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PI0010773 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010773
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr07:12184134..12188839
RNA-Seq ExpressionPI0010773
SyntenyPI0010773
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR025525 - hAT-like transposase, RNase-H fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038019.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]5.0e-3338.41Show/hide
Query:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------
        V L  S  +   ++ V  +I VV+NCI LNAGSANALLVGM+NNMKA FEKYWGNNEKNNLLLYVAI+LDP                             
Subjt:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------

Query:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------
                                            NI FD NENVGEDFVYDTIVEEFE D +TTPFEQGSSEIDI LLEAN R               
Subjt:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------

Query:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI
                                                                                    EGFRVVM+NEKELEDLP+FDKLSI
Subjt:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI

Query:  TD
        TD
Subjt:  TD

TYK14363.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]3.8e-3338.41Show/hide
Query:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------
        V L  S  +   ++ V  +I VV+NCI LNAGSANALLVGM+NNMKA FEKYWGNNEKNNLLLYVAI+LDP                             
Subjt:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------

Query:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------
                                            NI FD NENVGEDFVYDTIVEEFE D +TTPFEQGSSEIDI LLEAN R               
Subjt:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------

Query:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI
                                                                                    EGFRVVM+NEKELEDLP+FDKLSI
Subjt:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI

Query:  TD
        TD
Subjt:  TD

TYK16593.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]3.8e-3338.41Show/hide
Query:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------
        V L  S  +   ++ V  +I VV+NCI LNAGSANALLVGM+NNMKA FEKYWGNNEKNNLLLYVAI+LDP                             
Subjt:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------

Query:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------
                                            NI FD NENVGEDFVYDTIVEEFE D +TTPFEQGSSEIDI LLEAN R               
Subjt:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------

Query:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI
                                                                                    EGFRVVM+NEKELEDLP+FDKLSI
Subjt:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI

Query:  TD
        TD
Subjt:  TD

TYK20578.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]3.8e-3338.41Show/hide
Query:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------
        V L  S  +   ++ V  +I VV+NCI LNAGSANALLVGM+NNMKA FEKYWGNNEKNNLLLYVAI+LDP                             
Subjt:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------

Query:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------
                                            NI FD NENVGEDFVYDTIVEEFE D +TTPFEQGSSEIDI LLEAN R               
Subjt:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------

Query:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI
                                                                                    EGFRVVM+NEKELEDLP+FDKLSI
Subjt:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI

Query:  TD
        TD
Subjt:  TD

TYK23433.1 putative transposase [Cucumis melo var. makuwa]3.8e-3338.41Show/hide
Query:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------
        V L  S  +   ++ V  +I VV+NCI LNAGSANALLVGM+NNMKA FEKYWGNNEKNNLLLYVAI+LDP                             
Subjt:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------

Query:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------
                                            NI FD NENVGEDFVYDTIVEEFE D +TTPFEQGSSEIDI LLEAN R               
Subjt:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------

Query:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI
                                                                                    EGFRVVM+NEKELEDLP+FDKLSI
Subjt:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI

Query:  TD
        TD
Subjt:  TD

TrEMBL top hitse value%identityAlignment
A0A5A7T9L0 Zinc finger BED domain-containing protein RICESLEEPER 3-like2.4e-3338.41Show/hide
Query:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------
        V L  S  +   ++ V  +I VV+NCI LNAGSANALLVGM+NNMKA FEKYWGNNEKNNLLLYVAI+LDP                             
Subjt:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------

Query:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------
                                            NI FD NENVGEDFVYDTIVEEFE D +TTPFEQGSSEIDI LLEAN R               
Subjt:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------

Query:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI
                                                                                    EGFRVVM+NEKELEDLP+FDKLSI
Subjt:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI

Query:  TD
        TD
Subjt:  TD

A0A5D3CR68 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.8e-3338.41Show/hide
Query:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------
        V L  S  +   ++ V  +I VV+NCI LNAGSANALLVGM+NNMKA FEKYWGNNEKNNLLLYVAI+LDP                             
Subjt:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------

Query:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------
                                            NI FD NENVGEDFVYDTIVEEFE D +TTPFEQGSSEIDI LLEAN R               
Subjt:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------

Query:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI
                                                                                    EGFRVVM+NEKELEDLP+FDKLSI
Subjt:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI

Query:  TD
        TD
Subjt:  TD

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.8e-3338.41Show/hide
Query:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------
        V L  S  +   ++ V  +I VV+NCI LNAGSANALLVGM+NNMKA FEKYWGNNEKNNLLLYVAI+LDP                             
Subjt:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------

Query:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------
                                            NI FD NENVGEDFVYDTIVEEFE D +TTPFEQGSSEIDI LLEAN R               
Subjt:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------

Query:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI
                                                                                    EGFRVVM+NEKELEDLP+FDKLSI
Subjt:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI

Query:  TD
        TD
Subjt:  TD

A0A5D3DAN8 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.8e-3338.41Show/hide
Query:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------
        V L  S  +   ++ V  +I VV+NCI LNAGSANALLVGM+NNMKA FEKYWGNNEKNNLLLYVAI+LDP                             
Subjt:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------

Query:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------
                                            NI FD NENVGEDFVYDTIVEEFE D +TTPFEQGSSEIDI LLEAN R               
Subjt:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------

Query:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI
                                                                                    EGFRVVM+NEKELEDLP+FDKLSI
Subjt:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI

Query:  TD
        TD
Subjt:  TD

A0A5D3DIL8 Putative transposase1.8e-3338.41Show/hide
Query:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------
        V L  S  +   ++ V  +I VV+NCI LNAGSANALLVGM+NNMKA FEKYWGNNEKNNLLLYVAI+LDP                             
Subjt:  VLLSPSFLISCPASTVTGEIIVVKNCIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPH----------------------------

Query:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------
                                            NI FD NENVGEDFVYDTIVEEFE D +TTPFEQGSSEIDI LLEAN R               
Subjt:  -----------------------------------VNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFR---------------

Query:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI
                                                                                    EGFRVVM+NEKELEDLP+FDKLSI
Subjt:  ---------------------------------------------------------------------------NEGFRVVMDNEKELEDLPNFDKLSI

Query:  TD
        TD
Subjt:  TD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGGGATTTAGAGAATGCGACCCTAGTTCCTGTTGGGCTGCGCGAAGAAGAAGTCTTGGAAGAGCCAGTTGATGACCCACTCCCTAAAGGAAAACAAATTACCTT
TGAGGATGCAGGCGCGACACATGCTCTCTTGCCGTCTAAACAAATCGAAGACCAACCAAGTGAAGCGGCGATCAAGAATAAGGATGATGATTATTACAAGTTCATTAGTG
ATACGATTGGAAAACCAATGATCGATGGACTTGAAGATATTTTTCAAACCCAAGCATATCTGCAAGAATGCGCGATGAGACATGAAAAGCATATTCTGGACTTGGAGTTA
AAAATTGACAATCATCACCAAACACAACATGGTCAACTCGCCTCTGAGATTGGTTTCCTTTCCACGCGATTTTGGTGCTTCCCTTCTAATTCCGGCTTCTGCTTCGGTCC
TTCCACAATCTCAATCTTCGACAATCGGCACAGCAACTTCGTCTCCCTCTGGCACGTCGATATAGCAACTTCCACTCTTCCTCTTCGGCGTCTTCAAATATCGCGAGTTC
GTCTCCCACCGGCACAGCGGCTTCGCGACTCGCGAGTTCTCCTTAGTCCTTCGTTCCTTATTTCTTGTCCCGCCAGCACGGTGACTGGTGAGATTATAGTGGTTAAGAAT
TGTATACATTTGAATGCGGGCAGTGCAAATGCGTTGTTAGTTGGAATGTCTAATAACATGAAGGCAAATTTTGAGAAATATTGGGGAAACAATGAAAAGAACAATTTGTT
GTTGTATGTCGCTATTATGCTGGATCCTCATGTGAATATTTATTTTGATCCAAATGAAAATGTGGGTGAAGATTTTGTCTATGACACGATTGTTGAGGAATTTGAAGGTG
ATGCGACTACTACACCTTTCGAACAGGGGTCATCAGAGATTGATATCTGTTTGTTGGAAGCCAATTTTAGGAACGAAGGATTCCGGGTGGTTATGGATAATGAAAAGGAG
CTTGAAGACCTTCCAAATTTTGATAAGTTGTCAATTACCGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAAGGGATTTAGAGAATGCGACCCTAGTTCCTGTTGGGCTGCGCGAAGAAGAAGTCTTGGAAGAGCCAGTTGATGACCCACTCCCTAAAGGAAAACAAATTACCTT
TGAGGATGCAGGCGCGACACATGCTCTCTTGCCGTCTAAACAAATCGAAGACCAACCAAGTGAAGCGGCGATCAAGAATAAGGATGATGATTATTACAAGTTCATTAGTG
ATACGATTGGAAAACCAATGATCGATGGACTTGAAGATATTTTTCAAACCCAAGCATATCTGCAAGAATGCGCGATGAGACATGAAAAGCATATTCTGGACTTGGAGTTA
AAAATTGACAATCATCACCAAACACAACATGGTCAACTCGCCTCTGAGATTGGTTTCCTTTCCACGCGATTTTGGTGCTTCCCTTCTAATTCCGGCTTCTGCTTCGGTCC
TTCCACAATCTCAATCTTCGACAATCGGCACAGCAACTTCGTCTCCCTCTGGCACGTCGATATAGCAACTTCCACTCTTCCTCTTCGGCGTCTTCAAATATCGCGAGTTC
GTCTCCCACCGGCACAGCGGCTTCGCGACTCGCGAGTTCTCCTTAGTCCTTCGTTCCTTATTTCTTGTCCCGCCAGCACGGTGACTGGTGAGATTATAGTGGTTAAGAAT
TGTATACATTTGAATGCGGGCAGTGCAAATGCGTTGTTAGTTGGAATGTCTAATAACATGAAGGCAAATTTTGAGAAATATTGGGGAAACAATGAAAAGAACAATTTGTT
GTTGTATGTCGCTATTATGCTGGATCCTCATGTGAATATTTATTTTGATCCAAATGAAAATGTGGGTGAAGATTTTGTCTATGACACGATTGTTGAGGAATTTGAAGGTG
ATGCGACTACTACACCTTTCGAACAGGGGTCATCAGAGATTGATATCTGTTTGTTGGAAGCCAATTTTAGGAACGAAGGATTCCGGGTGGTTATGGATAATGAAAAGGAG
CTTGAAGACCTTCCAAATTTTGATAAGTTGTCAATTACCGATTAG
Protein sequenceShow/hide protein sequence
MPRDLENATLVPVGLREEEVLEEPVDDPLPKGKQITFEDAGATHALLPSKQIEDQPSEAAIKNKDDDYYKFISDTIGKPMIDGLEDIFQTQAYLQECAMRHEKHILDLEL
KIDNHHQTQHGQLASEIGFLSTRFWCFPSNSGFCFGPSTISIFDNRHSNFVSLWHVDIATSTLPLRRLQISRVRLPPAQRLRDSRVLLSPSFLISCPASTVTGEIIVVKN
CIHLNAGSANALLVGMSNNMKANFEKYWGNNEKNNLLLYVAIMLDPHVNIYFDPNENVGEDFVYDTIVEEFEGDATTTPFEQGSSEIDICLLEANFRNEGFRVVMDNEKE
LEDLPNFDKLSITD