CuGenDBv2

Gene ID	PI0010851
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	synaptotagmin-2-like
Genome location	chr05:14500676..14502555
RNA-Seq Expression	PI0010851
Synteny	PI0010851
Gene Ontology terms	GO:0006869 - lipid transport (biological process) GO:0006979 - response to oxidative stress (biological process) GO:0098869 - cellular oxidant detoxification (biological process) GO:0005777 - peroxisome (cellular component) GO:0012505 - endomembrane system (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0008289 - lipid binding (molecular function) GO:0016688 - L-ascorbate peroxidase activity (molecular function) GO:0020037 - heme binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR045050 - Synaptotagmin, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAA8528765.1 hypothetical protein F0562_036120 [Nyssa sinensis]

8.1e-16

82.14

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        ++P VDFGLKLLGA AMSI  LYRFVQELIKDQVANMYLW KTLEVPIMDPAK ++
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

KAF5943134.1 hypothetical protein HYC85_020776 [Camellia sinensis]

8.1e-16

82.14

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        ++P VDFGLKLLGA AMSI  LYRFVQELIKDQVANMYLW KTLEVPIMDPAK ++
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

THG15796.1 hypothetical protein TEA_023656 [Camellia sinensis var. sinensis]

4.7e-16

85.45

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Query:  QPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        QP VDFGLKLLGA AMSI  LYRFVQELIKDQVANMYLW KTLEVPIMDPAK ++
Subjt:  QPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

XP_028072961.1 synaptotagmin-2-like isoform X1 [Camellia sinensis]

8.1e-16

82.14

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        ++P VDFGLKLLGA AMSI  LYRFVQELIKDQVANMYLW KTLEVPIMDPAK ++
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

XP_028072967.1 synaptotagmin-2-like isoform X2 [Camellia sinensis]

8.1e-16

82.14

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        ++P VDFGLKLLGA AMSI  LYRFVQELIKDQVANMYLW KTLEVPIMDPAK ++
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

TrEMBL top hits

e value

%identity

Alignment

A0A4S4EIS7 Uncharacterized protein

2.3e-16

85.45

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Query:  QPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        QP VDFGLKLLGA AMSI  LYRFVQELIKDQVANMYLW KTLEVPIMDPAK ++
Subjt:  QPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

A0A5B6YHH5 Putative synaptotagmin-2

3.9e-16

82.14

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        ++P VDFGLKLLGA AMSI  LYRFVQELIKDQVANMYLW KTLEVPIMDPAK ++
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

A0A5B6YHQ5 Putative synaptotagmin-2

3.9e-16

82.14

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        ++P VDFGLKLLGA AMSI  LYRFVQELIKDQVANMYLW KTLEVPIMDPAK ++
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

A0A5J5ACN6 Uncharacterized protein

3.9e-16

82.14

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        ++P VDFGLKLLGA AMSI  LYRFVQELIKDQVANMYLW KTLEVPIMDPAK ++
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

A0A7J7GUL2 Uncharacterized protein

3.9e-16

82.14

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        ++P VDFGLKLLGA AMSI  LYRFVQELIKDQVANMYLW KTLEVPIMDPAK ++
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

SwissProt top hits

e value

%identity

Alignment

B6ETT4 Synaptotagmin-2

2.2e-16

73.21

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        D+P VDFGLKLLGA  M+I  LYRFVQE+IKDQVANMYLW KTL V IMDP+K ++
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

Q7XA06 Synaptotagmin-3

4.0e-10

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMD
        ++P VDFGLK+LG   MSI  LYR+VQE IK QV++MY W + LE+PI+D
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMD

Q9SKR2 Synaptotagmin-1

1.9e-15

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        ++P VDFGLKL GA  MSI  LYRFVQE IKDQVANMYLW KTL VPI+DPAK  R
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

Arabidopsis top hits

e value

%identity

Alignment

AT1G20080.1 Calcium-dependent lipid-binding (CaLB domain) family protein

1.6e-17

73.21

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        D+P VDFGLKLLGA  M+I  LYRFVQE+IKDQVANMYLW KTL V IMDP+K ++
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

AT2G20990.1 synaptotagmin A

1.3e-16

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        ++P VDFGLKL GA  MSI  LYRFVQE IKDQVANMYLW KTL VPI+DPAK  R
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

AT2G20990.2 synaptotagmin A

1.3e-16

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR
        ++P VDFGLKL GA  MSI  LYRFVQE IKDQVANMYLW KTL VPI+DPAK  R
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVR

AT2G20990.3 synaptotagmin A

6.4e-11

44.68

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQ--------------------------------------ELIKDQVANMYLWAKTLEVPIMDPAKYVR
        ++P VDFGLKL GA  MSI  LYRFVQ                                      E IKDQVANMYLW KTL VPI+DPAK  R
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQ--------------------------------------ELIKDQVANMYLWAKTLEVPIMDPAKYVR

AT5G04220.2 Calcium-dependent lipid-binding (CaLB domain) family protein

2.9e-11

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Query:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMD
        ++P VDFGLK+LG   MSI  LYR+VQE IK QV++MY W + LE+PI+D
Subjt:  DQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMD

Sequences

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CDS sequence

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ATGGGAAGGCAATACCACTTGTTAAGAGGTCTTCTCATAATTCAGCTGAAAAATGAGATGCCTTGTTATACAGGCATGGGATTGAAGGAGACTCTCAGGCTTGGAGTGAT
TGTTGGAAAGACTGAAAGCACTTCGTCTAGAATGAGAGCTGATCAACCCGATGTTGATTTTGGATTGAAATTGCTCGGTGCATATGCAATGTCCATCGCAAGGCTATATA
GGTTTGTTCAGGAACTAATAAAAGATCAAGTTGCCAATATGTATCTATGGGCCAAGACCCTTGAAGTACCGATAATGGACCCTGCGAAGTATGTGAGATTCATCAATGCC
AGCTATGAAAGTGTTGGAGGCAGTTTCAGTTCAGGAAATAATATGTTTGGGAATGGTCATGATGTGTAA

mRNA sequence

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Protein sequence

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MGRQYHLLRGLLIIQLKNEMPCYTGMGLKETLRLGVIVGKTESTSSRMRADQPDVDFGLKLLGAYAMSIARLYRFVQELIKDQVANMYLWAKTLEVPIMDPAKYVRFINA
SYESVGGSFSSGNNMFGNGHDV

PI0010851 (gene) of Melon (PI 482460) v1 genome