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PI0011103 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011103
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr10:325929..326327
RNA-Seq ExpressionPI0011103
SyntenyPI0011103
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34145.1 hypothetical protein [Cucumis melo subsp. melo]6.4e-3775.21Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV
        RGR +STSSKG R SSS N  PSPMSA QYTMDLGFT VTRS++R S I I SPTESSTPPRPS NL+ PSGG+ QMRPPASP SN ESSTPPTTYS+AV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV

Query:  APEKRFIPRPEIKTYFK
          +KRF+PRPEIK+YF+
Subjt:  APEKRFIPRPEIKTYFK

KAA0026217.1 hypothetical protein E6C27_scaffold19G001920 [Cucumis melo var. makuwa]1.3e-3774.36Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV
        RGR +STSSKG+RLSSS N APSPMSADQY MDLGFT VTRS++R SGI I  PTESSTPPRPSANL+ P G + QM+PPASP SN +SSTPPTTYS+AV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV

Query:  APEKRFIPRPEIKTYFK
         P+KRF+PRP+IK YF+
Subjt:  APEKRFIPRPEIKTYFK

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]5.7e-3875.21Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV
        RGR +STSSKG+R  SS N APSP+SADQY MDLGFTTVTR  +RS GI I SPTESSTPPRPS NL+ PS G+ QMRPPASP SN ESSTPPTTYS+AV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV

Query:  APEKRFIPRPEIKTYFK
         P+KRF+PRPEIK+YF+
Subjt:  APEKRFIPRPEIKTYFK

KAA0056175.1 hypothetical protein E6C27_scaffold697G00720 [Cucumis melo var. makuwa]6.4e-3772.65Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV
        RGR +STSSKG+  SSS N A SPM++DQY MDL FTTVTRS++RSS IR  SPTESSTPPRP ANL+ PSGG+ QMRPP SP SN ESSTPPTTYS+AV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV

Query:  APEKRFIPRPEIKTYFK
         P+KRF+PRP+IK+YF+
Subjt:  APEKRFIPRPEIKTYFK

TYK11076.1 hypothetical protein E5676_scaffold73G00620 [Cucumis melo var. makuwa]1.4e-3976.92Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV
        RGR +STSSKG+R SSS N APSPMSADQY MDLGFTTV RS++RSS IR ESPTESSTPPRP ANL+ PSG + QMRPPASP SN ESSTPPTTYS+AV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV

Query:  APEKRFIPRPEIKTYFK
         P+KRF+PRP+IK+YF+
Subjt:  APEKRFIPRPEIKTYFK

TrEMBL top hitse value%identityAlignment
A0A5A7TM80 Putative Retrotransposon protein2.8e-3875.21Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV
        RGR +STSSKG+R  SS N APSP+SADQY MDLGFTTVTR  +RS GI I SPTESSTPPRPS NL+ PS G+ QMRPPASP SN ESSTPPTTYS+AV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV

Query:  APEKRFIPRPEIKTYFK
         P+KRF+PRPEIK+YF+
Subjt:  APEKRFIPRPEIKTYFK

A0A5A7URC1 Uncharacterized protein3.1e-3772.65Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV
        RGR +STSSKG+  SSS N A SPM++DQY MDL FTTVTRS++RSS IR  SPTESSTPPRP ANL+ PSGG+ QMRPP SP SN ESSTPPTTYS+AV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV

Query:  APEKRFIPRPEIKTYFK
         P+KRF+PRP+IK+YF+
Subjt:  APEKRFIPRPEIKTYFK

A0A5D3CKX1 Uncharacterized protein6.6e-4076.92Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV
        RGR +STSSKG+R SSS N APSPMSADQY MDLGFTTV RS++RSS IR ESPTESSTPPRP ANL+ PSG + QMRPPASP SN ESSTPPTTYS+AV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV

Query:  APEKRFIPRPEIKTYFK
         P+KRF+PRP+IK+YF+
Subjt:  APEKRFIPRPEIKTYFK

A0A5D3E4J4 Uncharacterized protein6.2e-3874.36Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV
        RGR +STSSKG+RLSSS N APSPMSADQY MDLGFT VTRS++R SGI I  PTESSTPPRPSANL+ P G + QM+PPASP SN +SSTPPTTYS+AV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV

Query:  APEKRFIPRPEIKTYFK
         P+KRF+PRP+IK YF+
Subjt:  APEKRFIPRPEIKTYFK

E5GCE6 Uncharacterized protein3.1e-3775.21Show/hide
Query:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV
        RGR +STSSKG R SSS N  PSPMSA QYTMDLGFT VTRS++R S I I SPTESSTPPRPS NL+ PSGG+ QMRPPASP SN ESSTPPTTYS+AV
Subjt:  RGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAV

Query:  APEKRFIPRPEIKTYFK
          +KRF+PRPEIK+YF+
Subjt:  APEKRFIPRPEIKTYFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTATTGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACAAAATCCCGCACCCTCACCTATGAGTGCAGATCAATATAC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCTTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTATCAAATTTGGAGTCATCAACTCCTCCCACAACATATTCTGAGGCCGTCGCTCCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTAAAAACAAGTGGCAATCTATGATCCTATCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTATTGTGCGAGGCAGAGGAAGAGTAAGCTCTACCTCTTCAAAGGGCAGTCGCCTATCTTCTTCACAAAATCCCGCACCCTCACCTATGAGTGCAGATCAATATAC
AATGGATTTGGGGTTTACTACGGTAACCCGATCTAAAGCAAGATCGTCCGGCATACGGATTGAATCTCCCACGGAGTCTTCCACTCCACCTAGGCCTTCGGCCAACCTTG
TCCTTCCTTCTGGCGGAATAACTCAAATGAGGCCTCCTGCCTCTCCTTTATCAAATTTGGAGTCATCAACTCCTCCCACAACATATTCTGAGGCCGTCGCTCCAGAAAAA
CGGTTCATACCAAGGCCCGAGATCAAAACCTATTTTAAAAACAAGTGGCAATCTATGATCCTATCATAG
Protein sequenceShow/hide protein sequence
MSIVRGRGRVSSTSSKGSRLSSSQNPAPSPMSADQYTMDLGFTTVTRSKARSSGIRIESPTESSTPPRPSANLVLPSGGITQMRPPASPLSNLESSTPPTTYSEAVAPEK
RFIPRPEIKTYFKNKWQSMILS