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PI0011000 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011000
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibonuclease T(2)
Genome locationchr10:16547286..16548112
RNA-Seq ExpressionPI0011000
SyntenyPI0011000
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR018188 - Ribonuclease T2, His active site 1
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
1V9H_A Crystal structure of the RNase MC1 mutant Y101A in complex with 5'-UMP [Momordica charantia]6.9e-0650Show/hide
Query:  AKEVVTFDYYWLVQQWPRAKCSLRPCNIPVIPG----YFTIHGLWPQQRNFPLLNCAG
        A+  V FD +W VQQWP A CS +       PG     FTIHGLWPQQ    L NC G
Subjt:  AKEVVTFDYYWLVQQWPRAKCSLRPCNIPVIPG----YFTIHGLWPQQRNFPLLNCAG
AAB26702.1 stylar protein, partial [Solanum peruvianum]1.5e-0554.35Show/hide
Query:  FDYYWLVQQWPRAKCSLRPCNIPVIPGYFTIHGLWPQQRNFPLLNC
        FDY+ LV QWPR+ C  R C  PV P  FTIHGLWP ++    +NC
Subjt:  FDYYWLVQQWPRAKCSLRPCNIPVIPGYFTIHGLWPQQRNFPLLNC
CAC33020.1 S2-RNase [Antirrhinum hispanicum]1.4e-0652.08Show/hide
Query:  FDYYWLVQQWPRAKCSLRPCNIP--VIPGYFTIHGLWPQQRNFPLLNC
        FDY+ LV QWP + CSL+  + P   +P  FTIHGLWP  +++PL NC
Subjt:  FDYYWLVQQWPRAKCSLRPCNIP--VIPGYFTIHGLWPQQRNFPLLNC
CCH50735.1 S1-RNase [Antirrhinum hispanicum]5.2e-0646.88Show/hide
Query:  IFIVILLLLGAKEVVTFDYYWLVQQWPRAKCSL--RPCNIPVIPGYFTIHGLWPQQRNFPLLNC
        + IV+L        V F+   LV QWP + CSL  RPC    +P  FTIHGLWP  R++PL NC
Subjt:  IFIVILLLLGAKEVVTFDYYWLVQQWPRAKCSL--RPCNIPVIPGYFTIHGLWPQQRNFPLLNC
Q38716.1 RecName: Full=Ribonuclease S-2; AltName: Full=S2-RNase; AltName: Full=Stylar glycoprotein 2; Flags: Precursor [Antirrhinum hispanicum]1.4e-0652.08Show/hide
Query:  FDYYWLVQQWPRAKCSLRPCNIP--VIPGYFTIHGLWPQQRNFPLLNC
        FDY+ LV QWP + CSL+  + P   +P  FTIHGLWP  +++PL NC
Subjt:  FDYYWLVQQWPRAKCSLRPCNIP--VIPGYFTIHGLWPQQRNFPLLNC
TrEMBL top hitse value%identityAlignment
A0A6J1DEL7 Ribonuclease T(2)2.2e-0551.92Show/hide
Query:  FDYYWLVQQWPRAKCSLRPCNIPVIPG----YFTIHGLWPQQRNFPLLNCAG
        FD +W VQQWP A CS +       PG     FTIHGLWPQQ    L NC G
Subjt:  FDYYWLVQQWPRAKCSLRPCNIPVIPG----YFTIHGLWPQQRNFPLLNCAG
I7IG64 S1-RNase2.5e-0646.88Show/hide
Query:  IFIVILLLLGAKEVVTFDYYWLVQQWPRAKCSL--RPCNIPVIPGYFTIHGLWPQQRNFPLLNC
        + IV+L        V F+   LV QWP + CSL  RPC    +P  FTIHGLWP  R++PL NC
Subjt:  IFIVILLLLGAKEVVTFDYYWLVQQWPRAKCSL--RPCNIPVIPGYFTIHGLWPQQRNFPLLNC
Q40246 S-RNase S32.2e-0554.35Show/hide
Query:  FDYYWLVQQWPRAKCSLRPCNIPVIPGYFTIHGLWPQQRNFPLLNC
        FDY  LV QWPR+ C  R C  PV P  FTIHGLWP ++    +NC
Subjt:  FDYYWLVQQWPRAKCSLRPCNIPVIPGYFTIHGLWPQQRNFPLLNC
Q41200 S protein (Fragment)7.4e-0654.35Show/hide
Query:  FDYYWLVQQWPRAKCSLRPCNIPVIPGYFTIHGLWPQQRNFPLLNC
        FDY+ LV QWPR+ C  R C  PV P  FTIHGLWP ++    +NC
Subjt:  FDYYWLVQQWPRAKCSLRPCNIPVIPGYFTIHGLWPQQRNFPLLNC
Q9AXC0 S2-RNase6.7e-0752.08Show/hide
Query:  FDYYWLVQQWPRAKCSLRPCNIP--VIPGYFTIHGLWPQQRNFPLLNC
        FDY+ LV QWP + CSL+  + P   +P  FTIHGLWP  +++PL NC
Subjt:  FDYYWLVQQWPRAKCSLRPCNIP--VIPGYFTIHGLWPQQRNFPLLNC
SwissProt top hitse value%identityAlignment
O80322 Ribonuclease S-16.0e-0541.67Show/hide
Query:  IFIVILLLLGAKEVVTFDYYWLVQQWPRAKCSLR--PCNIPVIPGYFTIHGLWPQQRNFP
        +F +I+L+L +   V +DY+   QQ+  A C+    PCN P     FT+HGLWP  RN P
Subjt:  IFIVILLLLGAKEVVTFDYYWLVQQWPRAKCSLR--PCNIPVIPGYFTIHGLWPQQRNFP
P23540 Ribonuclease MC1.9e-0650Show/hide
Query:  FDYYWLVQQWPRAKCSLRPCNIPVIPG----YFTIHGLWPQQRNFPLLNC
        FD +W VQQWP A CS +       PG     FTIHGLWPQ     L NC
Subjt:  FDYYWLVQQWPRAKCSLRPCNIPVIPG----YFTIHGLWPQQRNFPLLNC
Q38716 Ribonuclease S-21.8e-0952.08Show/hide
Query:  FDYYWLVQQWPRAKCSLRPCNIP--VIPGYFTIHGLWPQQRNFPLLNC
        FDY+ LV QWP + CSL+  + P   +P  FTIHGLWP  +++PL NC
Subjt:  FDYYWLVQQWPRAKCSLRPCNIP--VIPGYFTIHGLWPQQRNFPLLNC
Q40379 Ribonuclease S-62.7e-0540Show/hide
Query:  IANIFIVILLLLGAKEVVTFDYYWLVQQWPRAKCSLRPCNIPVIPGYFTIHGLWPQQRNFPLLNC
        + ++F++ L  L +     F+Y  LV QWP A C   PC    IP  FTIHGLWP   +  L  C
Subjt:  IANIFIVILLLLGAKEVVTFDYYWLVQQWPRAKCSLRPCNIPVIPGYFTIHGLWPQQRNFPLLNC
Q40381 Ribonuclease S-77.1e-0642.62Show/hide
Query:  IVILLLLGAKEVVTFDYYWLVQQWPRAKCSLRPCNIPVIPGYFTIHGLWPQQRNFPLLNCA
        + +LL + +     F+Y  LV QWP A C   PC    IP  FTIHGLWP   +  L  CA
Subjt:  IVILLLLGAKEVVTFDYYWLVQQWPRAKCSLRPCNIPVIPGYFTIHGLWPQQRNFPLLNCA
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCATAGCAAACATTTTCATAGTAATACTTCTGTTACTTGGAGCCAAGGAGGTAGTTACTTTTGATTATTATTGGCTTGTTCAACAATGGCCACGGGCCAAATG
CTCCTTAAGACCTTGTAATATACCAGTGATACCAGGCTATTTTACCATACACGGGTTGTGGCCTCAGCAAAGAAATTTCCCTTTGCTTAATTGCGCAGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATTTTTGTTTAGAGTTTACTTCTAGCACTTGCAACAATGGCTGCCATAGCAAACATTTTCATAGTAATACTTCTGTTACTTGGAGCCAAGGAGGTAGTTACTTTTGATTA
TTATTGGCTTGTTCAACAATGGCCACGGGCCAAATGCTCCTTAAGACCTTGTAATATACCAGTGATACCAGGCTATTTTACCATACACGGGTTGTGGCCTCAGCAAAGAA
ATTTCCCTTTGCTTAATTGCGCAGGTTAGACACATAATATATTCGTTGGATGTATTTTGGCCTGATTTAGAACATGGGAATAACCAAGTGTTTTGGGCTTATGAATGGAA
AAGACATGGTACTTGCTCATTACTCAACCAAGCCACATATTTTCAACACACACTTGATCTATTCCTCCGAGTTAACCTTATTAGTGCCTTGGAACAAGGTGGAGTATTTC
CTGATGGGAGGGTCAAATTTTGGTCCACTGTCCAATATACTCTTTTAACACGATTTGGAGTACACCCAATTCTTCGATGTAAACTAGGTTGGTTGACGGAGATTGTGATG
TGCTTTCATACCAACGGAGCTCTTATTAATTGCAATTATCCACTTTACAATACATGTCCACCTTATTTTGTATTTTGATTTCATAGCTACTATTAGATAATAGGTGTAGA
AAATAAGAAGTCAAGCTTGTATGTATATTTTGGATAGTTATACAAACTTGAATTCTACAACGTTTATTTCTTTGATTTAA
Protein sequenceShow/hide protein sequence
MAAIANIFIVILLLLGAKEVVTFDYYWLVQQWPRAKCSLRPCNIPVIPGYFTIHGLWPQQRNFPLLNCAG