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PI0010827 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010827
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr01:9112098..9112366
RNA-Seq ExpressionPI0010827
SyntenyPI0010827
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033661.1 hypothetical protein E6C27_scaffold239G001280 [Cucumis melo var. makuwa]1.5e-2486.36Show/hide
Query:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH
        YWPELSFTE+RPNA+LL+ PGRPRTTRI NEMDWKESGQS+RCTICK EGHNR TCPQRA SSSRH
Subjt:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH

KAA0044308.1 uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa]5.1e-2587.88Show/hide
Query:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH
        YWPELSFTEVRPNA+LL+ PGRPRTTRI NEMDWKESGQS+RCTICK EGHNR TCPQRA SSSRH
Subjt:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH

KGN51592.1 hypothetical protein Csa_008873 [Cucumis sativus]1.3e-2581.94Show/hide
Query:  MTATYYYWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH
        M AT+YYW E+SFTEVRPNA+LL+EPGRPRTTRIQNEMDWKES QS+RCT+ K EGHNR TCPQRA SSSRH
Subjt:  MTATYYYWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH

TYK02543.1 uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa]5.1e-2587.88Show/hide
Query:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH
        YWPELSFTEVRPNA+LL+ PGRPRTTRI NEMDWKESGQS+RCTICK EGHNR TCPQRA SSSRH
Subjt:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH

XP_031737534.1 uncharacterized protein LOC116402427 [Cucumis sativus]6.0e-2686.15Show/hide
Query:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRASSSRH
        YWPE+SFTEVRPNA+LL+ PGRPRTTRIQNEMDWKES QS+RCTICK EGHNR TCP+RASSSRH
Subjt:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRASSSRH

TrEMBL top hitse value%identityAlignment
A0A0A0KT57 Uncharacterized protein6.5e-2681.94Show/hide
Query:  MTATYYYWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH
        M AT+YYW E+SFTEVRPNA+LL+EPGRPRTTRIQNEMDWKES QS+RCT+ K EGHNR TCPQRA SSSRH
Subjt:  MTATYYYWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH

A0A5A7SW50 SWIM-type domain-containing protein7.2e-2586.36Show/hide
Query:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH
        YWPELSFTE+RPNA+LL+ PGRPRTTRI NEMDWKESGQS+RCTICK EGHNR TCPQRA SSSRH
Subjt:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH

A0A5A7TN56 SWIM-type domain-containing protein2.5e-2587.88Show/hide
Query:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH
        YWPELSFTEVRPNA+LL+ PGRPRTTRI NEMDWKESGQS+RCTICK EGHNR TCPQRA SSSRH
Subjt:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH

A0A5A7VDU8 SWIM-type domain-containing protein2.1e-2486.36Show/hide
Query:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH
        YWPELSFTEVRPNANLL+ P RPRTTRI NEMDWKESGQS+RCTICK EGHNR  CPQRA SSSRH
Subjt:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH

A0A5D3BS92 SWIM-type domain-containing protein2.5e-2587.88Show/hide
Query:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH
        YWPELSFTEVRPNA+LL+ PGRPRTTRI NEMDWKESGQS+RCTICK EGHNR TCPQRA SSSRH
Subjt:  YWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRA-SSSRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCTACTTATTACTACTGGCCAGAGTTATCATTCACTGAAGTTCGCCCAAATGCGAACTTACTTAGAGAACCCGGTCGACCCAGAACTACGAGGATCCAGAATGA
AATGGATTGGAAGGAGTCCGGTCAATCAGTAAGATGCACGATATGTAAAGCGGAAGGACACAACAGACATACTTGTCCTCAACGTGCATCTTCTTCAAGACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGCTACTTATTACTACTGGCCAGAGTTATCATTCACTGAAGTTCGCCCAAATGCGAACTTACTTAGAGAACCCGGTCGACCCAGAACTACGAGGATCCAGAATGA
AATGGATTGGAAGGAGTCCGGTCAATCAGTAAGATGCACGATATGTAAAGCGGAAGGACACAACAGACATACTTGTCCTCAACGTGCATCTTCTTCAAGACATTGA
Protein sequenceShow/hide protein sequence
MTATYYYWPELSFTEVRPNANLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRHTCPQRASSSRH