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PI0010958 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010958
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:9866332..9867478
RNA-Seq ExpressionPI0010958
SyntenyPI0010958
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032766.1 retrotransposon protein [Cucumis melo var. makuwa]1.2e-6560.37Show/hide
Query:  TLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITAST-IDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDLYDNWVKSHPAT
        TL++CL+ELVS GGW+SDNGTFRPGY + L +MMAE++    + A+T IDC IKTLKR FQAI++MR P    FGWNDE KCI+AEK+L+DNWV+SHPA 
Subjt:  TLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITAST-IDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDLYDNWVKSHPAT

Query:  KGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAGN----DM-----KFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKRKWGEQAFKTA
        KGLLNK FP+YD+L Y+FGRDRATG  AETFADVGSN P G     DM      FP +YSQG+D+S DD+  +RP R  E RTGS+GSKRK G Q     
Subjt:  KGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAGN----DM-----KFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKRKWGEQAFKTA

Query:  EIIRSAMEYANDQLKAI
        E I  A++  N+QL+ I
Subjt:  EIIRSAMEYANDQLKAI

KAA0064022.1 retrotransposon protein [Cucumis melo var. makuwa]7.3e-6660.37Show/hide
Query:  TLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITAST-IDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDLYDNWVKSHPAT
        TL++CL+ELVS GGW+SDNGTFRPGY + L +MMA+++    + A+T IDC IKTLKR FQAI++MR P    FGWNDE KCI+AEK+L+DNWV+SHPA 
Subjt:  TLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITAST-IDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDLYDNWVKSHPAT

Query:  KGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAGN----DM-----KFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKRKWGEQAFKTA
        KGLLNKSFP+YD+L Y+FGRDRATG  AETFADVGSN P G     DM      FP +YSQG+D+S DD+  +RP R  E RTGS+GSKRK G Q     
Subjt:  KGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAGN----DM-----KFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKRKWGEQAFKTA

Query:  EIIRSAMEYANDQLKAI
        E I  A++  N+QL+ I
Subjt:  EIIRSAMEYANDQLKAI

KAA0066208.1 retrotransposon protein [Cucumis melo var. makuwa]7.3e-6660.83Show/hide
Query:  TLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITAST-IDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDLYDNWVKSHPAT
        TL++CL+ELVS GGW+SDNGTFRPGY + L +MMAE++    + A+T IDC IKTLKR FQAI++MR P    FGWNDE KCIIAEK+L+DNWV+SHPA 
Subjt:  TLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITAST-IDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDLYDNWVKSHPAT

Query:  KGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAGN----DM-----KFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKRKWGEQAFKTA
        KGLLNK FP+YD+L Y+FGRDRATG  AETFADVGSN P G     DM      FP +YSQG+D+S DD+  +RP R  E RTGS+GSKRK G Q     
Subjt:  KGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAGN----DM-----KFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKRKWGEQAFKTA

Query:  EIIRSAMEYANDQLKAI
        E I  A++  N+QL+ I
Subjt:  EIIRSAMEYANDQLKAI

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]8.6e-6758.15Show/hide
Query:  PKAPLDERGNATLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITASTIDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDLY
        PK    +   A+L++CLVELV+AGGWRSDNGTFRPGY + L +MMA ++   NI ASTID  IK +KR F A+++MR P    FGWNDE KCI+ EK+L+
Subjt:  PKAPLDERGNATLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITASTIDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDLY

Query:  DNWVKSHPATKGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAG---------NDMKFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKR
        D+WVKSHPA KGLLNKSF HYD+L Y+FG+DRATGGRAE+FAD+GSN P G          D  FP MYS GL+MSPDD+M TR  R+ E R  S+GSKR
Subjt:  DNWVKSHPATKGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAG---------NDMKFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKR

Query:  KWGEQAFKTAEIIRSAMEYANDQLKAI
        K    A  + +I+R+A+EY N+QL  I
Subjt:  KWGEQAFKTAEIIRSAMEYANDQLKAI

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]5.6e-6654.17Show/hide
Query:  PKAPLDERGNATLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNI-TASTIDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDL
        PK    +      ++CLVELVS+GGWRSDNGTF+PGY + LQ+MMAE++   NI  +STIDC +K+LK+ + AI++MR P    FGWN+E +CIIAE+DL
Subjt:  PKAPLDERGNATLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNI-TASTIDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDL

Query:  YDNWVKSHPATKGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNV--------PAG--NDMKFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGS
        +D+W+KSHPA KGLL+KSFP+YDDL Y+FG+DRATG R+ETF +VGSNV        P G  +D   PTMYSQG+ MSPD++ G R  +  E R  S+ S
Subjt:  YDNWVKSHPATKGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNV--------PAG--NDMKFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGS

Query:  KRKWGEQAFKTAEIIRSAMEYANDQLKAIENDSKNNAEMQ
        KRK G + ++T E+IRS ME+ N+QLKAI +  K    M+
Subjt:  KRKWGEQAFKTAEIIRSAMEYANDQLKAIENDSKNNAEMQ

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859532.7e-6654.17Show/hide
Query:  PKAPLDERGNATLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNI-TASTIDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDL
        PK    +      ++CLVELVS+GGWRSDNGTF+PGY + LQ+MMAE++   NI  +STIDC +K+LK+ + AI++MR P    FGWN+E +CIIAE+DL
Subjt:  PKAPLDERGNATLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNI-TASTIDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDL

Query:  YDNWVKSHPATKGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNV--------PAG--NDMKFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGS
        +D+W+KSHPA KGLL+KSFP+YDDL Y+FG+DRATG R+ETF +VGSNV        P G  +D   PTMYSQG+ MSPD++ G R  +  E R  S+ S
Subjt:  YDNWVKSHPATKGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNV--------PAG--NDMKFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGS

Query:  KRKWGEQAFKTAEIIRSAMEYANDQLKAIENDSKNNAEMQ
        KRK G + ++T E+IRS ME+ N+QLKAI +  K    M+
Subjt:  KRKWGEQAFKTAEIIRSAMEYANDQLKAIENDSKNNAEMQ

A0A5A7U0H7 Retrotransposon protein2.7e-6654.17Show/hide
Query:  PKAPLDERGNATLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNI-TASTIDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDL
        PK    +      ++CLVELVS+GGWRSDNGTF+PGY + LQ+MMAE++   NI  +STIDC +K+LK+ + AI++MR P    FGWN+E +CIIAE+DL
Subjt:  PKAPLDERGNATLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNI-TASTIDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDL

Query:  YDNWVKSHPATKGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNV--------PAG--NDMKFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGS
        +D+W+KSHPA KGLL+KSFP+YDDL Y+FG+DRATG R+ETF +VGSNV        P G  +D   PTMYSQG+ MSPD++ G R  +  E R  S+ S
Subjt:  YDNWVKSHPATKGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNV--------PAG--NDMKFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGS

Query:  KRKWGEQAFKTAEIIRSAMEYANDQLKAIENDSKNNAEMQ
        KRK G + ++T E+IRS ME+ N+QLKAI +  K    M+
Subjt:  KRKWGEQAFKTAEIIRSAMEYANDQLKAIENDSKNNAEMQ

A0A5A7V6Q9 Retrotransposon protein3.5e-6660.37Show/hide
Query:  TLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITAST-IDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDLYDNWVKSHPAT
        TL++CL+ELVS GGW+SDNGTFRPGY + L +MMA+++    + A+T IDC IKTLKR FQAI++MR P    FGWNDE KCI+AEK+L+DNWV+SHPA 
Subjt:  TLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITAST-IDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDLYDNWVKSHPAT

Query:  KGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAGN----DM-----KFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKRKWGEQAFKTA
        KGLLNKSFP+YD+L Y+FGRDRATG  AETFADVGSN P G     DM      FP +YSQG+D+S DD+  +RP R  E RTGS+GSKRK G Q     
Subjt:  KGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAGN----DM-----KFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKRKWGEQAFKTA

Query:  EIIRSAMEYANDQLKAI
        E I  A++  N+QL+ I
Subjt:  EIIRSAMEYANDQLKAI

A0A5A7VES2 Retrotransposon protein3.5e-6660.83Show/hide
Query:  TLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITAST-IDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDLYDNWVKSHPAT
        TL++CL+ELVS GGW+SDNGTFRPGY + L +MMAE++    + A+T IDC IKTLKR FQAI++MR P    FGWNDE KCIIAEK+L+DNWV+SHPA 
Subjt:  TLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITAST-IDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDLYDNWVKSHPAT

Query:  KGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAGN----DM-----KFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKRKWGEQAFKTA
        KGLLNK FP+YD+L Y+FGRDRATG  AETFADVGSN P G     DM      FP +YSQG+D+S DD+  +RP R  E RTGS+GSKRK G Q     
Subjt:  KGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAGN----DM-----KFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKRKWGEQAFKTA

Query:  EIIRSAMEYANDQLKAI
        E I  A++  N+QL+ I
Subjt:  EIIRSAMEYANDQLKAI

A0A5D3C1M0 Retrotransposon protein4.2e-6758.15Show/hide
Query:  PKAPLDERGNATLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITASTIDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDLY
        PK    +   A+L++CLVELV+AGGWRSDNGTFRPGY + L +MMA ++   NI ASTID  IK +KR F A+++MR P    FGWNDE KCI+ EK+L+
Subjt:  PKAPLDERGNATLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITASTIDCWIKTLKRAFQAISKMRDP--YRFGWNDELKCIIAEKDLY

Query:  DNWVKSHPATKGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAG---------NDMKFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKR
        D+WVKSHPA KGLLNKSF HYD+L Y+FG+DRATGGRAE+FAD+GSN P G          D  FP MYS GL+MSPDD+M TR  R+ E R  S+GSKR
Subjt:  DNWVKSHPATKGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAG---------NDMKFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKR

Query:  KWGEQAFKTAEIIRSAMEYANDQLKAI
        K    A  + +I+R+A+EY N+QL  I
Subjt:  KWGEQAFKTAEIIRSAMEYANDQLKAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein6.3e-0733.75Show/hide
Query:  IKTLKRAFQA-ISKMRDPYRFGWNDELKCIIAEKDLYDNWVKSHPATKGLLNKSFPHYDDLCYIFGRDRATGGRAETFAD
        +K LK  +Q+ +   R    FGW+ E K   A  +++ +++K+HP  K +  +S  H++DL  IFG   ATG  A   +D
Subjt:  IKTLKRAFQA-ISKMRDPYRFGWNDELKCIIAEKDLYDNWVKSHPATKGLLNKSFPHYDDLCYIFGRDRATGGRAETFAD

AT2G24960.2 unknown protein1.8e-0926.45Show/hide
Query:  LIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITASTIDCWIKTLKRAFQAISKMRDPYRFGWNDELKCIIAEKDLYDNWVKSHPATKGLL
        LI  LVE V+ G  R         ++  +    A+  S+HN     +    K L+R +  I  + +   F W+     +IA+ D+++ ++++HP  +   
Subjt:  LIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITASTIDCWIKTLKRAFQAISKMRDPYRFGWNDELKCIIAEKDLYDNWVKSHPATKGLL

Query:  NKSFPHYDDLCYIFGRDRATG
         K+ P Y +LC+IFG++ + G
Subjt:  NKSFPHYDDLCYIFGRDRATG

AT4G02210.1 unknown protein2.8e-0730.16Show/hide
Query:  KTLKRAFQAISKMRDPYRFGWNDELKCIIAEKDLYDNWVKSHPATKGLLNKSFPHYDDLCYIF
        KTL+  F++++ +     F W+D  + ++A+  ++D ++K HP ++    KS P Y DLC ++
Subjt:  KTLKRAFQAISKMRDPYRFGWNDELKCIIAEKDLYDNWVKSHPATKGLLNKSFPHYDDLCYIF

AT4G02210.2 unknown protein2.8e-0730.16Show/hide
Query:  KTLKRAFQAISKMRDPYRFGWNDELKCIIAEKDLYDNWVKSHPATKGLLNKSFPHYDDLCYIF
        KTL+  F++++ +     F W+D  + ++A+  ++D ++K HP ++    KS P Y DLC ++
Subjt:  KTLKRAFQAISKMRDPYRFGWNDELKCIIAEKDLYDNWVKSHPATKGLLNKSFPHYDDLCYIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATACCAGATGACGTTGATGAGGGTGATTCTACATACGCCACCACTGGCGTATGACAACTTCTTCAAGGACCCCAAAGCACCACTAGACGAAAGAGGAAATGCCAC
CCTCATTAAATGTTTGGTGGAATTGGTATCAGCCGGCGGCTGGAGGTCAGACAACGGGACATTTAGACCCGGTTACCATAGTCATTTGCAGAAAATGATGGCCGAGAGGA
TGTCGAGACATAACATAACGGCTTCGACAATTGATTGTTGGATAAAGACGCTTAAAAGAGCGTTCCAAGCCATATCTAAAATGAGGGACCCATATAGGTTCGGTTGGAAC
GACGAGCTCAAATGTATCATTGCGGAGAAAGATTTGTACGACAATTGGGTGAAGAGTCATCCAGCCACAAAGGGTCTCCTAAACAAATCCTTTCCCCATTACGACGACCT
ATGCTACATCTTTGGAAGAGATCGTGCAACAGGAGGTCGTGCTGAAACCTTTGCCGATGTTGGGTCGAACGTGCCTGCAGGGAACGATATGAAGTTCCCCACGATGTACA
GTCAGGGACTAGACATGTCACCTGACGACATAATGGGTACACGACCCGATCGGTTGTTTGAGGATAGGACTGGTTCGAACGGTTCGAAGAGAAAATGGGGAGAGCAGGCG
TTCAAGACGGCAGAAATTATTCGCAGTGCCATGGAATATGCGAATGACCAGCTGAAGGCCATTGAGAATGACTCAAAGAACAATGCCGAGATGCAAGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACATACCAGATGACGTTGATGAGGGTGATTCTACATACGCCACCACTGGCGTATGACAACTTCTTCAAGGACCCCAAAGCACCACTAGACGAAAGAGGAAATGCCAC
CCTCATTAAATGTTTGGTGGAATTGGTATCAGCCGGCGGCTGGAGGTCAGACAACGGGACATTTAGACCCGGTTACCATAGTCATTTGCAGAAAATGATGGCCGAGAGGA
TGTCGAGACATAACATAACGGCTTCGACAATTGATTGTTGGATAAAGACGCTTAAAAGAGCGTTCCAAGCCATATCTAAAATGAGGGACCCATATAGGTTCGGTTGGAAC
GACGAGCTCAAATGTATCATTGCGGAGAAAGATTTGTACGACAATTGGGTGAAGAGTCATCCAGCCACAAAGGGTCTCCTAAACAAATCCTTTCCCCATTACGACGACCT
ATGCTACATCTTTGGAAGAGATCGTGCAACAGGAGGTCGTGCTGAAACCTTTGCCGATGTTGGGTCGAACGTGCCTGCAGGGAACGATATGAAGTTCCCCACGATGTACA
GTCAGGGACTAGACATGTCACCTGACGACATAATGGGTACACGACCCGATCGGTTGTTTGAGGATAGGACTGGTTCGAACGGTTCGAAGAGAAAATGGGGAGAGCAGGCG
TTCAAGACGGCAGAAATTATTCGCAGTGCCATGGAATATGCGAATGACCAGCTGAAGGCCATTGAGAATGACTCAAAGAACAATGCCGAGATGCAAGCGTGA
Protein sequenceShow/hide protein sequence
MTYQMTLMRVILHTPPLAYDNFFKDPKAPLDERGNATLIKCLVELVSAGGWRSDNGTFRPGYHSHLQKMMAERMSRHNITASTIDCWIKTLKRAFQAISKMRDPYRFGWN
DELKCIIAEKDLYDNWVKSHPATKGLLNKSFPHYDDLCYIFGRDRATGGRAETFADVGSNVPAGNDMKFPTMYSQGLDMSPDDIMGTRPDRLFEDRTGSNGSKRKWGEQA
FKTAEIIRSAMEYANDQLKAIENDSKNNAEMQA