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PI0011089 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011089
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr07:16933339..16933791
RNA-Seq ExpressionPI0011089
SyntenyPI0011089
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]4.5e-5575.33Show/hide
Query:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ ++RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMF Q S QI+H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
        NVAE NG VIDE SQVSFILESLP+SF QFRSNAVMNKI YT+T LLNEL
Subjt:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]4.5e-5575.33Show/hide
Query:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ ++RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMF Q S QI+H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
        NVAE NG VIDE SQVSFILESLP+SF QFRSNAVMNKI YT+T LLNEL
Subjt:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]4.5e-5575.33Show/hide
Query:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ ++RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMF Q S QI+H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
        NVAE NG VIDE SQVSFILESLP+SF QFRSNAVMNKI YT+T LLNEL
Subjt:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]4.5e-5575.33Show/hide
Query:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ ++RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMF Q S QI+H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
        NVAE NG VIDE SQVSFILESLP+SF QFRSNAVMNKI YT+T LLNEL
Subjt:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]4.5e-5575.33Show/hide
Query:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ ++RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMF Q S QI+H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
        NVAE NG VIDE SQVSFILESLP+SF QFRSNAVMNKI YT+T LLNEL
Subjt:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein2.2e-5575.33Show/hide
Query:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ ++RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMF Q S QI+H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
        NVAE NG VIDE SQVSFILESLP+SF QFRSNAVMNKI YT+T LLNEL
Subjt:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
A0A5A7TU93 Gag/pol protein2.2e-5575.33Show/hide
Query:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ ++RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMF Q S QI+H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
        NVAE NG VIDE SQVSFILESLP+SF QFRSNAVMNKI YT+T LLNEL
Subjt:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
A0A5A7TWB9 Gag/pol protein2.2e-5575.33Show/hide
Query:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ ++RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMF Q S QI+H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
        NVAE NG VIDE SQVSFILESLP+SF QFRSNAVMNKI YT+T LLNEL
Subjt:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
A0A5D3CPJ6 Gag/pol protein2.2e-5575.33Show/hide
Query:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ ++RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMF Q S QI+H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
        NVAE NG VIDE SQVSFILESLP+SF QFRSNAVMNKI YT+T LLNEL
Subjt:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
A0A5D3CSZ6 Gag/pol protein2.2e-5575.33Show/hide
Query:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF
        +EECP  P  NA++TVR+ ++RW KANEKAR YILAS+S+VL+KKHESM+TAR+IMDSLQEMF Q S QI+H+A+KY+YNARM EG SVREHVL+MMV F
Subjt:  MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQF

Query:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
        NVAE NG VIDE SQVSFILESLP+SF QFRSNAVMNKI YT+T LLNEL
Subjt:  NVAETNGTVIDEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAATGTCCTCCTTCCCCTGTTCGAAATGCATCCAAAACCGTCAGGGATGCACATGACCGCTGGACAAAGGCCAATGAAAAGGCCCGAGTCTACATCTTGGCCAG
TATGTCTGACGTACTGAGCAAGAAACATGAATCCATGGTCACTGCACGTCAGATCATGGACTCTCTCCAGGAGATGTTTAGACAACCGTCCATTCAAATCCGACACGAGG
CTATTAAATACGTTTATAATGCCCGTATGAAGGAAGGCCAATCTGTTAGAGAACATGTTCTCGACATGATGGTCCAATTCAACGTGGCAGAAACGAACGGGACAGTCATT
GACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTCTTCCGAAGAGCTTCTTTCAATTCCGTAGCAATGCGGTTATGAACAAGATAAAATATACCATGACTAACCTCCT
TAACGAGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAATGTCCTCCTTCCCCTGTTCGAAATGCATCCAAAACCGTCAGGGATGCACATGACCGCTGGACAAAGGCCAATGAAAAGGCCCGAGTCTACATCTTGGCCAG
TATGTCTGACGTACTGAGCAAGAAACATGAATCCATGGTCACTGCACGTCAGATCATGGACTCTCTCCAGGAGATGTTTAGACAACCGTCCATTCAAATCCGACACGAGG
CTATTAAATACGTTTATAATGCCCGTATGAAGGAAGGCCAATCTGTTAGAGAACATGTTCTCGACATGATGGTCCAATTCAACGTGGCAGAAACGAACGGGACAGTCATT
GACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTCTTCCGAAGAGCTTCTTTCAATTCCGTAGCAATGCGGTTATGAACAAGATAAAATATACCATGACTAACCTCCT
TAACGAGTTGTAG
Protein sequenceShow/hide protein sequence
MEECPPSPVRNASKTVRDAHDRWTKANEKARVYILASMSDVLSKKHESMVTARQIMDSLQEMFRQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVI
DEQSQVSFILESLPKSFFQFRSNAVMNKIKYTMTNLLNEL