; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0010878 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010878
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionkeratin, type II cytoskeletal 2 epidermal isoform X1
Genome locationchr09:20839116..20842515
RNA-Seq ExpressionPI0010878
SyntenyPI0010878
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003724 - RNA helicase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141514.1 glycine-rich cell wall structural protein 1 [Cucumis sativus]3.6e-7094.44Show/hide
Query:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNGNRNQ+GED+ GLLWNLPVLKSSRFG LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCG+GLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR
        GDVLRG QSIFPHQD+IGALVDDLVLNTKRLIRATS+EIDKWKR
Subjt:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR

XP_016902400.1 PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo]5.6e-7195.14Show/hide
Query:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNGNRN++GED+ GLLWNLPVLKSSRFG LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCG+GLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR
        GDVLRGHQSIFPHQD+IGALVDDLVLNTKRLIRATSREIDKWKR
Subjt:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR

XP_022932819.1 keratin, type II cytoskeletal 2 epidermal isoform X1 [Cucurbita moschata]4.3e-6384.03Show/hide
Query:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R++ GED++G+LW LPVLKSSR G+LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCG+GLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR
        GD+L G QSIFPH+D IGALVD+L LNTK+LIR T++EIDKWKR
Subjt:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR

XP_023521208.1 ATP-dependent RNA helicase glh-2 isoform X1 [Cucurbita pepo subsp. pepo]1.5e-6384.72Show/hide
Query:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R++  ED++G+LW LPVLKSSR G+LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCG+GLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR
        GD+L GHQSIFPH+D IGALVD+L LNTK+LIR T+REIDKWKR
Subjt:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR

XP_038889093.1 ctenidin-1 isoform X1 [Benincasa hispida]2.4e-6690.28Show/hide
Query:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV
        MPRN NGNR+Q GED+ GLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCG+GLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR
        GD+L GHQSIFP +D+I ALVD+LVLN+KRLIRATSREIDKWKR
Subjt:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR

TrEMBL top hitse value%identityAlignment
A0A0A0KSM8 Uncharacterized protein1.8e-7094.44Show/hide
Query:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNGNRNQ+GED+ GLLWNLPVLKSSRFG LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCG+GLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR
        GDVLRG QSIFPHQD+IGALVDDLVLNTKRLIRATS+EIDKWKR
Subjt:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR

A0A1S4E347 glycine-rich cell wall structural protein 12.7e-7195.14Show/hide
Query:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNGNRN++GED+ GLLWNLPVLKSSRFG LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCG+GLGFGYGVGRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR
        GDVLRGHQSIFPHQD+IGALVDDLVLNTKRLIRATSREIDKWKR
Subjt:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR

A0A6J1EY31 keratin, type II cytoskeletal 2 epidermal isoform X12.1e-6384.03Show/hide
Query:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R++ GED++G+LW LPVLKSSR G+LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCG+GLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR
        GD+L G QSIFPH+D IGALVD+L LNTK+LIR T++EIDKWKR
Subjt:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR

A0A6J1F360 keratin, type II cytoskeletal 2 epidermal isoform X21.1e-6184.03Show/hide
Query:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R++ GED++G+LW LPVLKSSR G+LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCG+GLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR
        GD+L G QSIFP QD IGALVD+L LNTK+LIR T++EIDKWKR
Subjt:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR

A0A6J1ICW2 keratin, type II cytoskeletal 3 isoform X11.4e-6282.64Show/hide
Query:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV
        MPRNMNG+R + GED++G+LW LPVLKSSR G+LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCG+GLGFGYG GRGIAQDDKRRYSNV
Subjt:  MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNV

Query:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR
        GD+L G QSIFPH+D IGA+VD+L LNTK+LI+ T++EIDKWKR
Subjt:  GDVLRGHQSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27695.1 glycine-rich protein1.3e-0453.45Show/hide
Query:  SRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVG
        S F  +G  FG GVGC  GFG+G     GFG G+P   LG G G GCG+GLG G+G G
Subjt:  SRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVG

AT1G27695.2 glycine-rich protein1.3e-0453.45Show/hide
Query:  SRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVG
        S F  +G  FG GVGC  GFG+G     GFG G+P   LG G G GCG+GLG G+G G
Subjt:  SRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVG

AT1G66820.1 glycine-rich protein5.5e-0851.43Show/hide
Query:  LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQ-----LGFGLGAGCGIGLGFGYGVGRGIAQDD-KRRY
        +GP  G G+GCG G GIGL GG G G    GL      LGFG+G G G G G+G+GVG G + DD K R+
Subjt:  LGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQ-----LGFGLGAGCGIGLGFGYGVGRGIAQDD-KRRY

AT4G10330.1 glycine-rich protein8.4e-4159.26Show/hide
Query:  NRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNVGDVLRGH
        NR + G+DD GLLW LP ++    GK+GPAFGLGVGCG GFG GL+GG GFGPG+PGLQ G G GAGCGIG+GFGYGVGRG A D  R Y NVG      
Subjt:  NRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNVGDVLRGH

Query:  QSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKW
            P  + + +L+D+LV++TK+L++AT+ EIDKW
Subjt:  QSIFPHQDNIGALVDDLVLNTKRLIRATSREIDKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACGAAATATGAACGGAAACAGAAACCAAAACGGAGAAGATGATAACGGATTATTGTGGAATCTTCCAGTTCTTAAATCTTCTAGATTCGGAAAGTTAGGTCCCGC
CTTCGGTCTCGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGTCGGAGGTGCTGGATTTGGTCCAGGAATTCCTGGCTTACAACTTGGCTTTGGTCTTGGTGCTG
GATGTGGCATTGGCTTAGGATTTGGCTATGGTGTTGGCAGGGGCATTGCCCAAGATGACAAACGCAGATACTCTAACGTTGGGGATGTATTGCGCGGTCATCAAAGTATT
TTCCCTCATCAGGACAATATCGGCGCGCTTGTTGACGACCTTGTCCTAAATACAAAGAGGCTTATCCGAGCTACTTCAAGGGAGATTGACAAGTGGAAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATTTAACCTAAAACCATAGTTGACAAATATAGTCAAGGCAGGAGTCTGCTTAAAAAAATATTGGAAGGAAGAAGGTAGAGTATTTTTTACTATTTTCTATTGTTATTTGT
GAAATAGTTTGTTCATATCATCTTCTTCTTATTCGTCCGGAGGAGGAAGAAACAAATCAGAAATGCCACGAAATATGAACGGAAACAGAAACCAAAACGGAGAAGATGAT
AACGGATTATTGTGGAATCTTCCAGTTCTTAAATCTTCTAGATTCGGAAAGTTAGGTCCCGCCTTCGGTCTCGGCGTTGGTTGTGGCGTCGGCTTTGGCATCGGCCTCGT
CGGAGGTGCTGGATTTGGTCCAGGAATTCCTGGCTTACAACTTGGCTTTGGTCTTGGTGCTGGATGTGGCATTGGCTTAGGATTTGGCTATGGTGTTGGCAGGGGCATTG
CCCAAGATGACAAACGCAGATACTCTAACGTTGGGGATGTATTGCGCGGTCATCAAAGTATTTTCCCTCATCAGGACAATATCGGCGCGCTTGTTGACGACCTTGTCCTA
AATACAAAGAGGCTTATCCGAGCTACTTCAAGGGAGATTGACAAGTGGAAAAGATGAAATTACTCATTCGTTATTAAATTGTACAAGTCTATTAGAAAGAACCACAATCA
AAATTGAAGAAAAAAAGAAACGTGCTGGCTGTCTATATGGTATATTATTACTTTGGCTTTTAGAGGCAGAATTTATGTGTAATTGTTTAGAAAGATGTATTTAGTTGCTC
TAAATCTTATATGCATTGGGTTTTGAGCAATCTTAAAATACCGAATGCTTAATGTCAATGTTTAGAAGGTCCCTAGATGGCTGTATTATCATGTCCATTCTGCAGAAAAA
AAAACCTTTTTATTATACTTAGTTCATTTTAAGCTTTTTCTGGTTCA
Protein sequenceShow/hide protein sequence
MPRNMNGNRNQNGEDDNGLLWNLPVLKSSRFGKLGPAFGLGVGCGVGFGIGLVGGAGFGPGIPGLQLGFGLGAGCGIGLGFGYGVGRGIAQDDKRRYSNVGDVLRGHQSI
FPHQDNIGALVDDLVLNTKRLIRATSREIDKWKR