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PI0010879 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010879
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr09:18315556..18315933
RNA-Seq ExpressionPI0010879
SyntenyPI0010879
Gene Ontology termsGO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044249 - cellular biosynthetic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:1901576 - organic substance biosynthetic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025506.1 transcription initiation factor TFIID subunit 2-like [Cucumis melo var. makuwa]3.8e-2365.22Show/hide
Query:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELY
        MAV RYD E FDGKG F+LWKAK+KAI+ Q+K  KA+ +P KLP+KMT EEKE ME  AYG +VLNLSDN+LR+VI + TA+ M  KL ELY
Subjt:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELY

KAA0051442.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]4.9e-2351.85Show/hide
Query:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNK
        M  T+++ E FDG GDF+LW  +I AIL  QKA KALE+P +LP  +T  E+E +E  AY TL++N++DN+LRQVI++TTAF    KL  LYE  + PNK
Subjt:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNK

Query:  MYCMTLLF
        M+    LF
Subjt:  MYCMTLLF

XP_038889301.1 uncharacterized protein LOC120079211 [Benincasa hispida]1.5e-2454.13Show/hide
Query:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNK
        MA TRY+ E FDGK +F LWKAKIK +L QQKA  A+ NP+K PE +T  EK+ +E+NAYGT+VLN+ D++LRQ++DQTTA+ +  KLNE Y   +  NK
Subjt:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNK

Query:  MYCMTLLFI
             + FI
Subjt:  MYCMTLLFI

XP_038890043.1 uncharacterized protein LOC120079747 [Benincasa hispida]4.9e-2350.41Show/hide
Query:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNK
        MA TRY+ E FD K DF LWK KIK +L QQKA  A+ +P+K PE +T  EKE +E+NA GT+VLN++DN+LRQVI+Q TA+ +  KLNE+Y   +  NK
Subjt:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNK

Query:  MYCMTLLFILLL-CDGSLTSIEN
         +     F   +    SLT I N
Subjt:  MYCMTLLFILLL-CDGSLTSIEN

XP_038902421.1 uncharacterized protein LOC120089066 [Benincasa hispida]1.7e-2350.93Show/hide
Query:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNK
        MA TR++ E FDG  +F LWKAKIK +L QQK   A+ +P+K P+ +T  EK  +E+NAYGT+VLN++D++LRQ++DQ TAF  C KLNE+Y   + PNK
Subjt:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNK

Query:  MYCMTLLF
         +   + F
Subjt:  MYCMTLLF

TrEMBL top hitse value%identityAlignment
A0A5A7U6R2 Retrovirus-related Pol polyprotein from transposon TNT 1-942.4e-2351.85Show/hide
Query:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNK
        M  T+++ E FDG GDF+LW  +I AIL  QKA KALE+P +LP  +T  E+E +E  AY TL++N++DN+LRQVI++TTAF    KL  LYE  + PNK
Subjt:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNK

Query:  MYCMTLLF
        M+    LF
Subjt:  MYCMTLLF

A0A5A7UZ07 Retrotransposon protein, putative, Ty1-copia subclass1.1e-2049.07Show/hide
Query:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNK
        M  T+++ E FDG GDF+L   +I AIL  QKA KALE+P +L   +T  E+E +E  AYGTL++N+++N+LRQ+I++TTAF    KL  LYE  + PNK
Subjt:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNK

Query:  MYCMTLLF
        M+    LF
Subjt:  MYCMTLLF

A0A5C7GXL9 Sucrose-phosphate phosphatase9.4e-2047.12Show/hide
Query:  RYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNKMYCM
        ++D + FDG GDF +W+ K+KA+L QQK  KA+E P KLP+ +T E+K++M   A GT++LNLSDN+LR++ D+ TA  +  KL  LY   +  NK+Y  
Subjt:  RYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNKMYCM

Query:  TLLF
          LF
Subjt:  TLLF

A0A5C7HB65 gag_pre-integrs domain-containing protein9.4e-2047.12Show/hide
Query:  RYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNKMYCM
        ++D + FDG GDF +W+ K+KA+L QQK  KA+E P KLP+ +T E+K++M   A GT++LNLSDN+LR++ D+ TA  +  KL  LY   +  NK+Y  
Subjt:  RYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNKMYCM

Query:  TLLF
          LF
Subjt:  TLLF

A0A5D3BQH4 Transcription initiation factor TFIID subunit 2-like1.8e-2365.22Show/hide
Query:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELY
        MAV RYD E FDGKG F+LWKAK+KAI+ Q+K  KA+ +P KLP+KMT EEKE ME  AYG +VLNLSDN+LR+VI + TA+ M  KL ELY
Subjt:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELY

SwissProt top hitse value%identityAlignment
P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-941.4e-1231.9Show/hide
Query:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNK
        M+  +Y+   F+G   FS W+ +++ +L QQ  +K L+  SK P+ M AE+  +++  A   + L+LSD+++  +ID+ TA  + T+L  LY +    NK
Subjt:  MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNK

Query:  MYCMTLLFILLLCDGS
        +Y    L+ L + +G+
Subjt:  MYCMTLLFILLLCDGS

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTACAAGATATGACAATGAAAATTTTGATGGGAAAGGTGACTTTAGTCTTTGGAAGGCAAAAATCAAGGCTATCTTGGACCAACAAAAAGCATATAAAGCTTT
AGAAAATCCTTCCAAGTTACCTGAAAAAATGACAGCAGAAGAAAAAGAGAACATGGAGCTAAATGCATATGGAACACTTGTGTTGAACCTATCCGACAACATTCTAAGGC
AGGTTATTGATCAAACCACTGCTTTTAAAATGTGCACGAAGTTAAATGAGCTTTATGAAGCAAATAATTTTCCTAATAAAATGTATTGTATGACATTGCTTTTTATCTTG
TTGTTGTGTGATGGTTCTTTAACTTCAATTGAAAACCATAGAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTTACAAGATATGACAATGAAAATTTTGATGGGAAAGGTGACTTTAGTCTTTGGAAGGCAAAAATCAAGGCTATCTTGGACCAACAAAAAGCATATAAAGCTTT
AGAAAATCCTTCCAAGTTACCTGAAAAAATGACAGCAGAAGAAAAAGAGAACATGGAGCTAAATGCATATGGAACACTTGTGTTGAACCTATCCGACAACATTCTAAGGC
AGGTTATTGATCAAACCACTGCTTTTAAAATGTGCACGAAGTTAAATGAGCTTTATGAAGCAAATAATTTTCCTAATAAAATGTATTGTATGACATTGCTTTTTATCTTG
TTGTTGTGTGATGGTTCTTTAACTTCAATTGAAAACCATAGAATATGA
Protein sequenceShow/hide protein sequence
MAVTRYDNENFDGKGDFSLWKAKIKAILDQQKAYKALENPSKLPEKMTAEEKENMELNAYGTLVLNLSDNILRQVIDQTTAFKMCTKLNELYEANNFPNKMYCMTLLFIL
LLCDGSLTSIENHRI