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PI0010911 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010911
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr08:7002913..7003414
RNA-Seq ExpressionPI0010911
SyntenyPI0010911
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025858.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-3962.41Show/hide
Query:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVL-GVLEGFSDDYGNYIE
        +K+ FQ IAEM GL+CSGF WNDE KCI+AEKELFDNWV+SH AAKGLLNKPF +YD++ YVFG+DRATG   +TFA+ GSN   G  + F    GN  +
Subjt:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVL-GVLEGFSDDYGNYIE

Query:  IPMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ
         P +YSQG+D+S DD+  +R  R+SEGRT SSGSKRK G Q
Subjt:  IPMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ

KAA0049911.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-3962.86Show/hide
Query:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLGVLEGFSDDYGNYIEI
        +K+ FQVIAEM G +CSGF WNDE KCIIAEKELFDNWV+SH  AKGLLNKPF +YD++ YVFG+DRATG  V+TFA+  SN  G      D      E 
Subjt:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLGVLEGFSDDYGNYIEI

Query:  PMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ
        P +YSQG+D+S DD+  +R  R+SEGRTGSSGSKRK G Q
Subjt:  PMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ

KAA0050293.1 retrotransposon protein [Cucumis melo var. makuwa]2.9e-4062.41Show/hide
Query:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLG-VLEGFSDDYGNYIE
        +K+ FQ IAEM GL+CSGF WNDE KCI+AEKELFDNWV+SH  AKGLLNKPF +YD++ YVFG+DRATG   +TFA+ GSN  G   + F    GN  +
Subjt:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLG-VLEGFSDDYGNYIE

Query:  IPMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ
         P++YSQG+D+S DD+  +R  R+SEGRTGSSGSKRK G Q
Subjt:  IPMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ

KAA0063726.1 retrotransposon protein [Cucumis melo var. makuwa]7.7e-4162.59Show/hide
Query:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLGVLEGFSDDYGNYIEI
        MK++F  + EMCG  CSGF WNDE KCI+AEKE+FD+WVKSH AAKGLLNK F HYD++ YVFGKDRATG RV++FAN  SN     + F+ D     + 
Subjt:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLGVLEGFSDDYGNYIEI

Query:  PMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGG
        P MYSQGL+MSPDD+ GTR+ R SE R  SSGSKRK  G
Subjt:  PMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGG

TYK07652.1 retrotransposon protein [Cucumis melo var. makuwa]1.1e-3962.86Show/hide
Query:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLGVLEGFSDDYGNYIEI
        +K+ FQVIAEM G +CSGF WNDE KCIIAEKELFDNWV+SH  AKGLLNKPF +YD++ YVFG+DRATG  V+TFA+  SN  G      D      E 
Subjt:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLGVLEGFSDDYGNYIEI

Query:  PMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ
        P +YSQG+D+S DD+  +R  R+SEGRTGSSGSKRK G Q
Subjt:  PMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ

TrEMBL top hitse value%identityAlignment
A0A5A7SI64 Retrotransposon protein5.4e-4062.41Show/hide
Query:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVL-GVLEGFSDDYGNYIE
        +K+ FQ IAEM GL+CSGF WNDE KCI+AEKELFDNWV+SH AAKGLLNKPF +YD++ YVFG+DRATG   +TFA+ GSN   G  + F    GN  +
Subjt:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVL-GVLEGFSDDYGNYIE

Query:  IPMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ
         P +YSQG+D+S DD+  +R  R+SEGRT SSGSKRK G Q
Subjt:  IPMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ

A0A5A7U308 Retrotransposon protein1.4e-4062.41Show/hide
Query:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLG-VLEGFSDDYGNYIE
        +K+ FQ IAEM GL+CSGF WNDE KCI+AEKELFDNWV+SH  AKGLLNKPF +YD++ YVFG+DRATG   +TFA+ GSN  G   + F    GN  +
Subjt:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLG-VLEGFSDDYGNYIE

Query:  IPMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ
         P++YSQG+D+S DD+  +R  R+SEGRTGSSGSKRK G Q
Subjt:  IPMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ

A0A5A7VBC5 Retrotransposon protein3.8e-4162.59Show/hide
Query:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLGVLEGFSDDYGNYIEI
        MK++F  + EMCG  CSGF WNDE KCI+AEKE+FD+WVKSH AAKGLLNK F HYD++ YVFGKDRATG RV++FAN  SN     + F+ D     + 
Subjt:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLGVLEGFSDDYGNYIEI

Query:  PMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGG
        P MYSQGL+MSPDD+ GTR+ R SE R  SSGSKRK  G
Subjt:  PMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGG

A0A5A7VES2 Retrotransposon protein5.4e-4063.12Show/hide
Query:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVL-GVLEGFSDDYGNYIE
        +K+ FQ IAEM G +CSGF WNDE KCIIAEKELFDNWV+SH AAKGLLNKPF +YD++ YVFG+DRATG   +TFA+ GSN   G  + F    GN  +
Subjt:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVL-GVLEGFSDDYGNYIE

Query:  IPMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ
         P +YSQG+D+S DD+  +R  R+SEGRTGSSGSKRK G Q
Subjt:  IPMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ

A0A5D3C8P0 Retrotransposon protein5.4e-4062.86Show/hide
Query:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLGVLEGFSDDYGNYIEI
        +K+ FQVIAEM G +CSGF WNDE KCIIAEKELFDNWV+SH  AKGLLNKPF +YD++ YVFG+DRATG  V+TFA+  SN  G      D      E 
Subjt:  MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLGVLEGFSDDYGNYIEI

Query:  PMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ
        P +YSQG+D+S DD+  +R  R+SEGRTGSSGSKRK G Q
Subjt:  PMMYSQGLDMSPDDIAGTRSGRSSEGRTGSSGSKRKWGGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G24960.2 unknown protein1.9e-0528.07Show/hide
Query:  LSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATG
        L  +GFSW+     +IA+ ++++ ++++H  A+    K    Y ++C++FGK+ + G
Subjt:  LSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATG

AT4G02210.1 unknown protein7.3e-0527.45Show/hide
Query:  LSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFG
        L   GF+W++E + + A+  ++ +++K+H  A+  + +P  +Y D+C + G
Subjt:  LSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFG

AT4G02210.2 unknown protein7.3e-0527.45Show/hide
Query:  LSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFG
        L   GF+W++E + + A+  ++ +++K+H  A+  + +P  +Y D+C + G
Subjt:  LSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAATATTCCAAGTCATCGCAGAAATGTGCGGGCTGTCGTGTAGTGGGTTCAGTTGGAACGACGAAGTGAAGTGCATCATCGCTGAGAAGGAGTTGTTCGACAA
TTGGGTAAAGAGTCATTCTGCTGCCAAGGGCCTCCTAAACAAGCCATTTCATCATTACGATGATATGTGCTACGTATTTGGAAAAGATCGTGCGACGGGAGCTCGCGTGA
AGACATTCGCTAATGGGGGGTCAAATGTGCTTGGAGTGCTCGAGGGATTTTCCGATGATTATGGAAACTATATAGAGATCCCTATGATGTACAGTCAAGGACTAGACATG
TCGCCTGATGACATTGCAGGTACACGATCCGGTCGCTCAAGTGAGGGTAGGACTGGTTCAAGCGGATCGAAGAGAAAGTGGGGAGGCCAGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAATATTCCAAGTCATCGCAGAAATGTGCGGGCTGTCGTGTAGTGGGTTCAGTTGGAACGACGAAGTGAAGTGCATCATCGCTGAGAAGGAGTTGTTCGACAA
TTGGGTAAAGAGTCATTCTGCTGCCAAGGGCCTCCTAAACAAGCCATTTCATCATTACGATGATATGTGCTACGTATTTGGAAAAGATCGTGCGACGGGAGCTCGCGTGA
AGACATTCGCTAATGGGGGGTCAAATGTGCTTGGAGTGCTCGAGGGATTTTCCGATGATTATGGAAACTATATAGAGATCCCTATGATGTACAGTCAAGGACTAGACATG
TCGCCTGATGACATTGCAGGTACACGATCCGGTCGCTCAAGTGAGGGTAGGACTGGTTCAAGCGGATCGAAGAGAAAGTGGGGAGGCCAGTGGTAG
Protein sequenceShow/hide protein sequence
MKKIFQVIAEMCGLSCSGFSWNDEVKCIIAEKELFDNWVKSHSAAKGLLNKPFHHYDDMCYVFGKDRATGARVKTFANGGSNVLGVLEGFSDDYGNYIEIPMMYSQGLDM
SPDDIAGTRSGRSSEGRTGSSGSKRKWGGQW