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PI0011073 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011073
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSynaptotagmin-2
Genome locationchr02:5932706..5936405
RNA-Seq ExpressionPI0011073
SyntenyPI0011073
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0009306 - protein secretion (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008289 - lipid binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR045050 - Synaptotagmin, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TQE07571.1 hypothetical protein C1H46_006891 [Malus baccata]5.4e-1575.41Show/hide
Query:  MLSDSAPDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        +++D  P VDFGLKLLGADAM+IP LYRFVQE IK+QVANMYLWPKA LEV IMDPT  +R
Subjt:  MLSDSAPDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

XP_003550429.1 synaptotagmin-2 isoform X1 [Glycine max]1.2e-1483.64Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        P VDFGLKLLGADAMSIP LYR VQE IKDQVANMYLWPKA LEV IMDPTK ++
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

XP_008221239.1 PREDICTED: synaptotagmin-2 [Prunus mume]7.1e-1585.45Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        P VDFGLKLLGADAMSIP LYRFVQE IKDQVANMYLWPKA LEV IMDPT  +R
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

XP_010110006.1 synaptotagmin-2 [Morus notabilis]9.3e-1583.64Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        P VDFGLKLLGADAMSIP LYRFVQE IKDQVANMYLWPKA LEV IMDP K ++
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

XP_042989167.1 synaptotagmin-2 isoform X1 [Carya illinoinensis]1.2e-1483.64Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        P VDFGLKLLGADAMSIP LYRFVQE IKDQVANMYLWPKA LEV IMDP K ++
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

TrEMBL top hitse value%identityAlignment
A0A445GC90 Synaptotagmin-25.9e-1583.64Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        P VDFGLKLLGADAMSIP LYR VQE IKDQVANMYLWPKA LEV IMDPTK ++
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

A0A540N943 Uncharacterized protein2.6e-1575.41Show/hide
Query:  MLSDSAPDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        +++D  P VDFGLKLLGADAM+IP LYRFVQE IK+QVANMYLWPKA LEV IMDPT  +R
Subjt:  MLSDSAPDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

A0A5N6R8K4 Uncharacterized protein5.9e-1583.64Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        P VDFGLKLLGADAMSIP LYRFVQE IKDQVANMYLWPKA LEV IMDP K ++
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

I1MY41 Uncharacterized protein5.9e-1583.64Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        P VDFGLKLLGADAMSIP LYR VQE IKDQVANMYLWPKA LEV IMDPTK ++
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

W9SSW6 Extended synaptotagmin-34.5e-1583.64Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        P VDFGLKLLGADAMSIP LYRFVQE IKDQVANMYLWPKA LEV IMDP K ++
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

SwissProt top hitse value%identityAlignment
B6ETT4 Synaptotagmin-25.1e-1676.36Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        P VDFGLKLLGAD M+IP LYRFVQE IKDQVANMYLWPK  L V IMDP+K ++
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

Q7XA06 Synaptotagmin-32.5e-1065.31Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMD
        P VDFGLK+LG D MSIP LYR+VQE IK QV++MY WP+ +LE+ I+D
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMD

Q9SKR2 Synaptotagmin-15.6e-1576.36Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        P VDFGLKL GAD MSIP LYRFVQE IKDQVANMYLWPK L+ V I+DP K  R
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

Arabidopsis top hitse value%identityAlignment
AT1G20080.1 Calcium-dependent lipid-binding (CaLB domain) family protein3.6e-1776.36Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        P VDFGLKLLGAD M+IP LYRFVQE IKDQVANMYLWPK  L V IMDP+K ++
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

AT2G20990.1 synaptotagmin A4.0e-1676.36Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        P VDFGLKL GAD MSIP LYRFVQE IKDQVANMYLWPK L+ V I+DP K  R
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

AT2G20990.2 synaptotagmin A4.0e-1676.36Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR
        P VDFGLKL GAD MSIP LYRFVQE IKDQVANMYLWPK L+ V I+DP K  R
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVR

AT2G20990.3 synaptotagmin A1.9e-1045.16Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQ--------------------------------------EPIKDQVANMYLWPKALLEVLIMDPTKYVR
        P VDFGLKL GAD MSIP LYRFVQ                                      E IKDQVANMYLWPK L+ V I+DP K  R
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQ--------------------------------------EPIKDQVANMYLWPKALLEVLIMDPTKYVR

AT5G04220.2 Calcium-dependent lipid-binding (CaLB domain) family protein1.7e-1165.31Show/hide
Query:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMD
        P VDFGLK+LG D MSIP LYR+VQE IK QV++MY WP+ +LE+ I+D
Subjt:  PDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCTGACTCTGCACCCGATGTCGATTTTGGACTGAAATTGCTCGGTGCAGATGCAATGTCCATCCCAGAGCTGTATAGGTTTGTTCAGGAACCAATAAAAGATCA
AGTTGCCAATATGTATCTATGGCCCAAGGCCCTACTTGAAGTACTGATAATGGACCCTACGAAGTATGTGAGATTCATCAATGCAAGCTATGAAAGTGTTGGAGGCCATT
GTTGGAAGGAAGATGTGGATGTCGTGCTGAAGCAACAACTAATGGTTGCCAAGAGCCCCCTCCCCGAAAACTCATCTTCTTTGTCCTCCAGCCCTAGCGCTGCCCAGCCC
CGTGCCGCCCGGAGTTCGTTCTACCTACTCGTGCCGTCAGAGCTCGTCTCGCCTACCTGTGCCGCCTGGACTTCGTTCGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCTGACTCTGCACCCGATGTCGATTTTGGACTGAAATTGCTCGGTGCAGATGCAATGTCCATCCCAGAGCTGTATAGGTTTGTTCAGGAACCAATAAAAGATCA
AGTTGCCAATATGTATCTATGGCCCAAGGCCCTACTTGAAGTACTGATAATGGACCCTACGAAGTATGTGAGATTCATCAATGCAAGCTATGAAAGTGTTGGAGGCCATT
GTTGGAAGGAAGATGTGGATGTCGTGCTGAAGCAACAACTAATGGTTGCCAAGAGCCCCCTCCCCGAAAACTCATCTTCTTTGTCCTCCAGCCCTAGCGCTGCCCAGCCC
CGTGCCGCCCGGAGTTCGTTCTACCTACTCGTGCCGTCAGAGCTCGTCTCGCCTACCTGTGCCGCCTGGACTTCGTTCGTGTAG
Protein sequenceShow/hide protein sequence
MLSDSAPDVDFGLKLLGADAMSIPELYRFVQEPIKDQVANMYLWPKALLEVLIMDPTKYVRFINASYESVGGHCWKEDVDVVLKQQLMVAKSPLPENSSSLSSSPSAAQP
RAARSSFYLLVPSELVSPTCAAWTSFV