; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0010861 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010861
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr04:27102194..27103628
RNA-Seq ExpressionPI0010861
SyntenyPI0010861
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33993.1 retrotransposon gag protein [Cucumis melo subsp. melo]5.1e-5675.18Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQG  +KV KCGVC LVGHPNDKCP+++E+ N++RKYDP+ NTYN GWRDN NLRWGNDNQ+ +QA  +S+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
         EMKQQM+ LT AISK++GKGKLP QPD+ANVS ISLRSGK
Subjt:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]5.1e-5675.89Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQG   KV KCGVCGLVGHPNDKC  ++E+ N++R+YDPHSNTYN GWRDN NLRWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
         EMKQQM+ LT AISK++GKGKLP QPD+ANVS ISLRSGK
Subjt:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.4e-5878.01Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQG   KV KCGVCGLVGHPNDKCP ++E+ N++R+YDPHSNTYN GWRDNLNLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
         +MKQQM+ LT AISK++GKGKLP QPDHANVS ISLRSGK
Subjt:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
TYK10613.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.7e-5675.18Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQG   KV KCGVCGLVGHPNDKCP+++E+ N++R+YDPH NTYN+GWRD  NLRWGND Q  +QA S+S+NQGTNLED++KAL TNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
         EMKQQM+ LT AISK++GKGKLP QPDHANVS ISLRSGK
Subjt:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
XP_008465649.1 PREDICTED: uncharacterized protein LOC103503291, partial [Cucumis melo]3.9e-5673.76Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQG ++KV KCGVCGLVG+PNDKCP ++E+ N++R+YDPH NTYN+GWRDN NLRWGNDNQ+ +QA  +S+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
         +MKQQM+ LT  ISK++GKGKLP QPDH NVS ISLRSGK
Subjt:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
TrEMBL top hitse value%identityAlignment
A0A1S3CQU8 uncharacterized protein LOC1035032911.9e-5673.76Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQG ++KV KCGVCGLVG+PNDKCP ++E+ N++R+YDPH NTYN+GWRDN NLRWGNDNQ+ +QA  +S+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
         +MKQQM+ LT  ISK++GKGKLP QPDH NVS ISLRSGK
Subjt:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
A0A5A7V0Q7 Retrotransposon gag protein2.5e-5675.89Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQG   KV KCGVCGLVGHPNDKC  ++E+ N++R+YDPHSNTYN GWRDN NLRWGNDNQ+ +QA S+S+NQGTNLED++KAL TNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
         EMKQQM+ LT AISK++GKGKLP QPD+ANVS ISLRSGK
Subjt:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
A0A5D3CB46 Retrotransposon gag protein6.9e-5978.01Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQG   KV KCGVCGLVGHPNDKCP ++E+ N++R+YDPHSNTYN GWRDNLNLRWGNDNQ+ +QA S+S+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
         +MKQQM+ LT AISK++GKGKLP QPDHANVS ISLRSGK
Subjt:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
A0A5D3CFE7 Retrotransposon gag protein8.4e-5775.18Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQG   KV KCGVCGLVGHPNDKCP+++E+ N++R+YDPH NTYN+GWRD  NLRWGND Q  +QA S+S+NQGTNLED++KAL TNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
         EMKQQM+ LT AISK++GKGKLP QPDHANVS ISLRSGK
Subjt:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
E5GBZ4 Retrotransposon gag protein2.5e-5675.18Show/hide
Query:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ
        MTTLLTSFVQG  +KV KCGVC LVGHPNDKCP+++E+ N++RKYDP+ NTYN GWRDN NLRWGNDNQ+ +QA  +S+NQGTNLED++KALATNT+SFQ
Subjt:  MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQ

Query:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
         EMKQQM+ LT AISK++GKGKLP QPD+ANVS ISLRSGK
Subjt:  NEMKQQMSHLTNAISKLEGKGKLPVQPDHANVSTISLRSGK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACTTTATTAACTTCCTTTGTGCAAGGTGGATCTGTGAAAGTTGCTAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTGACTTAGTGGA
AGAAGCAAATGTCATTAGGAAGTACGATCCTCATAGCAATACTTACAATGTCGGTTGGAGAGACAACCTTAATCTAAGGTGGGGAAACGACAACCAAAGACCCTCACAAG
CAACTTCCTCTTCAAACAATCAAGGTACGAATTTAGAAGATCTAGTTAAAGCTCTTGCTACTAACACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTT
ACAAATGCGATTAGCAAGCTAGAAGGTAAAGGCAAACTTCCCGTTCAGCCAGATCATGCTAACGTAAGTACCATCTCACTTAGAAGCGGAAAAAGGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTACTTTATTAACTTCCTTTGTGCAAGGTGGATCTGTGAAAGTTGCTAAGTGCGGGGTGTGCGGTCTAGTCGGACATCCTAATGACAAGTGCCCTGACTTAGTGGA
AGAAGCAAATGTCATTAGGAAGTACGATCCTCATAGCAATACTTACAATGTCGGTTGGAGAGACAACCTTAATCTAAGGTGGGGAAACGACAACCAAAGACCCTCACAAG
CAACTTCCTCTTCAAACAATCAAGGTACGAATTTAGAAGATCTAGTTAAAGCTCTTGCTACTAACACCATCTCTTTTCAAAATGAAATGAAGCAACAAATGTCTCATCTT
ACAAATGCGATTAGCAAGCTAGAAGGTAAAGGCAAACTTCCCGTTCAGCCAGATCATGCTAACGTAAGTACCATCTCACTTAGAAGCGGAAAAAGGGATTGA
Protein sequenceShow/hide protein sequence
MTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNVGWRDNLNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATNTISFQNEMKQQMSHL
TNAISKLEGKGKLPVQPDHANVSTISLRSGKRD