Subjt:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI

Query:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
        GWSEPHGPGFQSDD+SDNSFAVLVPCY RIYNDFVDETK S+LSAVGNI+DSFS ESKKYMEQWLSSLQNC
Subjt:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC

A0A6J1KDE3 uncharacterized protein LOC111492231 isoform X11.6e-8694.19Show/hide
Query:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI
        MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSI
Subjt:  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSI

Query:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFS-AESKKYMEQWLSSLQNC
        GWSEPHGPGFQSDD+SDNSFAVLVPCY RIYNDFVDETK S+LSAVGNI+DSFS AESKKYMEQWLSSLQNC
Subjt:  GWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFS-AESKKYMEQWLSSLQNC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G38060.1 unknown protein3.7e-1138.94Show/hide
Query:  RETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDE-SDNSFAVLVPCYGRIYNDFVD
        +ET+ LKFP       +  +R  KRK    E         + +V  DG           +WS+GW+EPHGP FQSDDE +D  F VLVPCY R   +   
Subjt:  RETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDE-SDNSFAVLVPCYGRIYNDFVD

Query:  ETKNSILSAVGNI
           N +LSAV N+
Subjt:  ETKNSILSAVGNI

AT4G38060.2 unknown protein1.6e-1741.35Show/hide
Query:  RETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDE-SDNSFAVLVPCYGRIYNDFVD
        +ET+ LKFP       +  +R  KRK    E         + +V  DG           +WS+GW+EPHGP FQSDDE +D  F VLVPCY R   +   
Subjt:  RETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDE-SDNSFAVLVPCYGRIYNDFVD

Query:  ETKNSILSAVGNINDSFSAESKKYMEQWLSSLQ
           N +LSAV N+ +    + K YMEQWLSSLQ
Subjt:  ETKNSILSAVGNINDSFSAESKKYMEQWLSSLQ

AT5G65480.1 unknown protein2.7e-1736.42Show/hide
Query:  MSVAFPQLSWWLWSG---KHKEPRSS--NGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDD
        M+V+FP+L  WL  G   K +E + S   G S+L+ SL    ++T T K       + SSS ++ KR W  R       E D +      G V   E DD
Subjt:  MSVAFPQLSWWLWSG---KHKEPRSS--NGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDD

Query:  SDWSIGWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSL
         +WSIGW EPHGPGF+++D+    F VLVP Y ++ +   ++  N   S         +A   K MEQWLSS+
Subjt:  SDWSIGWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGTTATGGAGTGGGAAGCATAAAGAACCTCGAAGCTCTAATGGTGGGTCTGCTTTAAATGCTTCACTAGATACAGCCAA
CCGGGAAACAGACACTCTAAAATTTCCTTTAGTTAATGGGGCCAACATATCATCCTCATCTAGAAGAGTGAAGAGGAAATGGCACAGTCGAGAAGAGAGAAAAATTGATA
GGGAATACGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCTGAGTCTGATGATTCAGATTGGTCGATTGGATGGTCGGAGCCCCATGGACCTGGATTC
CAGAGCGATGATGAATCAGATAACAGTTTTGCTGTGCTGGTTCCATGTTATGGACGCATTTACAATGATTTTGTGGACGAGACTAAGAATAGTATCTTAAGTGCCGTTGG
GAACATCAACGACAGCTTTTCTGCTGAGAGCAAGAAATATATGGAACAGTGGCTGTCCTCTCTTCAGAACTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGTTATGGAGTGGGAAGCATAAAGAACCTCGAAGCTCTAATGGTGGGTCTGCTTTAAATGCTTCACTAGATACAGCCAA
CCGGGAAACAGACACTCTAAAATTTCCTTTAGTTAATGGGGCCAACATATCATCCTCATCTAGAAGAGTGAAGAGGAAATGGCACAGTCGAGAAGAGAGAAAAATTGATA
GGGAATACGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCTGAGTCTGATGATTCAGATTGGTCGATTGGATGGTCGGAGCCCCATGGACCTGGATTC
CAGAGCGATGATGAATCAGATAACAGTTTTGCTGTGCTGGTTCCATGTTATGGACGCATTTACAATGATTTTGTGGACGAGACTAAGAATAGTATCTTAAGTGCCGTTGG
GAACATCAACGACAGCTTTTCTGCTGAGAGCAAGAAATATATGGAACAGTGGCTGTCCTCTCTTCAGAACTGCTAA
Protein sequenceShow/hide protein sequence
MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGF
QSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC