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PI0010973 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0010973
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr10:825981..827179
RNA-Seq ExpressionPI0010973
SyntenyPI0010973
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035958.1 uncharacterized protein E6C27_scaffold56G001620 [Cucumis melo var. makuwa]1.6e-2244.87Show/hide
Query:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQN--
        MS+    GKA  DRLVE+EEQMLYL+E+SD++R+LE R+ E+SEK DAIDAV GR++ LPI+ELL RVDTLE        +NYE G SSSS A H +   
Subjt:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQN--

Query:  DYLTCPVSLKIRDVRQVPHLGEIRTTVQVLQRPEGEIGDL-----VVIAGPSNQIP
          L C     +  +  +    + RTT+ V++    EI D+     + +   +NQ+P
Subjt:  DYLTCPVSLKIRDVRQVPHLGEIRTTVQVLQRPEGEIGDL-----VVIAGPSNQIP

KAA0037518.1 uncharacterized protein E6C27_scaffold277G001300 [Cucumis melo var. makuwa]5.9e-2260.82Show/hide
Query:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQ
        MS++   GKA  DRLVEIEEQMLYL+E+ D++R+LE R++E+SEKAD IDAV GR++GLPI+ELL RVD LE        INYE G SSS  AAH +
Subjt:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQ

KAA0039111.1 uncharacterized protein E6C27_scaffold84G002140 [Cucumis melo var. makuwa]1.0e-2160.82Show/hide
Query:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQ
        MS++   GKA  DRLVEIEEQMLYL+E+ D++R+LE R+ E+SEKAD IDAV GR++GLPI+ELL RVD LE        INYE G SSS  AAH +
Subjt:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQ

KAA0061346.1 uncharacterized protein E6C27_scaffold749G00290 [Cucumis melo var. makuwa]1.0e-2160.82Show/hide
Query:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQ
        MS++   GKA  DRLVEIEEQMLYL+E+ D++R+LE R+ E+SEKAD IDAV GR++GLPI+ELL RVD LE        INYE G SSS  AAH +
Subjt:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQ

KAA0062476.1 uncharacterized protein E6C27_scaffold130G00660 [Cucumis melo var. makuwa]4.4e-2567.74Show/hide
Query:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKATRI-NYEHGSSSSSQAAH
        MST KQ+GK  ADRLVE++EQM YL+E+SD++ FL+ R++E+ EKADAIDAVT RLDGLPI+ELLTRVDTLE K  R  NYEHG SS+S  +H
Subjt:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKATRI-NYEHGSSSSSQAAH

TrEMBL top hitse value%identityAlignment
A0A5A7TBW6 Retrotrans_gag domain-containing protein4.9e-2260.82Show/hide
Query:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQ
        MS++   GKA  DRLVEIEEQMLYL+E+ D++R+LE R+ E+SEKAD IDAV GR++GLPI+ELL RVD LE        INYE G SSS  AAH +
Subjt:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQ

A0A5A7V4C9 Uncharacterized protein4.9e-2260.82Show/hide
Query:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQ
        MS++   GKA  DRLVEIEEQMLYL+E+ D++R+LE R+ E+SEKAD IDAV GR++GLPI+ELL RVD LE        INYE G SSS  AAH +
Subjt:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQ

A0A5D3BQN3 Retrotrans_gag domain-containing protein2.9e-2260.82Show/hide
Query:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQ
        MS++   GKA  DRLVEIEEQMLYL+E+ D++R+LE R++E+SEKAD IDAV GR++GLPI+ELL RVD LE        INYE G SSS  AAH +
Subjt:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQ

A0A5D3DUL1 Uncharacterized protein2.1e-2567.74Show/hide
Query:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKATRI-NYEHGSSSSSQAAH
        MST KQ+GK  ADRLVE++EQM YL+E+SD++ FL+ R++E+ EKADAIDAVT RLDGLPI+ELLTRVDTLE K  R  NYEHG SS+S  +H
Subjt:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKATRI-NYEHGSSSSSQAAH

A0A5D3E568 Uncharacterized protein7.6e-2344.87Show/hide
Query:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQN--
        MS+    GKA  DRLVE+EEQMLYL+E+SD++R+LE R+ E+SEK DAIDAV GR++ LPI+ELL RVDTLE        +NYE G SSSS A H +   
Subjt:  MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKAT---RINYEHGSSSSSQAAHWQN--

Query:  DYLTCPVSLKIRDVRQVPHLGEIRTTVQVLQRPEGEIGDL-----VVIAGPSNQIP
          L C     +  +  +    + RTT+ V++    EI D+     + +   +NQ+P
Subjt:  DYLTCPVSLKIRDVRQVPHLGEIRTTVQVLQRPEGEIGDL-----VVIAGPSNQIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCACAGCAAAACAGATGGGCAAGGCCCACGCAGACCGATTGGTAGAGATCGAAGAGCAGATGCTCTACCTGATGGAAATTTCGGACACCGTCCGCTTCCTGGAAGG
ACGGATCAAGGAAGTGTCCGAGAAAGCTGATGCTATTGACGCGGTGACCGGTCGCCTCGACGGTTTACCCATAAAGGAGTTGTTAACAAGAGTTGACACCTTAGAGGCAA
AGGCTACACGAATAAACTACGAACATGGGAGCAGCTCGTCGAGCCAGGCTGCCCACTGGCAAAACGACTATTTGACCTGTCCAGTGAGTCTCAAGATACGAGACGTCCGT
CAAGTTCCTCATCTGGGGGAAATAAGAACAACCGTGCAAGTCCTCCAAAGGCCGGAGGGGGAGATAGGCGATCTAGTGGTGATCGCAGGCCCTTCCAATCAAATACCGGG
AACACGGGGCGAGGACAGAACCCCCAAAACTCTCAGAATCGTCCCCTTGCCTGTTTCATATGTAATGGGCCACACCTGGCGAGAGAATGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCACAGCAAAACAGATGGGCAAGGCCCACGCAGACCGATTGGTAGAGATCGAAGAGCAGATGCTCTACCTGATGGAAATTTCGGACACCGTCCGCTTCCTGGAAGG
ACGGATCAAGGAAGTGTCCGAGAAAGCTGATGCTATTGACGCGGTGACCGGTCGCCTCGACGGTTTACCCATAAAGGAGTTGTTAACAAGAGTTGACACCTTAGAGGCAA
AGGCTACACGAATAAACTACGAACATGGGAGCAGCTCGTCGAGCCAGGCTGCCCACTGGCAAAACGACTATTTGACCTGTCCAGTGAGTCTCAAGATACGAGACGTCCGT
CAAGTTCCTCATCTGGGGGAAATAAGAACAACCGTGCAAGTCCTCCAAAGGCCGGAGGGGGAGATAGGCGATCTAGTGGTGATCGCAGGCCCTTCCAATCAAATACCGGG
AACACGGGGCGAGGACAGAACCCCCAAAACTCTCAGAATCGTCCCCTTGCCTGTTTCATATGTAATGGGCCACACCTGGCGAGAGAATGTCTGA
Protein sequenceShow/hide protein sequence
MSTAKQMGKAHADRLVEIEEQMLYLMEISDTVRFLEGRIKEVSEKADAIDAVTGRLDGLPIKELLTRVDTLEAKATRINYEHGSSSSSQAAHWQNDYLTCPVSLKIRDVR
QVPHLGEIRTTVQVLQRPEGEIGDLVVIAGPSNQIPGTRGEDRTPKTLRIVPLPVSYVMGHTWRENV