CuGenDBv2

Gene ID	PI0011017
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	PMD domain-containing protein
Genome location	chr10:24515..25213
RNA-Seq Expression	PI0011017
Synteny	PI0011017
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ADN34118.1 hypothetical protein [Cucumis melo subsp. melo]

4.0e-111

81.47

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Query:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI
        MHYVHGWLAHYF THYPLP EVRG KM+NFSGEGGSIYFGEYEARELIHNGARIQWHA+LQNR+KHERM D HDSSFLQ SYF+SMRSCYLSSRC NTWI
Subjt:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI

Query:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL
        ITSYSPYR GRQFGFYQD+PNDIGG+ P  T  N LYHWRICTRR TL ELYLP RSLEP KHVT RF +WW TKH TYF+DNRHHLVSSAI P SQP+L
Subjt:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL

Query:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE
        PKNRGSN+GGK+I L+EAMAP  + EVKEH++
Subjt:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE

KAA0025356.1 hypothetical protein E6C27_scaffold1204G00400 [Cucumis melo var. makuwa]

6.8e-111

81.03

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Query:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI
        MHYVHGWLAHYF THYPLP EVRG KM+NFSGEGGSIYFGEYEARELIHNGARIQWHA+LQNR+KHERM D HDSSFLQ SY +SM SCYLSSRC NTWI
Subjt:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI

Query:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL
        ITSYSPY+F RQFGFYQD+PNDIGG+ P  T  N LYHWRICTRR TLSELYLPARSLEP KHVT RF +WW TKHGTYF+DNRHHLVSSAIPP SQ +L
Subjt:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL

Query:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE
        PKNRG N+GGK+I L+EAMAP  + EVKEH++
Subjt:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]

1.6e-115

84.05

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Query:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI
        MHYVHGWLAHYF THYPLP EVRG KM+NFS EGGSIYFGEYEARELIHNGARIQWHASLQNR+KHERM D HDSSFLQ+SYF+SMRSCYLSSRC NTWI
Subjt:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI

Query:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL
        ITSYSPYRFGRQFGFYQD+PNDIGG+SP  T  N LYHWRICTRR TLSELYLPARSLEP KHVT RF +WW TKHGTYF+DNRHHLVSSAIPPSSQP+L
Subjt:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL

Query:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE
        PKNRGSN+GGK+I L+EAMAP  + EVKE ++
Subjt:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]

5.2e-111

81.74

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Query:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI
        MHYVHGWLAHYF THYPLP EVRG KM+NFSGEGGSIYFGEYEARELIHNG RIQWHA+L NRNKHERM D HDSSFLQ SYF+SMRSCYLSSRC NTWI
Subjt:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI

Query:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL
        ITSYSPYRFGRQFGFYQD+PNDIGG+ P  T  N LYHWRIC RR TLSELYLP RSLEP KHVT RF +WW TKH  YF+DNRHHLVSSAIPP SQP+L
Subjt:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL

Query:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEH
        PKNRGSN+GGK+I L+EAMAP  + EV EH
Subjt:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEH

TYK06433.1 hypothetical protein E5676_scaffold163G001360 [Cucumis melo var. makuwa]

9.9e-110

80.6

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Query:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI
        MHYVHGWLAHYF THYPLP EVRG KM+NFSG+G SIYFGEYEARELIHNGARIQWHA+LQNR+KHERM D HDSSFLQ SYF+SMRSCYLSSRC NTWI
Subjt:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI

Query:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL
        ITSYSPYRFGRQFGFYQD+PNDIGG+ P  T  N LYHWRICTRR TL ELYL  RSLEP KHVT RF +WW TKH TYF+DNRHHLVSSAI P SQP+L
Subjt:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL

Query:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE
        PKNRGSN+GGK+I L+EAMAP  + EVKEH++
Subjt:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SHN8 PMD domain-containing protein

3.3e-111

81.03

Show/hide

Query:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI
        MHYVHGWLAHYF THYPLP EVRG KM+NFSGEGGSIYFGEYEARELIHNGARIQWHA+LQNR+KHERM D HDSSFLQ SY +SM SCYLSSRC NTWI
Subjt:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI

Query:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL
        ITSYSPY+F RQFGFYQD+PNDIGG+ P  T  N LYHWRICTRR TLSELYLPARSLEP KHVT RF +WW TKHGTYF+DNRHHLVSSAIPP SQ +L
Subjt:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL

Query:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE
        PKNRG N+GGK+I L+EAMAP  + EVKEH++
Subjt:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE

A0A5A7TX42 Uncharacterized protein

7.6e-116

84.05

Show/hide

Query:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI
        MHYVHGWLAHYF THYPLP EVRG KM+NFS EGGSIYFGEYEARELIHNGARIQWHASLQNR+KHERM D HDSSFLQ+SYF+SMRSCYLSSRC NTWI
Subjt:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI

Query:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL
        ITSYSPYRFGRQFGFYQD+PNDIGG+SP  T  N LYHWRICTRR TLSELYLPARSLEP KHVT RF +WW TKHGTYF+DNRHHLVSSAIPPSSQP+L
Subjt:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL

Query:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE
        PKNRGSN+GGK+I L+EAMAP  + EVKE ++
Subjt:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE

A0A5A7UGW6 PMD domain-containing protein

2.5e-111

81.74

Show/hide

Query:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI
        MHYVHGWLAHYF THYPLP EVRG KM+NFSGEGGSIYFGEYEARELIHNG RIQWHA+L NRNKHERM D HDSSFLQ SYF+SMRSCYLSSRC NTWI
Subjt:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI

Query:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL
        ITSYSPYRFGRQFGFYQD+PNDIGG+ P  T  N LYHWRIC RR TLSELYLP RSLEP KHVT RF +WW TKH  YF+DNRHHLVSSAIPP SQP+L
Subjt:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL

Query:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEH
        PKNRGSN+GGK+I L+EAMAP  + EV EH
Subjt:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEH

A0A5D3C3D7 PMD domain-containing protein

4.8e-110

80.6

Show/hide

Query:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI
        MHYVHGWLAHYF THYPLP EVRG KM+NFSG+G SIYFGEYEARELIHNGARIQWHA+LQNR+KHERM D HDSSFLQ SYF+SMRSCYLSSRC NTWI
Subjt:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI

Query:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL
        ITSYSPYRFGRQFGFYQD+PNDIGG+ P  T  N LYHWRICTRR TL ELYL  RSLEP KHVT RF +WW TKH TYF+DNRHHLVSSAI P SQP+L
Subjt:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL

Query:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE
        PKNRGSN+GGK+I L+EAMAP  + EVKEH++
Subjt:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE

E5GCB9 PMD domain-containing protein

1.9e-111

81.47

Show/hide

Query:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI
        MHYVHGWLAHYF THYPLP EVRG KM+NFSGEGGSIYFGEYEARELIHNGARIQWHA+LQNR+KHERM D HDSSFLQ SYF+SMRSCYLSSRC NTWI
Subjt:  MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWI

Query:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL
        ITSYSPYR GRQFGFYQD+PNDIGG+ P  T  N LYHWRICTRR TL ELYLP RSLEP KHVT RF +WW TKH TYF+DNRHHLVSSAI P SQP+L
Subjt:  ITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKL

Query:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE
        PKNRGSN+GGK+I L+EAMAP  + EVKEH++
Subjt:  PKNRGSNVGGKQIHLIEAMAPTHDREVKEHRE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G18510.1 Aminotransferase-like, plant mobile domain family protein

1.2e-04

29.59

Show/hide

Query:  FISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYF
        F S   C   S       +  Y PYR  RQFG  QD+P  +     + T ++A   W   +       LYLP++      +VT R+++WW      YF
Subjt:  FISMRSCYLSSRCGNTWIITSYSPYRFGRQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCATTACGTCCATGGCTGGTTGGCCCATTATTTTAACACACATTACCCACTTCCAGCCGAAGTTCGAGGTTCCAAGATGTCCAACTTTTCTGGTGAAGGTGGGTCTAT
TTATTTTGGAGAATATGAGGCGCGAGAACTGATCCACAACGGTGCAAGAATTCAATGGCACGCAAGCCTTCAGAACCGAAATAAACATGAACGCATGTCCGATGCTCATG
ATTCATCTTTTCTGCAGTCTTCCTATTTTATAAGTATGCGGTCATGCTACTTATCATCTCGTTGTGGAAATACTTGGATCATAACATCATATAGTCCATATCGGTTTGGG
CGGCAGTTTGGCTTTTACCAAGATATCCCTAACGATATAGGGGGTATATCACCTGAAACCACGCCGAGGAATGCATTATATCATTGGAGGATATGTACGAGGCGCGGAAC
CTTATCTGAGTTATATTTGCCTGCCCGTTCATTAGAGCCTAGCAAGCATGTGACACCACGATTCAAAAATTGGTGGGCCACGAAGCATGGGACCTATTTTAAGGATAATA
GACACCATTTGGTGAGCAGTGCCATTCCTCCCTCGTCACAACCCAAATTACCAAAGAATCGAGGAAGCAATGTGGGTGGAAAACAGATCCACTTGATTGAGGCAATGGCT
CCTACCCACGATAGAGAGGTCAAGGAACACAGAGAGTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MHYVHGWLAHYFNTHYPLPAEVRGSKMSNFSGEGGSIYFGEYEARELIHNGARIQWHASLQNRNKHERMSDAHDSSFLQSSYFISMRSCYLSSRCGNTWIITSYSPYRFG
RQFGFYQDIPNDIGGISPETTPRNALYHWRICTRRGTLSELYLPARSLEPSKHVTPRFKNWWATKHGTYFKDNRHHLVSSAIPPSSQPKLPKNRGSNVGGKQIHLIEAMA
PTHDREVKEHRE

PI0011017 (gene) of Melon (PI 482460) v1 genome