; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0010825 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010825
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionprotein indeterminate-domain 16
Genome locationchr02:24943759..24944463
RNA-Seq ExpressionPI0010825
SyntenyPI0010825
Gene Ontology termsGO:0009630 - gravitropism (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR039288 - Zinc finger protein SHOOT GRAVITROPISM 5-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057771.1 protein indeterminate-domain 16 [Cucumis melo var. makuwa]2.0e-7594.58Show/hide
Query:  RKSYSFFHTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY
        +K      TPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA+EKAY
Subjt:  RKSYSFFHTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY

Query:  AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

KAE8652381.1 hypothetical protein Csa_014379 [Cucumis sativus]7.5e-6792.12Show/hide
Query:  RKSYSFFHTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTA-GAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAM
        +K      TPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISLRPIRPVTA GAECLFKYEEVMKPEAASCV+ALKWQAAEQIRLAAM
Subjt:  RKSYSFFHTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTA-GAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAM

Query:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
        EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ
Subjt:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQ

XP_004138047.1 protein indeterminate-domain 16 [Cucumis sativus]5.6e-7092.35Show/hide
Query:  RKSYSFFHTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTA-GAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAM
        +K      TPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISLRPIRPVTA GAECLFKYEEVMKPEAASCV+ALKWQAAEQIRLAAM
Subjt:  RKSYSFFHTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTA-GAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAM

Query:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

XP_008464429.1 PREDICTED: protein indeterminate-domain 16 [Cucumis melo]6.8e-7695.18Show/hide
Query:  RKSYSFFHTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY
        +K      TPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY
Subjt:  RKSYSFFHTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY

Query:  AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

XP_038878928.1 protein indeterminate-domain 16 [Benincasa hispida]1.6e-6990.96Show/hide
Query:  RKSYSFFHTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY
        +K      TPHSIASSSSHMSSRPSDSSLRFRSD FEA   GSVDLQLSISLRPIRP    AECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY
Subjt:  RKSYSFFHTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY

Query:  AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

TrEMBL top hitse value%identityAlignment
A0A0A0LRS8 Uncharacterized protein2.7e-7092.35Show/hide
Query:  RKSYSFFHTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTA-GAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAM
        +K      TPHSIASSS SH+SSRPSD SSLRFRSDP FEAGSGGSVDLQLSISLRPIRPVTA GAECLFKYEEVMKPEAASCV+ALKWQAAEQIRLAAM
Subjt:  RKSYSFFHTPHSIASSS-SHMSSRPSD-SSLRFRSDP-FEAGSGGSVDLQLSISLRPIRPVTA-GAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAM

Query:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  EKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A1S3CN02 protein indeterminate-domain 163.3e-7695.18Show/hide
Query:  RKSYSFFHTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY
        +K      TPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY
Subjt:  RKSYSFFHTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY

Query:  AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A5A7UWD1 Protein indeterminate-domain 169.6e-7694.58Show/hide
Query:  RKSYSFFHTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY
        +K      TPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAA+EKAY
Subjt:  RKSYSFFHTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY

Query:  AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A5D3BFD1 Protein indeterminate-domain 163.3e-7695.18Show/hide
Query:  RKSYSFFHTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY
        +K      TPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAG ECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY
Subjt:  RKSYSFFHTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAY

Query:  AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
Subjt:  AERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

A0A6J1E4S8 protein indeterminate-domain 16-like2.2e-6485.71Show/hide
Query:  RKSYSFFHTPHSIA--SSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEK
        +K      TPH+IA  SSSSHMSSRPS SS+RFRSDP+EAG  GS+DLQLSIS+RPIRP    AEC+FKYEEVMKPEAASCVEALKWQAAEQIRLAAMEK
Subjt:  RKSYSFFHTPHSIA--SSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEK

Query:  AYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS
        AYAERVRELTKREIELAQTEF RARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR S
Subjt:  AYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS

SwissProt top hitse value%identityAlignment
F4IPE3 Zinc finger protein SHOOT GRAVITROPISM 51.3e-0841.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

Q9C9X7 Protein indeterminate-domain 141.6e-0644.44Show/hide
Query:  ERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        E  R  TKR+IE+A+ EFA A+++ + AR E+ KA   +E A+R++ +T M+ITC +C+Q F+
Subjt:  ERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

Q9FRH4 Protein indeterminate-domain 165.3e-0732.39Show/hide
Query:  RPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARA
        RPS+      + PF A S     L+L +S+   R  +A A    K E  +  E A+                  E   AE  R+  KR+IE+A+ +F +A
Subjt:  RPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARA

Query:  RQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        +++ E A+ E+EKA  ++E A +++++T MEITC SC+Q F+
Subjt:  RQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

Arabidopsis top hitse value%identityAlignment
AT1G25250.1 indeterminate(ID)-domain 163.8e-0832.39Show/hide
Query:  RPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARA
        RPS+      + PF A S     L+L +S+   R  +A A    K E  +  E A+                  E   AE  R+  KR+IE+A+ +F +A
Subjt:  RPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARA

Query:  RQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        +++ E A+ E+EKA  ++E A +++++T MEITC SC+Q F+
Subjt:  RQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.1 C2H2-like zinc finger protein9.0e-1041.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.2 C2H2-like zinc finger protein9.0e-1041.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT2G01940.3 C2H2-like zinc finger protein9.0e-1041.77Show/hide
Query:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR
        A+EQI ++A  EKAYAE  +   KR+ E+A+ EFA A+++ ++A+ E+E+A+ +KE++ +++ ST M++TCQ+C+ +F+
Subjt:  AAEQI-RLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFR

AT3G48550.1 BEST Arabidopsis thaliana protein match is: C2H2-like zinc finger protein (TAIR:AT2G01940.3)3.2e-3163.93Show/hide
Query:  VDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERA
        +DL+LSISL  I             EE+  P     VEALKWQAAEQIRLAA+EKAYAERVRELT+RE+E+AQ+EFARAR MW++AREEVE+AER+KER+
Subjt:  VDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVRELTKREIELAQTEFARARQMWERAREEVEKAERMKERA

Query:  TRQMDSTCMEITCQSCRQRFRP
          ++D+ C+EITC SCRQRFRP
Subjt:  TRQMDSTCMEITCQSCRQRFRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATCAGAAAGAGTTACAGCTTCTTCCACACACCTCACTCCATAGCATCCTCATCATCCCACATGTCGTCCCGTCCATCAGACTCCTCGTTACGGTTCCGTTCCGA
TCCATTTGAAGCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGCCTGAGGCCAATCCGGCCAGTGACGGCAGGGGCGGAGTGCTTGTTCAAGTACGAGGAGG
TGATGAAGCCGGAGGCAGCGAGCTGCGTAGAGGCGCTGAAGTGGCAAGCAGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGAGAACTG
ACAAAGAGAGAAATAGAATTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAAAAAGCTGAAAGAATGAAAGAAAGAGCAAC
TCGTCAAATGGATTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGGTTTCGGCCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATTGTACTCAAAGAAAAAAGAGAAAAGAAAAAAGAAAAAAAGAAGAGAAAAAAAAAGGAAAACCAATCTCCCTTTTTATTTGTATCTTCAGAAATGGAAGATGAAGATCA
GAAAGAGTTACAGCTTCTTCCACACACCTCACTCCATAGCATCCTCATCATCCCACATGTCGTCCCGTCCATCAGACTCCTCGTTACGGTTCCGTTCCGATCCATTTGAA
GCAGGATCAGGAGGATCGGTGGACCTACAGCTATCAATAAGCCTGAGGCCAATCCGGCCAGTGACGGCAGGGGCGGAGTGCTTGTTCAAGTACGAGGAGGTGATGAAGCC
GGAGGCAGCGAGCTGCGTAGAGGCGCTGAAGTGGCAAGCAGCGGAGCAAATTCGGCTGGCGGCGATGGAAAAGGCGTATGCTGAGAGAGTTAGAGAACTGACAAAGAGAG
AAATAGAATTGGCTCAAACGGAATTTGCTAGGGCAAGGCAGATGTGGGAAAGAGCAAGAGAAGAAGTTGAAAAAGCTGAAAGAATGAAAGAAAGAGCAACTCGTCAAATG
GATTCTACGTGCATGGAGATCACTTGCCAATCTTGCAGGCAGAGGTTTCGGCCTTCTTAATTATTATCTCTAATCATAATTTTACCTCATTAATTACCCCTTTCCATTTC
CCTAAATTATCCAGAGTTTCTTTTAATTAAATCTCTGCTTGGGTC
Protein sequenceShow/hide protein sequence
MKIRKSYSFFHTPHSIASSSSHMSSRPSDSSLRFRSDPFEAGSGGSVDLQLSISLRPIRPVTAGAECLFKYEEVMKPEAASCVEALKWQAAEQIRLAAMEKAYAERVREL
TKREIELAQTEFARARQMWERAREEVEKAERMKERATRQMDSTCMEITCQSCRQRFRPS