CuGenDBv2

Gene ID	PI0011112
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	cyclic phosphodiesterase-like
Genome location	chr04:1479399..1481354
RNA-Seq Expression	PI0011112
Synteny	PI0011112
Gene Ontology terms	GO:0009187 - cyclic nucleotide metabolic process (biological process) GO:0004113 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity (molecular function)
InterPro domains	IPR009097 - Cyclic phosphodiesterase IPR012386 - 2',3'-cyclic-nucleotide 3'-phosphodiesterase

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134643.1 cyclic phosphodiesterase [Cucumis sativus]

2.0e-95

90.62

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Query:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL
        M NPESA IQ  EEET+VYSVWALPPEDVSARIENLM SLRSEFGGPLFEPHITVVGAIRLT EDAL KF TACQG+KAYQATVDHV+TG+FFYQCVFLL
Subjt:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL

Query:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS
        IHPTTEV+ETSSHFC HF FKSSTPYMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSW+KIVEHDLSSS
Subjt:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS

XP_008439703.1 PREDICTED: cyclic phosphodiesterase-like [Cucumis melo]

7.2e-98

93.23

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Query:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL
        M NPESA IQ SEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGP FEPHITVVGAIRLT EDALNKFLTACQG+KAYQATVDHVSTG+FFYQCVFLL
Subjt:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL

Query:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS
        IHPTTEV+ETSSHFC HFGFK+STPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGL+FPITRLAL KTDT+DETLKSWEKIVEHDLSSS
Subjt:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS

XP_022978766.1 cyclic phosphodiesterase-like [Cucurbita maxima]

7.5e-87

82.81

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Query:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL
        MANPES  IQPSE E NVYSVWALPPEDV+ARI  LMNSLRSEFGGP FEPHITVVGAIRLT +DALNKF +AC+GLKAYQATVD VSTG+FFYQCVFLL
Subjt:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL

Query:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS
        IHPTT+V+ETSSH CGHFG+K+STPYMPH+SLLYA+ISDE+KKQAKE+A+KLDEA+NGL FP+TRLAL KTDT DETLKSWEKI E DL SS
Subjt:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS

XP_023543945.1 cyclic phosphodiesterase-like isoform X2 [Cucurbita pepo subsp. pepo]

7.5e-87

83.33

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Query:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL
        MANPES  IQPSE E NVYSVWALPPEDV+ARI  LMNSLRSEFGGP FEPHITVVGAIRLT +DALNKF +AC+GLKAYQATVD VSTG+FFYQCVFLL
Subjt:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL

Query:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS
        IHPTT+V+ETSSH CGHFG+K+STPYMPH+SLLYA+ISDE+KKQAKE+A+KLDEA+NGL FPITRLAL KTDT DETLKSWEKI E DL SS
Subjt:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS

XP_038882567.1 cyclic phosphodiesterase-like [Benincasa hispida]

3.5e-92

88.02

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Query:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL
        MANPESA IQPSE E NVYSVWALPPEDV+ARI+NLMNSLRSEFGGP FEPHITVVGAIRLTP+DALNKF +ACQGLKAYQATVDHVSTG+FFYQCVFLL
Subjt:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL

Query:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS
        IH TTEV+ETSSH CGHFG+K+STPYMPHMSLLYA+ISDEKKKQAK IADKLDEAVNGL+FPITRLAL KTDT DETLKSWEKI EH+L SS
Subjt:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLS9 Uncharacterized protein

9.5e-96

90.62

Show/hide

Query:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL
        M NPESA IQ  EEET+VYSVWALPPEDVSARIENLM SLRSEFGGPLFEPHITVVGAIRLT EDAL KF TACQG+KAYQATVDHV+TG+FFYQCVFLL
Subjt:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL

Query:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS
        IHPTTEV+ETSSHFC HF FKSSTPYMPHMSLLY+HISDEK+KQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSW+KIVEHDLSSS
Subjt:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS

A0A1S3AYZ1 cyclic phosphodiesterase-like

3.5e-98

93.23

Show/hide

Query:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL
        M NPESA IQ SEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGP FEPHITVVGAIRLT EDALNKFLTACQG+KAYQATVDHVSTG+FFYQCVFLL
Subjt:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL

Query:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS
        IHPTTEV+ETSSHFC HFGFK+STPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGL+FPITRLAL KTDT+DETLKSWEKIVEHDLSSS
Subjt:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS

A0A5D3CNS3 Cyclic phosphodiesterase-like

2.0e-85

85.79

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Query:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL
        M NPESA IQ SEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGP FEPHITVVGAIRLT EDALNKFLTACQG+KAYQATVDHVSTG+FFYQCVFLL
Subjt:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL

Query:  IHPTTEVLETSSHFCGHFGFKSSTP-----YMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS
        IHPTTEVL   SH        S+ P     YMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGL+FPITRLAL KTDT+DETLKSWEKIVEHDLSSS
Subjt:  IHPTTEVLETSSHFCGHFGFKSSTP-----YMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS

A0A6J1EGC1 cyclic phosphodiesterase-like

4.4e-85

82.81

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Query:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL
        MANPES  IQPSE E NVYSVWALPPEDV ARI  LMNSLRSEFGGP FEPHITVVGAIRLT +DALNKF +AC+GLKAYQATVD VSTG+FFYQCVFLL
Subjt:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL

Query:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS
        IHPTT+V+ETSSH CGHFG+K +TPYMPH+SLLYA+ISDE+KKQAKE+A+KLDEA+NGL FPITRLAL KTDT DETLKSWEKI E DL SS
Subjt:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS

A0A6J1INY2 cyclic phosphodiesterase-like

3.6e-87

82.81

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Query:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL
        MANPES  IQPSE E NVYSVWALPPEDV+ARI  LMNSLRSEFGGP FEPHITVVGAIRLT +DALNKF +AC+GLKAYQATVD VSTG+FFYQCVFLL
Subjt:  MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLL

Query:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS
        IHPTT+V+ETSSH CGHFG+K+STPYMPH+SLLYA+ISDE+KKQAKE+A+KLDEA+NGL FP+TRLAL KTDT DETLKSWEKI E DL SS
Subjt:  IHPTTEVLETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS

SwissProt top hits

e value

%identity

Alignment

O04147 Cyclic phosphodiesterase

2.4e-51

53.93

Show/hide

Query:  EEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLLIHPTTEVLETSS
        E + +VYSVWALP E+   R + LM +LRSEF GP F PH+TV  +  LT ++A   F +AC GLKAY ATVD VSTG+FF+QCVFLL+  T EV+E   
Subjt:  EEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLLIHPTTEVLETSS

Query:  HFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLS
        H   HF   ++TPYMPH+SLLYA +++E+KK A+E A  LD +++GL F + RLALCKTDT D+TL++WE +   +L+
Subjt:  HFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLS

Arabidopsis top hits

e value

%identity

Alignment

AT4G18930.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

1.7e-52

53.93

Show/hide

Query:  EEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLLIHPTTEVLETSS
        E + +VYSVWALP E+   R + LM +LRSEF GP F PH+TV  +  LT ++A   F +AC GLKAY ATVD VSTG+FF+QCVFLL+  T EV+E   
Subjt:  EEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLLIHPTTEVLETSS

Query:  HFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLS
        H   HF   ++TPYMPH+SLLYA +++E+KK A+E A  LD +++GL F + RLALCKTDT D+TL++WE +   +L+
Subjt:  HFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLS

AT4G18940.1 RNA ligase/cyclic nucleotide phosphodiesterase family protein

1.3e-41

44.02

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Query:  QPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAI--RLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLLIHPTTEV
        +  EEE  +Y++WA+P +DV  R++ LM  LRSEFGGP F+PH+T+VG    +LT  +A   F +AC+G K Y ATVD VS G+ ++QC+++ +  T EV
Subjt:  QPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAI--RLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLLIHPTTEV

Query:  LETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSS
        +  + HF  HF   +   Y+PHMS+LY  +++ +KK+A E A  LD +++GL F I R+AL  TD     + SW K+ EH L S
Subjt:  LETSSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSS

Sequences

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CDS sequence

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ATGGCGAACCCAGAATCGGCACTTATCCAACCCTCCGAAGAAGAGACGAACGTGTATTCTGTTTGGGCTCTTCCTCCGGAAGATGTGTCCGCCAGAATCGAGAACCTCAT
GAATAGCCTCAGATCCGAGTTCGGCGGGCCCCTATTCGAGCCACATATCACTGTTGTTGGAGCAATCCGTCTCACCCCTGAGGATGCCCTTAACAAATTCCTCACGGCTT
GTCAGGGGCTTAAGGCTTATCAAGCCACCGTCGATCATGTATCCACCGGCTCCTTCTTCTACCAGTGTGTTTTTCTCCTTATTCATCCTACCACTGAGGTGTTGGAGACC
AGTTCACATTTTTGTGGACATTTTGGTTTCAAAAGCTCTACCCCTTACATGCCGCATATGAGCCTACTGTATGCCCACATATCAGATGAAAAAAAGAAGCAGGCAAAAGA
AATAGCAGACAAGCTCGATGAAGCCGTGAACGGCCTGAGATTCCCAATTACTCGACTTGCACTGTGCAAAACAGACACTGCGGATGAAACTCTGAAGTCCTGGGAGAAAA
TTGTAGAACACGATCTTTCTTCAAGTTAG

mRNA sequence

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GCACTATATTCTCCTCCAAACGACATGTCGACAAACTTCCTTCCTTCCTTGCTTCCTTTCTCAATTTCACTCTTTAACAATTAACTGTAACTACATCCCTCCGCCCAATA
CAATCCTCATCAAAATCAATTCCCCTCTGTCCGATTTCGAAACAGTTTTATTTCAAATCTTCTTCTATTCTCCGCTCCAATGGCGAACCCAGAATCGGCACTTATCCAAC
CCTCCGAAGAAGAGACGAACGTGTATTCTGTTTGGGCTCTTCCTCCGGAAGATGTGTCCGCCAGAATCGAGAACCTCATGAATAGCCTCAGATCCGAGTTCGGCGGGCCC
CTATTCGAGCCACATATCACTGTTGTTGGAGCAATCCGTCTCACCCCTGAGGATGCCCTTAACAAATTCCTCACGGCTTGTCAGGGGCTTAAGGCTTATCAAGCCACCGT
CGATCATGTATCCACCGGCTCCTTCTTCTACCAGTGTGTTTTTCTCCTTATTCATCCTACCACTGAGGTGTTGGAGACCAGTTCACATTTTTGTGGACATTTTGGTTTCA
AAAGCTCTACCCCTTACATGCCGCATATGAGCCTACTGTATGCCCACATATCAGATGAAAAAAAGAAGCAGGCAAAAGAAATAGCAGACAAGCTCGATGAAGCCGTGAAC
GGCCTGAGATTCCCAATTACTCGACTTGCACTGTGCAAAACAGACACTGCGGATGAAACTCTGAAGTCCTGGGAGAAAATTGTAGAACACGATCTTTCTTCAAGTTAGCT
TCTGGTTTTTATCCATGCCCCTTGAAGATCTTGACTATGTTAGTTTACCATATTTGTTTCAACAATGTCTGAAGATCTAGACAGTTTACCATTTTTGTTTCAACAATGTC
TACTCTCCTCTAGACTTCTTAACTGGAAAAAAAATAAATAAATGTCAGCGGAAGGCCTTGTTTGGCAGCTTACCAAGTTTCGTGATTAGATTGTTTCGAACCTTTTTGTT
ATTTAGAAAACAAGTTTGTAAAATAAACTTCATTTTTCATATATGAAACCAAAGAATTACCACTAAAA

Protein sequence

Show/hide protein sequence

MANPESALIQPSEEETNVYSVWALPPEDVSARIENLMNSLRSEFGGPLFEPHITVVGAIRLTPEDALNKFLTACQGLKAYQATVDHVSTGSFFYQCVFLLIHPTTEVLET
SSHFCGHFGFKSSTPYMPHMSLLYAHISDEKKKQAKEIADKLDEAVNGLRFPITRLALCKTDTADETLKSWEKIVEHDLSSS

PI0011112 (gene) of Melon (PI 482460) v1 genome