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PI0011102 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011102
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionmediator of RNA polymerase II transcription subunit 22b-like
Genome locationchr05:5772697..5774928
RNA-Seq ExpressionPI0011102
SyntenyPI0011102
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR009332 - Mediator of RNA polymerase II transcription subunit 22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145443.1 mediator of RNA polymerase II transcription subunit 22b [Cucumis sativus]1.3e-6795.95Show/hide
Query:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
        MNKGIGGGTGPTAAAA AAAQKQK+LLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
Subjt:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH

Query:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQKT
        VEQRIVEFNQQAQQTDRLLSRIGEEAA++LKELESHYYSSTQRTDQ +
Subjt:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQKT

XP_008459037.1 PREDICTED: mediator of RNA polymerase II transcription subunit 22a-like isoform X1 [Cucumis melo]3.9e-6796.58Show/hide
Query:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
        MNKGIGGGTGPTAAAA AAAQKQK+LLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
Subjt:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH

Query:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ
        VEQRIVEFNQQAQQT+RLLSRIGEEAA++LKELESHYYSSTQRTDQ
Subjt:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ

XP_008459039.1 PREDICTED: mediator of RNA polymerase II transcription subunit 22b-like isoform X2 [Cucumis melo]3.9e-6796.58Show/hide
Query:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
        MNKGIGGGTGPTAAAA AAAQKQK+LLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
Subjt:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH

Query:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ
        VEQRIVEFNQQAQQT+RLLSRIGEEAA++LKELESHYYSSTQRTDQ
Subjt:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ

XP_022155216.1 mediator of RNA polymerase II transcription subunit 22b-like [Momordica charantia]4.3e-6695.21Show/hide
Query:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
        MNKG+GGG GPTAAAA AAAQKQK+LLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
Subjt:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH

Query:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ
        VEQRIVEFNQQA+QTDRLLSRIGEEAA+SLKELESHYYSSTQRT Q
Subjt:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ

XP_038891249.1 mediator of RNA polymerase II transcription subunit 22b-like [Benincasa hispida]7.3e-6695.89Show/hide
Query:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
        MNKGIGGG GPTAAAA AAAQKQK+LLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
Subjt:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH

Query:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ
        VEQRIVEFNQQAQQTDRLLS IGEEAA+SLKELESHYYSSTQRT Q
Subjt:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ

TrEMBL top hitse value%identityAlignment
A0A0A0M174 Uncharacterized protein6.4e-6895.95Show/hide
Query:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
        MNKGIGGGTGPTAAAA AAAQKQK+LLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
Subjt:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH

Query:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQKT
        VEQRIVEFNQQAQQTDRLLSRIGEEAA++LKELESHYYSSTQRTDQ +
Subjt:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQKT

A0A1S3C993 mediator of RNA polymerase II transcription subunit 22b-like isoform X21.9e-6796.58Show/hide
Query:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
        MNKGIGGGTGPTAAAA AAAQKQK+LLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
Subjt:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH

Query:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ
        VEQRIVEFNQQAQQT+RLLSRIGEEAA++LKELESHYYSSTQRTDQ
Subjt:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ

A0A1S3CAG5 mediator of RNA polymerase II transcription subunit 22a-like isoform X11.9e-6796.58Show/hide
Query:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
        MNKGIGGGTGPTAAAA AAAQKQK+LLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
Subjt:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH

Query:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ
        VEQRIVEFNQQAQQT+RLLSRIGEEAA++LKELESHYYSSTQRTDQ
Subjt:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ

A0A5A7TMC4 Mediator of RNA polymerase II transcription subunit 22a-like isoform X11.9e-6796.58Show/hide
Query:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
        MNKGIGGGTGPTAAAA AAAQKQK+LLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
Subjt:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH

Query:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ
        VEQRIVEFNQQAQQT+RLLSRIGEEAA++LKELESHYYSSTQRTDQ
Subjt:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ

A0A6J1DR20 mediator of RNA polymerase II transcription subunit 22b-like2.1e-6695.21Show/hide
Query:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
        MNKG+GGG GPTAAAA AAAQKQK+LLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
Subjt:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH

Query:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ
        VEQRIVEFNQQA+QTDRLLSRIGEEAA+SLKELESHYYSSTQRT Q
Subjt:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQ

SwissProt top hitse value%identityAlignment
A0JPN6 Mediator of RNA polymerase II transcription subunit 221.0e-1435.77Show/hide
Query:  AAATAAAQKQKMLLQ----RVETDIANIVDNFTHLVNVSRVNDP-----PVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQR
        A   A  Q ++ LLQ    R++ DI +I+DNFT ++  +++ D        +  Q+++ M +RAA +V+A +SL+KLVS+LKQ  I + F S+N+ ++QR
Subjt:  AAATAAAQKQKMLLQ----RVETDIANIVDNFTHLVNVSRVNDP-----PVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQR

Query:  IVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSST
          +     ++ DR L  + +E +  L ELE  YYSS+
Subjt:  IVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSST

Q54XB0 Putative mediator of RNA polymerase II transcription subunit 224.7e-1530.77Show/hide
Query:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH
        MN G G  + P         + Q+   +++++ I  +++N+ +++ +S+VND P++N+ E + ME R + M+ A + LLK++ ELKQ  I + F+++ + 
Subjt:  MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDH

Query:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQR
        V  + + F+++ ++T++ +  I EE + SLKELE  YY+S+ +
Subjt:  VEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQR

Q62276 Mediator of RNA polymerase II transcription subunit 221.0e-1435.77Show/hide
Query:  AAATAAAQKQKMLLQ----RVETDIANIVDNFTHLVNVSRVNDP-----PVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQR
        A   A  Q ++ LLQ    R++ DI +I+DNFT ++  +++ D        +  Q+++ M +RAA +V+A +SL+KLVS+LKQ  I + F S+N+ ++QR
Subjt:  AAATAAAQKQKMLLQ----RVETDIANIVDNFTHLVNVSRVNDP-----PVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQR

Query:  IVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSST
          +     ++ DR L  + +E +  L ELE  YYSS+
Subjt:  IVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSST

Q8LCH5 Mediator of RNA polymerase II transcription subunit 22b1.0e-5479.29Show/hide
Query:  GIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQ
        G GGG+GPTAAAA AA QKQK LLQRVETDI ++VDNFT +VNVSRV+DPPV+NSQE++MMEMRA+RMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQ
Subjt:  GIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQ

Query:  RIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQR
        RI EF+Q+A++T+RLL+RI ++A+++LKELESHYYSS QR
Subjt:  RIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQR

Q9SA42 Mediator of RNA polymerase II transcription subunit 22a8.7e-5475.34Show/hide
Query:  MNK--GIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLN
        MNK  G GGG+GPTAAAA AA QKQK LLQRV+TDI ++VDNF  +VNV+RV+DPP++NSQE++MMEMRA+R+VQAADSLLKLVSELKQTAIFSGFASLN
Subjt:  MNK--GIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLN

Query:  DHVEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRT
        DHVEQRI EF+Q+A++T+RLL+RI ++A++SLKELESHYYSS QR+
Subjt:  DHVEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRT

Arabidopsis top hitse value%identityAlignment
AT1G07950.1 Surfeit locus protein 5 subunit 22 of Mediator complex7.3e-5679.29Show/hide
Query:  GIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQ
        G GGG+GPTAAAA AA QKQK LLQRVETDI ++VDNFT +VNVSRV+DPPV+NSQE++MMEMRA+RMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQ
Subjt:  GIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQ

Query:  RIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQR
        RI EF+Q+A++T+RLL+RI ++A+++LKELESHYYSS QR
Subjt:  RIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQR

AT1G16430.1 Surfeit locus protein 5 subunit 22 of Mediator complex6.2e-5575.34Show/hide
Query:  MNK--GIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLN
        MNK  G GGG+GPTAAAA AA QKQK LLQRV+TDI ++VDNF  +VNV+RV+DPP++NSQE++MMEMRA+R+VQAADSLLKLVSELKQTAIFSGFASLN
Subjt:  MNK--GIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLN

Query:  DHVEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRT
        DHVEQRI EF+Q+A++T+RLL+RI ++A++SLKELESHYYSS QR+
Subjt:  DHVEQRIVEFNQQAQQTDRLLSRIGEEAASSLKELESHYYSSTQRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAAGGCATCGGTGGTGGAACTGGCCCCACTGCAGCGGCTGCGACGGCGGCAGCTCAGAAGCAGAAAATGCTTCTCCAGAGAGTGGAAACTGATATAGCCAATAT
TGTTGACAATTTCACTCACCTTGTCAACGTCTCTAGAGTGAACGATCCACCAGTTAGAAATTCACAGGAATCTTTCATGATGGAAATGCGTGCGGCCAGAATGGTTCAGG
CAGCTGATTCTCTGCTGAAGTTGGTTTCAGAACTTAAGCAGACAGCAATCTTTTCTGGATTCGCTTCACTAAATGATCATGTAGAGCAAAGAATTGTTGAATTCAATCAG
CAAGCACAGCAGACCGACCGTCTTTTATCTAGAATTGGTGAAGAAGCTGCCTCCAGTTTGAAGGAGCTTGAATCTCATTATTATTCTTCAACACAGAGAACTGATCAGAA
GACGTGA
mRNA sequenceShow/hide mRNA sequence
AACAGCCCATTAACCACTCATATCTAAGCCCATCTCTACTATTGAATTCCAATGCTTGTCTAGGGCTTCCTCAACCTCTGTGTCGTGTTGCTTCTTTGTAACGCCGGCAG
CGCCCATAAGCTCCGACCATCAACGACACGACCGCACCTTCCACTAACTGCCACCGACGACGTTCTACCAGCGTTTTTCTCCATTTTTGTCGACGTTCGGTAAAGACCCA
CTCTCATTCAACCTCAAATTTGAGTTTCCCACTTCTTAATTGAGCTGATTCAATTCCCACTTCTTTTTCTATTATTATGAACAAAGGCATCGGTGGTGGAACTGGCCCCA
CTGCAGCGGCTGCGACGGCGGCAGCTCAGAAGCAGAAAATGCTTCTCCAGAGAGTGGAAACTGATATAGCCAATATTGTTGACAATTTCACTCACCTTGTCAACGTCTCT
AGAGTGAACGATCCACCAGTTAGAAATTCACAGGAATCTTTCATGATGGAAATGCGTGCGGCCAGAATGGTTCAGGCAGCTGATTCTCTGCTGAAGTTGGTTTCAGAACT
TAAGCAGACAGCAATCTTTTCTGGATTCGCTTCACTAAATGATCATGTAGAGCAAAGAATTGTTGAATTCAATCAGCAAGCACAGCAGACCGACCGTCTTTTATCTAGAA
TTGGTGAAGAAGCTGCCTCCAGTTTGAAGGAGCTTGAATCTCATTATTATTCTTCAACACAGAGAACTGATCAGAAGACGTGATTTAAAAGTGGTAAATTAAGTAAATTA
ACGATGTAATACGATTGGATTCTAAACTCAATTGCTTGCTAACATGGATAATGAAACGTAATTGACCA
Protein sequenceShow/hide protein sequence
MNKGIGGGTGPTAAAATAAAQKQKMLLQRVETDIANIVDNFTHLVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQRIVEFNQ
QAQQTDRLLSRIGEEAASSLKELESHYYSSTQRTDQKT