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PI0010862 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010862
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr10:14348187..14348681
RNA-Seq ExpressionPI0010862
SyntenyPI0010862
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025354.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.9e-3976.36Show/hide
Query:  MPPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAES
        MPPFEV KNIWEQ+SKPPKCGI+IKENP I+EH S SE S+EE   PNIMSVMV DVDTSED+M ELEKK+N+LMK +EER++EIA  KNHIESRDAAES
Subjt:  MPPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAES

Query:  SHTHTVKNTD
        SHTHT+KN +
Subjt:  SHTHTVKNTD

KAA0039052.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.8e-3978.18Show/hide
Query:  MPPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAES
        MPPF+V KNIWEQ SKPPK GI+IKENPVI+EH SSSE S+EET HPNIMSV+  DVDTS+++MTELEKKINMLMK +EER+YEIAS KNHIESRDAAES
Subjt:  MPPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAES

Query:  SHTHTVKNTD
        SHTHT  N +
Subjt:  SHTHTVKNTD

KAA0041883.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]2.4e-4181.65Show/hide
Query:  PPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAESS
        PPFEV KNIWEQ+SKPPK GI+IKENP I+EH S SEHSSEE +HPNIMSVMV DVDTSE++M ELEKK+NMLMK +EER+YEIAS KNHIESRDAAESS
Subjt:  PPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAESS

Query:  HTHTVKNTD
        H HTVKNTD
Subjt:  HTHTVKNTD

KAA0065303.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.9e-3979.09Show/hide
Query:  MPPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAES
        MPPFEV KNIWEQ+SKPPK GI+IKEN  I+EH SSS+ SSEE  HPNIMSVMVA+VDTSE++M ELEKK+NMLMK +EER+YEIA  KNHIESRDAAES
Subjt:  MPPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAES

Query:  SHTHTVKNTD
        SH HTVKNTD
Subjt:  SHTHTVKNTD

TYK09793.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.9e-3978.9Show/hide
Query:  PPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAESS
        PPFEV KNIWEQ+SKPPK GI+IKENP I+EH SSS+ SSEE  HPNIMSVMV +VDTSE++MTELEKK+NMLMK +EER+YEIA  KNHIES DAAESS
Subjt:  PPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAESS

Query:  HTHTVKNTD
        H HTVKNTD
Subjt:  HTHTVKNTD

TrEMBL top hitse value%identityAlignment
A0A5A7SI89 Ty3-gypsy retrotransposon protein1.4e-3976.36Show/hide
Query:  MPPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAES
        MPPFEV KNIWEQ+SKPPKCGI+IKENP I+EH S SE S+EE   PNIMSVMV DVDTSED+M ELEKK+N+LMK +EER++EIA  KNHIESRDAAES
Subjt:  MPPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAES

Query:  SHTHTVKNTD
        SHTHT+KN +
Subjt:  SHTHTVKNTD

A0A5A7T6D4 Ty3-gypsy retrotransposon protein1.8e-3978.18Show/hide
Query:  MPPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAES
        MPPF+V KNIWEQ SKPPK GI+IKENPVI+EH SSSE S+EET HPNIMSV+  DVDTS+++MTELEKKINMLMK +EER+YEIAS KNHIESRDAAES
Subjt:  MPPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAES

Query:  SHTHTVKNTD
        SHTHT  N +
Subjt:  SHTHTVKNTD

A0A5A7VAV4 Retrotransposon gag protein2.4e-3979.09Show/hide
Query:  MPPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAES
        MPPFEV KNIWEQ+SKPPK GI+IKEN  I+EH SSS+ SSEE  HPNIMSVMVA+VDTSE++M ELEKK+NMLMK +EER+YEIA  KNHIESRDAAES
Subjt:  MPPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAES

Query:  SHTHTVKNTD
        SH HTVKNTD
Subjt:  SHTHTVKNTD

A0A5D3C4W1 Ty3-gypsy retrotransposon protein1.1e-4181.65Show/hide
Query:  PPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAESS
        PPFEV KNIWEQ+SKPPK GI+IKENP I+EH S SEHSSEE +HPNIMSVMV DVDTSE++M ELEKK+NMLMK +EER+YEIAS KNHIESRDAAESS
Subjt:  PPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAESS

Query:  HTHTVKNTD
        H HTVKNTD
Subjt:  HTHTVKNTD

A0A5D3CD55 Ty3-gypsy retrotransposon protein2.4e-3978.9Show/hide
Query:  PPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAESS
        PPFEV KNIWEQ+SKPPK GI+IKENP I+EH SSS+ SSEE  HPNIMSVMV +VDTSE++MTELEKK+NMLMK +EER+YEIA  KNHIES DAAESS
Subjt:  PPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAESS

Query:  HTHTVKNTD
        H HTVKNTD
Subjt:  HTHTVKNTD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACCCTTTGAGGTTGTAAAGAATATTTGGGAACAACTGTCAAAACCACCAAAATGTGGAATTATAATCAAAGAAAATCCTGTAATCAACGAACACATTTCGTCCTC
TGAACACTCAAGTGAGGAGACGTCACACCCAAATATAATGTCAGTTATGGTGGCTGACGTGGATACAAGTGAAGACAAAATGACAGAGCTTGAAAAGAAGATTAACATGC
TCATGAAGACAATTGAAGAAAGGAATTATGAGATTGCATCTTTCAAGAATCACATCGAGAGTCGTGACGCTGCTGAATCAAGTCATACACATACTGTCAAGAATACTGAC
CTGGAAGGCAATTATGCAATAAAGTCAACCACAACATTTGACCTCAATTGCATTGTTGTCTGTTCAGTAGTTGTAGGAGATGATAGCAAACTCCACCAAAACTCAACGTT
GTCTATCATATCCAACCCAATGCTGGGTTGCCCTTACCATCAAATTATTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCACCCTTTGAGGTTGTAAAGAATATTTGGGAACAACTGTCAAAACCACCAAAATGTGGAATTATAATCAAAGAAAATCCTGTAATCAACGAACACATTTCGTCCTC
TGAACACTCAAGTGAGGAGACGTCACACCCAAATATAATGTCAGTTATGGTGGCTGACGTGGATACAAGTGAAGACAAAATGACAGAGCTTGAAAAGAAGATTAACATGC
TCATGAAGACAATTGAAGAAAGGAATTATGAGATTGCATCTTTCAAGAATCACATCGAGAGTCGTGACGCTGCTGAATCAAGTCATACACATACTGTCAAGAATACTGAC
CTGGAAGGCAATTATGCAATAAAGTCAACCACAACATTTGACCTCAATTGCATTGTTGTCTGTTCAGTAGTTGTAGGAGATGATAGCAAACTCCACCAAAACTCAACGTT
GTCTATCATATCCAACCCAATGCTGGGTTGCCCTTACCATCAAATTATTTTGTAG
Protein sequenceShow/hide protein sequence
MPPFEVVKNIWEQLSKPPKCGIIIKENPVINEHISSSEHSSEETSHPNIMSVMVADVDTSEDKMTELEKKINMLMKTIEERNYEIASFKNHIESRDAAESSHTHTVKNTD
LEGNYAIKSTTTFDLNCIVVCSVVVGDDSKLHQNSTLSIISNPMLGCPYHQIIL