; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0011011 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011011
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr12:20101578..20102596
RNA-Seq ExpressionPI0011011
SyntenyPI0011011
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036924.1 retrotransposon protein [Cucumis melo var. makuwa]3.8e-6558.26Show/hide
Query:  MTNADVIEDIDEGDSTYATTVG-----------------DNI--------QLESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMIL
        MT  D +ED DEGDSTYATT                   DN+         + +S+R P+H WTREEE  L+ECL+ELVS+G  K   GTFRPGYLA ++
Subjt:  MTNADVIEDIDEGDSTYATTVG-----------------DNI--------QLESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMIL

Query:  RMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETF
        RMM EKLPGC ++ TT IDCRIKTLKRTFQ+I+EM G  CSGFGWNDE KCI+ E ELF+NWV+SHP  KGLLNK FPYYDEL+YVF +DR  G+ AETF
Subjt:  RMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETF

Query:  ADVSSNVP-GGFEPFPGEDGHNMDISNMYS
        ADV SN P GG++ F   DG N D   +YS
Subjt:  ADVSSNVP-GGFEPFPGEDGHNMDISNMYS

KAA0038975.1 retrotransposon protein [Cucumis melo var. makuwa]8.8e-6265.92Show/hide
Query:  LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKC
        + +S+R P+H WTREEE  L+ECL+ELVS+G  K   GTFRPGYLA ++RMM EKLPGC ++ TT IDCRIKTLKRTFQ+I+EM G  CSGFGWNDE KC
Subjt:  LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKC

Query:  IIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVP-GGFEPFPGEDGHNMDISNMYS
        I+ E ELF+NWV+SHP  KGLLNK FPYYDEL+YVF +DR  G+ AETFADV SN P GG++ F   DG N D S +YS
Subjt:  IIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVP-GGFEPFPGEDGHNMDISNMYS

KAA0050293.1 retrotransposon protein [Cucumis melo var. makuwa]2.6e-6165.36Show/hide
Query:  LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKC
        + +S+R P+H WTREEE  L+ECL+ELVS+G  K   GTFRPGYLA ++RMM +KLPGC ++ TT IDCRIKTLKRTFQ+I+EM GL CSGFGWNDE KC
Subjt:  LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKC

Query:  IIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVPG-GFEPFPGEDGHNMDISNMYS
        I+ E ELF+NWV+SHP  KGLLNK FPYYDEL+YVF +DR  G+ AETFADV SN PG G++ F   DG N D   +YS
Subjt:  IIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVPG-GFEPFPGEDGHNMDISNMYS

KAA0061240.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-6159.42Show/hide
Query:  MTNADVIEDIDEGDSTYA-TTVGDNIQ-----------LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQ
        MT  D +ED+DEGDS YA TT  ++I            + +S+R P+H WT++EE  L+ECL+ELVS+G  K   GTF PG LA ++RMM +KLPGC ++
Subjt:  MTNADVIEDIDEGDSTYA-TTVGDNIQ-----------LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQ

Query:  GTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVPGGFEP
          T IDCRIKTLKRTFQ+I+EM G TCSGF WNDE  CIIVE ELF+NWV+ HP  KGLLNKLF YYDEL+YVF +DRTMG+ AETF D+ SN PGG+E 
Subjt:  GTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVPGGFEP

Query:  FPGEDGH
        F   DG+
Subjt:  FPGEDGH

XP_031742657.1 uncharacterized protein LOC116404426 [Cucumis sativus]8.8e-6264.61Show/hide
Query:  LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKC
        + SSSR PKH WT+EEE+ L+EC+V+LVS G  K   GTFRPGYLA +LRMM  KLPGC +  TT ID RIKTLKR++Q+I+EM G +CSGFGWND+ KC
Subjt:  LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKC

Query:  IIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVPGGFEPFPGEDGHNMDISNMYS
        II E E F+NWV+SHP  KGLLNK FPYYD+ +YVF KDR MG   ETFADV SNVP GFE FP  D ++M+I +M S
Subjt:  IIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVPGGFEPFPGEDGHNMDISNMYS

TrEMBL top hitse value%identityAlignment
A0A5A7T091 Retrotransposon protein1.8e-6558.26Show/hide
Query:  MTNADVIEDIDEGDSTYATTVG-----------------DNI--------QLESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMIL
        MT  D +ED DEGDSTYATT                   DN+         + +S+R P+H WTREEE  L+ECL+ELVS+G  K   GTFRPGYLA ++
Subjt:  MTNADVIEDIDEGDSTYATTVG-----------------DNI--------QLESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMIL

Query:  RMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETF
        RMM EKLPGC ++ TT IDCRIKTLKRTFQ+I+EM G  CSGFGWNDE KCI+ E ELF+NWV+SHP  KGLLNK FPYYDEL+YVF +DR  G+ AETF
Subjt:  RMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETF

Query:  ADVSSNVP-GGFEPFPGEDGHNMDISNMYS
        ADV SN P GG++ F   DG N D   +YS
Subjt:  ADVSSNVP-GGFEPFPGEDGHNMDISNMYS

A0A5A7TC56 Retrotransposon protein4.2e-6265.92Show/hide
Query:  LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKC
        + +S+R P+H WTREEE  L+ECL+ELVS+G  K   GTFRPGYLA ++RMM EKLPGC ++ TT IDCRIKTLKRTFQ+I+EM G  CSGFGWNDE KC
Subjt:  LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKC

Query:  IIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVP-GGFEPFPGEDGHNMDISNMYS
        I+ E ELF+NWV+SHP  KGLLNK FPYYDEL+YVF +DR  G+ AETFADV SN P GG++ F   DG N D S +YS
Subjt:  IIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVP-GGFEPFPGEDGHNMDISNMYS

A0A5A7U308 Retrotransposon protein1.2e-6165.36Show/hide
Query:  LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKC
        + +S+R P+H WTREEE  L+ECL+ELVS+G  K   GTFRPGYLA ++RMM +KLPGC ++ TT IDCRIKTLKRTFQ+I+EM GL CSGFGWNDE KC
Subjt:  LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKC

Query:  IIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVPG-GFEPFPGEDGHNMDISNMYS
        I+ E ELF+NWV+SHP  KGLLNK FPYYDEL+YVF +DR  G+ AETFADV SN PG G++ F   DG N D   +YS
Subjt:  IIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVPG-GFEPFPGEDGHNMDISNMYS

A0A5D3BLT9 Retrotransposon protein9.5e-6259.42Show/hide
Query:  MTNADVIEDIDEGDSTYA-TTVGDNIQ-----------LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQ
        MT  D +ED+DEGDS YA TT  ++I            + +S+R P+H WT++EE  L+ECL+ELVS+G  K   GTF PG LA ++RMM +KLPGC ++
Subjt:  MTNADVIEDIDEGDSTYA-TTVGDNIQ-----------LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQ

Query:  GTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVPGGFEP
          T IDCRIKTLKRTFQ+I+EM G TCSGF WNDE  CIIVE ELF+NWV+ HP  KGLLNKLF YYDEL+YVF +DRTMG+ AETF D+ SN PGG+E 
Subjt:  GTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVPGGFEP

Query:  FPGEDGH
        F   DG+
Subjt:  FPGEDGH

A0A5D3CWL2 Retrotransposon protein1.6e-6165.36Show/hide
Query:  LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKC
        + +S+R P+H WTREEE  L+ECL+ELVS+G  K   GTFRPGYLA ++RMM EKLPGC ++ TT IDCRIKTLKRTFQ+I+EM G  CSGFGWNDE KC
Subjt:  LESSSRTPKHSWTREEESILMECLVELVSVGD-KPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKC

Query:  IIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVP-GGFEPFPGEDGHNMDISNMYS
        I+ E ELF+NWV+SHP  KGLLNK FPYYDEL+YVF +DR  G+ AETFADV SN P GG++ F   DG N D   +YS
Subjt:  IIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVP-GGFEPFPGEDGHNMDISNMYS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein1.7e-0725Show/hide
Query:  PKHSWTREEESILMECLVELVSVGDKPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKCIIVENELF
        P + WT +E  +    L+EL+    +   G      +   L     K  GC  +       R+K LK  +QS  ++   + SGFGW+ E K     +E++
Subjt:  PKHSWTREEESILMECLVELVSVGDKPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGWNDEVKCIIVENELF

Query:  ENWVKSHPTTKGLLNKLFPYYDELSYVF
         +++K+HP  K +  +   ++++L  +F
Subjt:  ENWVKSHPTTKGLLNKLFPYYDELSYVF

AT2G24960.2 unknown protein2.5e-0620.79Show/hide
Query:  DSTYATTVGDNIQLESSSRTPKHSWTREEESILMECLVELVSVGDKPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLT
        D + A T       E +S   +  WT   +  L++ LVE V+ G++         +  M+     +     +      +  R K L+R +  I  +  L 
Subjt:  DSTYATTVGDNIQLESSSRTPKHSWTREEESILMECLVELVSVGDKPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLT

Query:  CSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVPGGFEPFPGE
         +GF W+     +I +++++  ++++HP  +    K  P Y  L ++F K+ + G+         + +   F+P P E
Subjt:  CSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVPGGFEPFPGE

AT4G02210.1 unknown protein1.6e-0528.57Show/hide
Query:  RIKTLKRTFQSISEMLGLTCSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDEL
        R K+L+R F +I  +  L   GF W++E + +  +N ++++++K+H   +  + +  PYY +L
Subjt:  RIKTLKRTFQSISEMLGLTCSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDEL

AT4G02210.2 unknown protein1.6e-0528.57Show/hide
Query:  RIKTLKRTFQSISEMLGLTCSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDEL
        R K+L+R F +I  +  L   GF W++E + +  +N ++++++K+H   +  + +  PYY +L
Subjt:  RIKTLKRTFQSISEMLGLTCSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDEL

AT5G27260.1 unknown protein1.4e-0926.75Show/hide
Query:  VGDNIQLESSSRTPKHSWTREEESILMECLVELVSVGDKPPYGTFRPGYLAMILRMMTE-KLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGW
        +GD+ Q +   +   + W+ EE  +L++ LVE ++   +   GT     L +  + M E     C  +       R+K LK  +QS  ++   + SGFGW
Subjt:  VGDNIQLESSSRTPKHSWTREEESILMECLVELVSVGDKPPYGTFRPGYLAMILRMMTE-KLPGCTIQGTTTIDCRIKTLKRTFQSISEMLGLTCSGFGW

Query:  NDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFAD
        +   K     +E++ +++K+HP  K L    F ++DEL  +F +    G+ A    D
Subjt:  NDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACGCCGACGTAATAGAGGACATCGATGAAGGTGACTCAACATACGCAACCACTGTAGGTGACAACATTCAGTTGGAAAGTTCGTCGAGGACCCCGAAACATTC
ATGGACCAGAGAAGAAGAGTCCATCCTCATGGAATGTCTAGTGGAGTTGGTCTCCGTCGGGGATAAACCCCCCTACGGCACCTTTAGACCCGGTTACTTGGCAATGATAC
TGAGAATGATGACGGAAAAGCTCCCAGGGTGTACCATCCAGGGGACCACTACTATTGACTGTCGGATCAAGACGCTTAAGAGAACCTTTCAGTCCATATCAGAGATGTTG
GGCCTTACCTGCAGTGGATTCGGTTGGAATGATGAGGTGAAATGCATAATTGTCGAGAATGAGTTGTTCGAGAATTGGGTGAAGAGTCATCCGACAACAAAGGGTCTTTT
GAACAAGTTGTTTCCATACTACGACGAACTGTCCTATGTCTTCAGGAAAGATCGCACTATGGGACAACGCGCTGAGACATTTGCGGATGTCAGTTCGAATGTGCCAGGCG
GTTTTGAGCCATTTCCAGGTGAAGATGGACACAATATGGACATCTCAAACATGTACAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAACGCCGACGTAATAGAGGACATCGATGAAGGTGACTCAACATACGCAACCACTGTAGGTGACAACATTCAGTTGGAAAGTTCGTCGAGGACCCCGAAACATTC
ATGGACCAGAGAAGAAGAGTCCATCCTCATGGAATGTCTAGTGGAGTTGGTCTCCGTCGGGGATAAACCCCCCTACGGCACCTTTAGACCCGGTTACTTGGCAATGATAC
TGAGAATGATGACGGAAAAGCTCCCAGGGTGTACCATCCAGGGGACCACTACTATTGACTGTCGGATCAAGACGCTTAAGAGAACCTTTCAGTCCATATCAGAGATGTTG
GGCCTTACCTGCAGTGGATTCGGTTGGAATGATGAGGTGAAATGCATAATTGTCGAGAATGAGTTGTTCGAGAATTGGGTGAAGAGTCATCCGACAACAAAGGGTCTTTT
GAACAAGTTGTTTCCATACTACGACGAACTGTCCTATGTCTTCAGGAAAGATCGCACTATGGGACAACGCGCTGAGACATTTGCGGATGTCAGTTCGAATGTGCCAGGCG
GTTTTGAGCCATTTCCAGGTGAAGATGGACACAATATGGACATCTCAAACATGTACAGCTAG
Protein sequenceShow/hide protein sequence
MTNADVIEDIDEGDSTYATTVGDNIQLESSSRTPKHSWTREEESILMECLVELVSVGDKPPYGTFRPGYLAMILRMMTEKLPGCTIQGTTTIDCRIKTLKRTFQSISEML
GLTCSGFGWNDEVKCIIVENELFENWVKSHPTTKGLLNKLFPYYDELSYVFRKDRTMGQRAETFADVSSNVPGGFEPFPGEDGHNMDISNMYS