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PI0010804 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010804
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCell wall protein RBR3-like
Genome locationchr02:19992046..19992807
RNA-Seq ExpressionPI0010804
SyntenyPI0010804
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056211.1 uncharacterized protein E6C27_scaffold85G00030 [Cucumis melo var. makuwa]1.4e-1944.7Show/hide
Query:  SSALCPSSNGAKTVHSSEGLVNSERVSPPTPSSIPHTSTAAFSPVKSPHPTPFKGQKV---ITTTTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQR
        SS++ PS +   T       +  E + PPT   I  +S      +KSP P   K Q+    +TT T R+K+P+NVP VPID +SFH E+SV  WK+V+Q+
Subjt:  SSALCPSSNGAKTVHSSEGLVNSERVSPPTPSSIPHTSTAAFSPVKSPHPTPFKGQKV---ITTTTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQR

Query:  RIANEVNISDQHHSCLPIIDLIVCAGMTKTVT
        RI +EVNISD+H SC+ I+DLI  AG+ KT++
Subjt:  RIANEVNISDQHHSCLPIIDLIVCAGMTKTVT

KAA0066044.1 uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa]6.9e-1948.18Show/hide
Query:  SERVSPPTPSSIPHTSTAAFSPVKSPHPTPFKGQKV---ITTTTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQRRIANEVNISDQHHSCLPIIDLI
        ++ V P  P   P   T        P P   KGQ++   ITT  GR+K+P N+P VPI+ +SFH E++V +WK+VVQRRIA+EVNISD+HHSC+ I++LI
Subjt:  SERVSPPTPSSIPHTSTAAFSPVKSPHPTPFKGQKV---ITTTTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQRRIANEVNISDQHHSCLPIIDLI

Query:  VCAGMTKTVT
          AG++KT++
Subjt:  VCAGMTKTVT

TYK27163.1 cell wall protein RBR3-like [Cucumis melo var. makuwa]2.5e-2143.75Show/hide
Query:  VISDSSNKDNVTIARLVRHPQGVSSSALCPSSNGAKTVHSSEGLVNSERVSPPTPSSIPHTSTAAFSPVKS-----PHPTPFKGQ---KVITTTTGRRKL
        V S S N +N++   LV   QG +SS + P S     V +SE   +   +    P+     S     PV       P     K     KVITT TG RK+
Subjt:  VISDSSNKDNVTIARLVRHPQGVSSSALCPSSNGAKTVHSSEGLVNSERVSPPTPSSIPHTSTAAFSPVKS-----PHPTPFKGQ---KVITTTTGRRKL

Query:  PSNVPIVPIDEVSFHCEDSVHKWKYVVQRRIANEVNISDQHHSCLPIIDLIVCAGMTKTV
        P N+P +PID +SFH E+SVH+WKYVVQRR A+EVNISD+HHSCL ++DL + AG++KT+
Subjt:  PSNVPIVPIDEVSFHCEDSVHKWKYVVQRRIANEVNISDQHHSCLPIIDLIVCAGMTKTV

XP_008454855.1 PREDICTED: uncharacterized protein LOC103495162 [Cucumis melo]4.0e-1940.48Show/hide
Query:  DSSNKDNVTIARLVRHPQGVSSSALCPSSNGAKTVHSSEGLVNSERVSPPTPS--SIPH-----------TSTAAFSPVKSPHPTPF--KGQKV---ITT
        DS + D+V +ARLV+  +  + +A+  + N       S+   +SE V  PTP    + H           +S    +P+ S  P P   KGQ++   ITT
Subjt:  DSSNKDNVTIARLVRHPQGVSSSALCPSSNGAKTVHSSEGLVNSERVSPPTPS--SIPH-----------TSTAAFSPVKSPHPTPF--KGQKV---ITT

Query:  TTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQRRIANEVNISDQHHSCLPIIDLIVCAGMTKTVT
          GR+K+P N+P VPID + FH E++V  WK+++QRRIA+EVNISD+HHSC+ II+LI  AG++KT++
Subjt:  TTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQRRIANEVNISDQHHSCLPIIDLIVCAGMTKTVT

XP_008465030.1 PREDICTED: uncharacterized protein LOC103502746 [Cucumis melo]1.4e-1944.7Show/hide
Query:  SSALCPSSNGAKTVHSSEGLVNSERVSPPTPSSIPHTSTAAFSPVKSPHPTPFKGQKV---ITTTTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQR
        SS++ PS +   T       +  E + PPT   I  +S      +KSP P   K Q+    +TT T R+K+P+NVP VPID +SFH E+SV  WK+V+Q+
Subjt:  SSALCPSSNGAKTVHSSEGLVNSERVSPPTPSSIPHTSTAAFSPVKSPHPTPFKGQKV---ITTTTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQR

Query:  RIANEVNISDQHHSCLPIIDLIVCAGMTKTVT
        RI +EVNISD+H SC+ I+DLI  AG+ KT++
Subjt:  RIANEVNISDQHHSCLPIIDLIVCAGMTKTVT

TrEMBL top hitse value%identityAlignment
A0A1S3BZ31 uncharacterized protein LOC1034951622.0e-1940.48Show/hide
Query:  DSSNKDNVTIARLVRHPQGVSSSALCPSSNGAKTVHSSEGLVNSERVSPPTPS--SIPH-----------TSTAAFSPVKSPHPTPF--KGQKV---ITT
        DS + D+V +ARLV+  +  + +A+  + N       S+   +SE V  PTP    + H           +S    +P+ S  P P   KGQ++   ITT
Subjt:  DSSNKDNVTIARLVRHPQGVSSSALCPSSNGAKTVHSSEGLVNSERVSPPTPS--SIPH-----------TSTAAFSPVKSPHPTPF--KGQKV---ITT

Query:  TTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQRRIANEVNISDQHHSCLPIIDLIVCAGMTKTVT
          GR+K+P N+P VPID + FH E++V  WK+++QRRIA+EVNISD+HHSC+ II+LI  AG++KT++
Subjt:  TTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQRRIANEVNISDQHHSCLPIIDLIVCAGMTKTVT

A0A1S3CMY0 uncharacterized protein LOC1035027466.7e-2044.7Show/hide
Query:  SSALCPSSNGAKTVHSSEGLVNSERVSPPTPSSIPHTSTAAFSPVKSPHPTPFKGQKV---ITTTTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQR
        SS++ PS +   T       +  E + PPT   I  +S      +KSP P   K Q+    +TT T R+K+P+NVP VPID +SFH E+SV  WK+V+Q+
Subjt:  SSALCPSSNGAKTVHSSEGLVNSERVSPPTPSSIPHTSTAAFSPVKSPHPTPFKGQKV---ITTTTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQR

Query:  RIANEVNISDQHHSCLPIIDLIVCAGMTKTVT
        RI +EVNISD+H SC+ I+DLI  AG+ KT++
Subjt:  RIANEVNISDQHHSCLPIIDLIVCAGMTKTVT

A0A5A7UQ31 Uncharacterized protein2.0e-1940.48Show/hide
Query:  DSSNKDNVTIARLVRHPQGVSSSALCPSSNGAKTVHSSEGLVNSERVSPPTPS--SIPH-----------TSTAAFSPVKSPHPTPF--KGQKV---ITT
        DS + D+V +ARLV+  +  + +A+  + N       S+   +SE V  PTP    + H           +S    +P+ S  P P   KGQ++   ITT
Subjt:  DSSNKDNVTIARLVRHPQGVSSSALCPSSNGAKTVHSSEGLVNSERVSPPTPS--SIPH-----------TSTAAFSPVKSPHPTPF--KGQKV---ITT

Query:  TTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQRRIANEVNISDQHHSCLPIIDLIVCAGMTKTVT
          GR+K+P N+P VPID + FH E++V  WK+++QRRIA+EVNISD+HHSC+ II+LI  AG++KT++
Subjt:  TTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQRRIANEVNISDQHHSCLPIIDLIVCAGMTKTVT

A0A5A7URQ6 Uncharacterized protein6.7e-2044.7Show/hide
Query:  SSALCPSSNGAKTVHSSEGLVNSERVSPPTPSSIPHTSTAAFSPVKSPHPTPFKGQKV---ITTTTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQR
        SS++ PS +   T       +  E + PPT   I  +S      +KSP P   K Q+    +TT T R+K+P+NVP VPID +SFH E+SV  WK+V+Q+
Subjt:  SSALCPSSNGAKTVHSSEGLVNSERVSPPTPSSIPHTSTAAFSPVKSPHPTPFKGQKV---ITTTTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQR

Query:  RIANEVNISDQHHSCLPIIDLIVCAGMTKTVT
        RI +EVNISD+H SC+ I+DLI  AG+ KT++
Subjt:  RIANEVNISDQHHSCLPIIDLIVCAGMTKTVT

A0A5D3DU39 Cell wall protein RBR3-like1.2e-2143.75Show/hide
Query:  VISDSSNKDNVTIARLVRHPQGVSSSALCPSSNGAKTVHSSEGLVNSERVSPPTPSSIPHTSTAAFSPVKS-----PHPTPFKGQ---KVITTTTGRRKL
        V S S N +N++   LV   QG +SS + P S     V +SE   +   +    P+     S     PV       P     K     KVITT TG RK+
Subjt:  VISDSSNKDNVTIARLVRHPQGVSSSALCPSSNGAKTVHSSEGLVNSERVSPPTPSSIPHTSTAAFSPVKS-----PHPTPFKGQ---KVITTTTGRRKL

Query:  PSNVPIVPIDEVSFHCEDSVHKWKYVVQRRIANEVNISDQHHSCLPIIDLIVCAGMTKTV
        P N+P +PID +SFH E+SVH+WKYVVQRR A+EVNISD+HHSCL ++DL + AG++KT+
Subjt:  PSNVPIVPIDEVSFHCEDSVHKWKYVVQRRIANEVNISDQHHSCLPIIDLIVCAGMTKTV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAAGATTGGTTCCGTGGTTGCACAGTTTCGACCCATCATACTTCGTCCATGGATGGTGCGCCTTATTTTGTTCTGGGTTCTGCTTCGCGCTTGTTTGAGGCTTCG
TTCCAGTGGCTTCAAGAATCAATCGGATGTTATATCTGATTCCTCTAATAAGGATAATGTGACTATTGCTCGGTTGGTGCGCCATCCCCAAGGGGTTTCCTCTTCTGCAC
TGTGTCCTTCGTCTAATGGTGCCAAGACTGTGCATTCTTCTGAAGGTCTTGTGAATTCTGAAAGGGTCTCTCCTCCTACTCCTTCCTCTATTCCTCATACATCAACTGCT
GCTTTTTCCCCAGTTAAGTCTCCTCATCCTACTCCATTCAAGGGTCAAAAGGTCATCACTACTACGACAGGACGTCGTAAACTACCTTCTAATGTGCCTATTGTTCCCAT
TGATGAGGTTTCATTTCACTGTGAAGATAGTGTTCACAAATGGAAGTATGTGGTTCAACGACGAATTGCTAATGAGGTGAATATTTCTGATCAACATCATTCTTGCTTGC
CCATCATAGATCTAATTGTGTGTGCTGGGATGACTAAGACTGTTACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCACAAGATTGGTTCCGTGGTTGCACAGTTTCGACCCATCATACTTCGTCCATGGATGGTGCGCCTTATTTTGTTCTGGGTTCTGCTTCGCGCTTGTTTGAGGCTTCG
TTCCAGTGGCTTCAAGAATCAATCGGATGTTATATCTGATTCCTCTAATAAGGATAATGTGACTATTGCTCGGTTGGTGCGCCATCCCCAAGGGGTTTCCTCTTCTGCAC
TGTGTCCTTCGTCTAATGGTGCCAAGACTGTGCATTCTTCTGAAGGTCTTGTGAATTCTGAAAGGGTCTCTCCTCCTACTCCTTCCTCTATTCCTCATACATCAACTGCT
GCTTTTTCCCCAGTTAAGTCTCCTCATCCTACTCCATTCAAGGGTCAAAAGGTCATCACTACTACGACAGGACGTCGTAAACTACCTTCTAATGTGCCTATTGTTCCCAT
TGATGAGGTTTCATTTCACTGTGAAGATAGTGTTCACAAATGGAAGTATGTGGTTCAACGACGAATTGCTAATGAGGTGAATATTTCTGATCAACATCATTCTTGCTTGC
CCATCATAGATCTAATTGTGTGTGCTGGGATGACTAAGACTGTTACTTAG
Protein sequenceShow/hide protein sequence
MHKIGSVVAQFRPIILRPWMVRLILFWVLLRACLRLRSSGFKNQSDVISDSSNKDNVTIARLVRHPQGVSSSALCPSSNGAKTVHSSEGLVNSERVSPPTPSSIPHTSTA
AFSPVKSPHPTPFKGQKVITTTTGRRKLPSNVPIVPIDEVSFHCEDSVHKWKYVVQRRIANEVNISDQHHSCLPIIDLIVCAGMTKTVT