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PI0010783 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010783
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description40S ribosomal protein S12
Genome locationchr01:26876635..26878872
RNA-Seq ExpressionPI0010783
SyntenyPI0010783
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000530 - Ribosomal protein S12e
IPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147008.1 40S ribosomal protein S12 [Cucumis sativus]2.3e-5499.12Show/hide
Query:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
        MSADE AVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
Subjt:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL

Query:  CKIDSEGKARKVV
        CKIDSEGKARKVV
Subjt:  CKIDSEGKARKVV

XP_022954225.1 40S ribosomal protein S12-like [Cucurbita moschata]3.5e-55100Show/hide
Query:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
        MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
Subjt:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL

Query:  CKIDSEGKARKVV
        CKIDSEGKARKVV
Subjt:  CKIDSEGKARKVV

XP_022991483.1 40S ribosomal protein S12-like [Cucurbita maxima]1.0e-5499.12Show/hide
Query:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
        MSADEV VVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
Subjt:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL

Query:  CKIDSEGKARKVV
        CKIDSEGKARKVV
Subjt:  CKIDSEGKARKVV

XP_023548009.1 40S ribosomal protein S12-like [Cucurbita pepo subsp. pepo]1.0e-5499.12Show/hide
Query:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
        MSADEVAVVAE PAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
Subjt:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL

Query:  CKIDSEGKARKVV
        CKIDSEGKARKVV
Subjt:  CKIDSEGKARKVV

XP_038896811.1 40S ribosomal protein S12-like [Benincasa hispida]1.0e-5499.12Show/hide
Query:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
        MSADEVAVVAEAP PALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
Subjt:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL

Query:  CKIDSEGKARKVV
        CKIDSEGKARKVV
Subjt:  CKIDSEGKARKVV

TrEMBL top hitse value%identityAlignment
A0A0A0KA08 40S ribosomal protein S121.1e-5498.23Show/hide
Query:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
        MSADEVAVVAEAPAPALGEPMDIETALQ+VLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHN NLMTVPSAKTLGEWAGL
Subjt:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL

Query:  CKIDSEGKARKVV
        CKIDSEGKARKVV
Subjt:  CKIDSEGKARKVV

A0A0A0LM61 40S ribosomal protein S121.1e-5499.12Show/hide
Query:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
        MSADE AVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
Subjt:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL

Query:  CKIDSEGKARKVV
        CKIDSEGKARKVV
Subjt:  CKIDSEGKARKVV

A0A5D3BJY5 40S ribosomal protein S121.1e-5499.12Show/hide
Query:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
        MSADE AVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
Subjt:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL

Query:  CKIDSEGKARKVV
        CKIDSEGKARKVV
Subjt:  CKIDSEGKARKVV

A0A6J1GQC3 40S ribosomal protein S121.7e-55100Show/hide
Query:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
        MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
Subjt:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL

Query:  CKIDSEGKARKVV
        CKIDSEGKARKVV
Subjt:  CKIDSEGKARKVV

A0A6J1JWC7 40S ribosomal protein S125.0e-5599.12Show/hide
Query:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
        MSADEV VVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL
Subjt:  MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGL

Query:  CKIDSEGKARKVV
        CKIDSEGKARKVV
Subjt:  CKIDSEGKARKVV

SwissProt top hitse value%identityAlignment
P25398 40S ribosomal protein S122.9e-2861.22Show/hide
Query:  ALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGLCKIDSEGKARKVV
        A G  MD+ TALQ VL+ +L H GL RG+ E+AKA++K  A LCVL  +C++P YVKLV+ALCAEH +NL+ V   K LGEW GLCKID EGK RKVV
Subjt:  ALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGLCKIDSEGKARKVV

Q76I81 40S ribosomal protein S122.9e-2861.22Show/hide
Query:  ALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGLCKIDSEGKARKVV
        A G  MD+ TALQ VL+ +L H GL RG+ E+AKA++K  A LCVL  +C++P YVKLV+ALCAEH +NL+ V   K LGEW GLCKID EGK RKVV
Subjt:  ALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGLCKIDSEGKARKVV

Q9S9P1 40S ribosomal protein S12-13.1e-3870.94Show/hide
Query:  MSADEVAVVAEAP----APALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGE
        MS DE A V   P      A+ E MD+ TAL+L LRK+ A+GG+VRGLHE AK IEK  AQL VL EDCNQPDYVKLVKALCA+H V L+TVPSAKTLGE
Subjt:  MSADEVAVVAEAP----APALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGE

Query:  WAGLCKIDSEGKARKVV
        WAGLCKIDSEG ARKVV
Subjt:  WAGLCKIDSEGKARKVV

Q9SKZ3 40S ribosomal protein S12-21.7e-3970.09Show/hide
Query:  MSADEVAVVAEAP----APALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGE
        MS DE       P    A  + E MD+ TAL+L +RKS A+GG+VRGLHESAK IEK  AQLCVL EDCNQPDYVKLVKALCA+H++ L+TVPSAKTLGE
Subjt:  MSADEVAVVAEAP----APALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGE

Query:  WAGLCKIDSEGKARKVV
        WAGLCKIDSEG ARKVV
Subjt:  WAGLCKIDSEGKARKVV

Q9XHS0 40S ribosomal protein S121.7e-4480.56Show/hide
Query:  VAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGLCKIDS
        V    EAP P LGEPMD+ TALQLV++KS AH GLV+GL E+AK+IEKHAAQLCVL EDC+QPDYVKLVKALCAEHNV+L+TVPSAKTLGEWAGLCKID+
Subjt:  VAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGLCKIDS

Query:  EGKARKVV
        EGKARKVV
Subjt:  EGKARKVV

Arabidopsis top hitse value%identityAlignment
AT1G15930.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein2.2e-3970.94Show/hide
Query:  MSADEVAVVAEAP----APALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGE
        MS DE A V   P      A+ E MD+ TAL+L LRK+ A+GG+VRGLHE AK IEK  AQL VL EDCNQPDYVKLVKALCA+H V L+TVPSAKTLGE
Subjt:  MSADEVAVVAEAP----APALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGE

Query:  WAGLCKIDSEGKARKVV
        WAGLCKIDSEG ARKVV
Subjt:  WAGLCKIDSEGKARKVV

AT1G15930.2 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein2.2e-3970.94Show/hide
Query:  MSADEVAVVAEAP----APALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGE
        MS DE A V   P      A+ E MD+ TAL+L LRK+ A+GG+VRGLHE AK IEK  AQL VL EDCNQPDYVKLVKALCA+H V L+TVPSAKTLGE
Subjt:  MSADEVAVVAEAP----APALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGE

Query:  WAGLCKIDSEGKARKVV
        WAGLCKIDSEG ARKVV
Subjt:  WAGLCKIDSEGKARKVV

AT2G32060.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.2e-4070.09Show/hide
Query:  MSADEVAVVAEAP----APALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGE
        MS DE       P    A  + E MD+ TAL+L +RKS A+GG+VRGLHESAK IEK  AQLCVL EDCNQPDYVKLVKALCA+H++ L+TVPSAKTLGE
Subjt:  MSADEVAVVAEAP----APALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGE

Query:  WAGLCKIDSEGKARKVV
        WAGLCKIDSEG ARKVV
Subjt:  WAGLCKIDSEGKARKVV

AT2G32060.2 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.2e-4070.09Show/hide
Query:  MSADEVAVVAEAP----APALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGE
        MS DE       P    A  + E MD+ TAL+L +RKS A+GG+VRGLHESAK IEK  AQLCVL EDCNQPDYVKLVKALCA+H++ L+TVPSAKTLGE
Subjt:  MSADEVAVVAEAP----APALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGE

Query:  WAGLCKIDSEGKARKVV
        WAGLCKIDSEG ARKVV
Subjt:  WAGLCKIDSEGKARKVV

AT2G32060.3 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.2e-4070.09Show/hide
Query:  MSADEVAVVAEAP----APALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGE
        MS DE       P    A  + E MD+ TAL+L +RKS A+GG+VRGLHESAK IEK  AQLCVL EDCNQPDYVKLVKALCA+H++ L+TVPSAKTLGE
Subjt:  MSADEVAVVAEAP----APALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGE

Query:  WAGLCKIDSEGKARKVV
        WAGLCKIDSEG ARKVV
Subjt:  WAGLCKIDSEGKARKVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGCTGATGAAGTTGCTGTTGTGGCTGAGGCTCCAGCCCCAGCTCTAGGTGAGCCGATGGACATTGAGACTGCTCTGCAGCTTGTTCTTAGAAAATCATTGGCTCA
TGGTGGGCTTGTTCGAGGTCTTCACGAGAGTGCTAAAGCTATTGAGAAACATGCTGCTCAGCTCTGTGTCTTGGGAGAAGACTGCAACCAGCCAGATTATGTTAAACTTG
TCAAAGCTCTCTGTGCAGAGCACAACGTTAACTTGATGACAGTCCCAAGTGCGAAAACTCTTGGCGAGTGGGCTGGTCTATGCAAGATTGATTCCGAAGGAAAGGCAAGG
AAAGTTGTTGTTGCTCTTGTGTCGTAG
mRNA sequenceShow/hide mRNA sequence
CTCCCCTCCTTCTCTCAGTCCTGCCGCCGCCGCCATCTCTCGATCTCTGATTTTCTTGCAATAGCAAGGAGGTAGAACTTCTAAATCAAGAAGAAAAATGTCAGCTGATG
AAGTTGCTGTTGTGGCTGAGGCTCCAGCCCCAGCTCTAGGTGAGCCGATGGACATTGAGACTGCTCTGCAGCTTGTTCTTAGAAAATCATTGGCTCATGGTGGGCTTGTT
CGAGGTCTTCACGAGAGTGCTAAAGCTATTGAGAAACATGCTGCTCAGCTCTGTGTCTTGGGAGAAGACTGCAACCAGCCAGATTATGTTAAACTTGTCAAAGCTCTCTG
TGCAGAGCACAACGTTAACTTGATGACAGTCCCAAGTGCGAAAACTCTTGGCGAGTGGGCTGGTCTATGCAAGATTGATTCCGAAGGAAAGGCAAGGAAAGTTGTTGTTG
CTCTTGTGTCGTAGTTAAGGATTTTGGGGAAGACCACGAGGCGCTTCACATTGTCCAGAAGCATGTGAGTTCAAATTGATTACCGAAATGGTGTCTGTTGAGATTACAGT
TGTTGGTCTCATTTAGAAAGTTTTTGATCCTTAGTTATGTTTAGATTTGGTGCACTGTTGTTGCTTTAACACCTACCTTCACCCTATAATGTGTTTTTTCTTTGTCGATT
GATTGGAAAGACTAGTTTTTATCATCATCTGAGTCCATTGATGTGGAGCTCATTATCATTCCGGCCAACAGAACAATTTATTCACAAGAGTCTTCTTGCCCATGGGAAAA
GTGGAATTGATATTTATCATCTTTTTTTCCTGATTTCATCTCTAGATTTTATTCACTCCCGTTTTATATCTAATTTGGTTCAAAATGACAATTATACCCTCATTAGGAAA
TTGAAAGGATGAATTATTATCTGCTGTTGACAAGGCAATTTTTGAAAA
Protein sequenceShow/hide protein sequence
MSADEVAVVAEAPAPALGEPMDIETALQLVLRKSLAHGGLVRGLHESAKAIEKHAAQLCVLGEDCNQPDYVKLVKALCAEHNVNLMTVPSAKTLGEWAGLCKIDSEGKAR
KVVVALVS