; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0010820 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010820
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNuclear transcription factor Y subunit C
Genome locationchr01:2299711..2302073
RNA-Seq ExpressionPI0010820
SyntenyPI0010820
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136852.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus]2.1e-140100Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSD

XP_022157652.1 nuclear transcription factor Y subunit C-2 [Momordica charantia]1.0e-13496.24Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQL YSNPY+T  MVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSDA
        SPADLPYYYVP QHPV A GMIMGKQLDQANMYG TAQQPRP MPFMPWPHTQPQQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSDA

XP_022927856.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata]4.0e-13194.42Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHT---QPQQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQPRP +PFMPWPHT   Q QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHT---QPQQQQQTQQQSDA

XP_022988890.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima]1.4e-13194.8Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHT---QPQQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQPRP +PFMPWPHT   Q QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHT---QPQQQQQTQQQSDA

XP_038888434.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida]9.8e-13897.74Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQH QQSQQPAG VGAGQL YSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSDA
        SPADLPYYYVPSQHPVGATGMIMGKQLDQ NMYG TAQQPRPSMPFMPWPHTQPQQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSDA

TrEMBL top hitse value%identityAlignment
A0A0A0K5U1 Histone domain-containing protein1.0e-140100Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSD

A0A1S3C190 nuclear transcription factor Y subunit C-21.0e-140100Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSD

A0A5A7SLP2 Nuclear transcription factor Y subunit C-21.0e-140100Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSD

A0A6J1DV19 nuclear transcription factor Y subunit C-24.9e-13596.24Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQL YSNPY+T  MVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSDA
        SPADLPYYYVP QHPV A GMIMGKQLDQANMYG TAQQPRP MPFMPWPHTQPQQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSDA

A0A6J1JII4 nuclear transcription factor Y subunit C-2-like6.7e-13294.8Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGVGAGQL YSNPYQTAPM ASGTPAITIPPTQ PSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHT---QPQQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQQPRP +PFMPWPHT   Q QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHT---QPQQQQQTQQQSDA

SwissProt top hitse value%identityAlignment
Q655V5 Nuclear transcription factor Y subunit C-44.0e-6560.77Show/hide
Query:  QPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSP------HQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QPA GV AG  Q    Y+ A  V +  PA+    +QP  SF  +P      HQL YQQAQ FH Q QQQQQ+QLQ FWA ++ +IEQTTDFKNHSLPLAR
Subjt:  QPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSP------HQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVGSPAD-LPY
        IKKIMKADEDVRMISAEAPVIFAKACE+FILELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG+G+ +A LP +G PAD  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVGSPAD-LPY

Query:  -YYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQ-QTQQQSD
         YYVP Q   GA G+  G Q                  P   W   Q QQ++   +QQSD
Subjt:  -YYVPSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQ-QTQQQSD

Q8L4B2 Nuclear transcription factor Y subunit C-95.7e-5656.2Show/hide
Query:  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASLPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASLPVVGSPADLPY

Query:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQS
         Y+P+   P+G  GM+MG      N  GA      P  P+M  P  Q Q   Q  Q++
Subjt:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQS

Q8LCG7 Nuclear transcription factor Y subunit C-22.5e-6768.98Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD
        M+QSE  Q QQQ          G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTD
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD

Query:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLP-
        FKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK ++P 
Subjt:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLP-

Query:  VVGSPADLPYYYVPSQ
        VVGSP   PYYY+  Q
Subjt:  VVGSPADLPYYYVPSQ

Q9SMP0 Nuclear transcription factor Y subunit C-15.4e-5459.09Show/hide
Query:  AITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELT
        A  IPP  P ++ S +    +Y       H   QQQQQQLQ+FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT
Subjt:  AITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELT

Query:  LRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP
        +RSW+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E   +    + V  + + +PYYY P   P G  GM++G+     N  G   Q P
Subjt:  LRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQQP

Q9ZVL3 Nuclear transcription factor Y subunit C-32.0e-5354.84Show/hide
Query:  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIK
        QQ Q  A   G      SNPYQT  M            T P  S   + HQ+        H QQQQQ  QQLQ FW  Q +EIE+TTDFKNHSLPLARIK
Subjt:  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVGSPADLPYYYV
        KIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG   A      + A  PY Y+
Subjt:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVGSPADLPYYYV

Query:  -PSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQ
         P   P+G  GM+MG            A  P P M    W    P+QQ
Subjt:  -PSQHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQ

Arabidopsis top hitse value%identityAlignment
AT1G08970.1 nuclear factor Y, subunit C94.1e-5756.2Show/hide
Query:  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASLPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASLPVVGSPADLPY

Query:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQS
         Y+P+   P+G  GM+MG      N  GA      P  P+M  P  Q Q   Q  Q++
Subjt:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQS

AT1G08970.3 nuclear factor Y, subunit C94.1e-5756.2Show/hide
Query:  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASLPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASLPVVGSPADLPY

Query:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQS
         Y+P+   P+G  GM+MG      N  GA      P  P+M  P  Q Q   Q  Q++
Subjt:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQS

AT1G08970.4 nuclear factor Y, subunit C94.1e-5756.2Show/hide
Query:  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G +  G    +NPYQT PM    T A T+      +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASLPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASLPVVGSPADLPY

Query:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQS
         Y+P+   P+G  GM+MG      N  GA      P  P+M  P  Q Q   Q  Q++
Subjt:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQS

AT1G56170.1 nuclear factor Y, subunit C21.8e-6868.98Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD
        M+QSE  Q QQQ          G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTD
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD

Query:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLP-
        FKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK ++P 
Subjt:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLP-

Query:  VVGSPADLPYYYVPSQ
        VVGSP   PYYY+  Q
Subjt:  VVGSPADLPYYYVPSQ

AT1G56170.2 nuclear factor Y, subunit C21.8e-6868.98Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD
        M+QSE  Q QQQ          G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTD
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLQYSNP--YQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD

Query:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLP-
        FKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK ++P 
Subjt:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLP-

Query:  VVGSPADLPYYYVPSQ
        VVGSP   PYYY+  Q
Subjt:  VVGSPADLPYYYVPSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAGTCACAGCAGCCTGCAGGCGGTGTCGGTGCAGGCCAATTACAATATTCTAATCCTTACCAAACAGCTCCGATGGT
GGCTTCCGGAACTCCTGCTATTACGATTCCCCCAACTCAGCCACCATCCAGTTTCTCCAATTCTCCACACCAGCTTGCCTACCAGCAGGCTCAACACTTCCACCACCAGC
AACAGCAGCAGCAGCAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCATAGTCTCCCTCTTGCTCGAATCAAG
AAAATAATGAAAGCAGATGAAGACGTCCGAATGATTTCCGCTGAAGCACCAGTTATATTTGCAAAAGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGAT
TCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCAAGGACAGATGTCTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAAC
TGAAAGAGGAAGGTCTCGGAATCACAAAAGCCTCCCTTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTTCCATCCCAGCATCCAGTGGGAGCTACAGGA
ATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGCCACTGCACAACAGCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATACCCAACCTCAGCAGCA
GCAACAAACTCAGCAGCAAAGTGATGCATAG
mRNA sequenceShow/hide mRNA sequence
CTCACACCTCGACACGTTTCTCTTTTATACCATTCCTCCTTCTTTCTCTCTCAAACACCTTCCTTCAACTCTCTCTCTCTCTTGATCCCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTTAGGGTTTCTGCTCTGCTTACTGATGAGTTTTGCTGCTCTTCTCTTTCTGCTTTGTTAATCAGAGTGTGGAAAATACACCAAGTATCGTGAGCAATGG
ATCAATCAGAGCGTTCTCAGCATCAGCAACAGTCACAGCAGCCTGCAGGCGGTGTCGGTGCAGGCCAATTACAATATTCTAATCCTTACCAAACAGCTCCGATGGTGGCT
TCCGGAACTCCTGCTATTACGATTCCCCCAACTCAGCCACCATCCAGTTTCTCCAATTCTCCACACCAGCTTGCCTACCAGCAGGCTCAACACTTCCACCACCAGCAACA
GCAGCAGCAGCAACAACAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTTAAGAACCATAGTCTCCCTCTTGCTCGAATCAAGAAAA
TAATGAAAGCAGATGAAGACGTCCGAATGATTTCCGCTGAAGCACCAGTTATATTTGCAAAAGCATGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGATTCAT
ACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAACGATATTGCAGCTGCAATTTCAAGGACAGATGTCTTTGATTTCTTGGTTGATATTATTCCAAGAGATGAACTGAA
AGAGGAAGGTCTCGGAATCACAAAAGCCTCCCTTCCCGTAGTTGGTTCCCCAGCTGATCTTCCTTATTACTATGTTCCATCCCAGCATCCAGTGGGAGCTACAGGAATGA
TCATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGCCACTGCACAACAGCCCCGACCATCGATGCCTTTCATGCCATGGCCGCATACCCAACCTCAGCAGCAGCAA
CAAACTCAGCAGCAAAGTGATGCATAGGTATAAGTAGTAGGCGGTTTCGAAACCGTCATGATATGATTTGATAGAGGCGATACTGAGTGACTTTGAATGTGTCTACTGTC
TAGTTTAGTTCATAAAAGAATAGCTCTTGTAGAGAACTTGTCAATGATGACAAGTTGGAGTTGAGTTTGTATGATGAGAGGGTGTGTTTATCTCTTATTACTCTTAATTA
TCTATTACTGTAATGTACAACAGTGTATGTGGAAGAGGTTCCAACTTTGCCCAAAAAAAGCTATAATTTCAATTT
Protein sequenceShow/hide protein sequence
MDQSERSQHQQQSQQPAGGVGAGQLQYSNPYQTAPMVASGTPAITIPPTQPPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIK
KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASLPVVGSPADLPYYYVPSQHPVGATG
MIMGKQLDQANMYGATAQQPRPSMPFMPWPHTQPQQQQQTQQQSDA