CuGenDBv2

Gene ID	PI0011210
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	damaged DNA binding;exodeoxyribonuclease IIIs
Genome location	chr08:13300138..13303369
RNA-Seq Expression	PI0011210
Synteny	PI0011210
Gene Ontology terms	GO:0000077 - DNA damage checkpoint (biological process) GO:0006281 - DNA repair (biological process) GO:0030896 - checkpoint clamp complex (cellular component)
InterPro domains	IPR003021 - Rad1/Rec1/Rad17

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004149108.1 uncharacterized protein LOC101219270 [Cucumis sativus]

3.3e-166

97.34

Show/hide

Query:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDL+C FDNVQGLVDAFT+VRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
        LSTIELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN
        FMYYANTDLLISFHCD+QVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSV KPS+SHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN

Query:  D
        D
Subjt:  D

XP_008442021.1 PREDICTED: uncharacterized protein LOC103486009 [Cucumis melo]

1.5e-166

98.01

Show/hide

Query:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVC FDNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
        LSTIELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN
        FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPS+SHTHIDSAGYQQPSRIAFIEFFVKPEEDS N
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN

Query:  D
        D
Subjt:  D

XP_022996322.1 uncharacterized protein LOC111491589 isoform X1 [Cucurbita maxima]

6.7e-159

93.02

Show/hide

Query:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVC+ DNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
        LS +E+KYPGPDMQLLLKSVDSLDACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV I+L+PSPPSVTFK EGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PS+SH HIDSAGYQQ SRIAFIEFFVKPEED+ +
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN

Query:  D
        D
Subjt:  D

XP_023534468.1 uncharacterized protein LOC111796019 isoform X1 [Cucurbita pepo subsp. pepo]

3.0e-159

92.69

Show/hide

Query:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVC+ DNVQGLVDAFTAVRWKRHQDAVIELSEHG+VLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
        LS +E+KYPGPDMQLLLKSVDS DACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV I+L+PSPPSVTFK EGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PS+SH HIDSAGYQQPSRIAFIEFFVKPEED+ +
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN

Query:  D
        D
Subjt:  D

XP_038882945.1 uncharacterized protein LOC120074039 isoform X1 [Benincasa hispida]

2.5e-161

95.35

Show/hide

Query:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVC  DNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
        LSTIE+KYPGPDMQLL KSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQP PPSVTFK EGHG+LQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN
        FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVAKPS+SH HIDSAGYQQPSRIAFIEFFVKP ED+ N
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN

Query:  D
        D
Subjt:  D

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L199 Uncharacterized protein

1.6e-166

97.34

Show/hide

Query:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDL+C FDNVQGLVDAFT+VRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
        LSTIELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN
        FMYYANTDLLISFHCD+QVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSV KPS+SHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN

Query:  D
        D
Subjt:  D

A0A1S3B4R8 uncharacterized protein LOC103486009

7.2e-167

98.01

Show/hide

Query:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVC FDNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
        LSTIELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN
        FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPS+SHTHIDSAGYQQPSRIAFIEFFVKPEEDS N
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN

Query:  D
        D
Subjt:  D

A0A5D3DUR6 Syntaxin-22-like protein

7.2e-167

98.01

Show/hide

Query:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVC FDNVQGLVDAFTAVRWKRHQDA+IELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
        LSTIELKYPGPDMQLLLK+VDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN
        FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPS+SHTHIDSAGYQQPSRIAFIEFFVKPEEDS N
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN

Query:  D
        D
Subjt:  D

A0A6J1GZY3 uncharacterized protein LOC111459157 isoform X1

5.5e-159

92.36

Show/hide

Query:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD ++PDLVC+ DNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
        LS +E+KYPGPDMQLLLKSVDS DACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV I+L+PSPPSVTFK EGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PS+SH HIDSAGYQQPSRIAFIEFFVKPEED+ +
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN

Query:  D
        D
Subjt:  D

A0A6J1K1L0 uncharacterized protein LOC111491589 isoform X1

3.2e-159

93.02

Show/hide

Query:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
        MSSSAVD EAPDLVC+ DNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRE+FIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR
Subjt:  MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGR

Query:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD
        LS +E+KYPGPDMQLLLKSVDSLDACIYAEIRTRIP+TISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSV I+L+PSPPSVTFK EGHGDLQVD
Subjt:  LSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVD

Query:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN
        FMYYANTDLLISFHCDR VSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGG+LKVQHLVSVA+PS+SH HIDSAGYQQ SRIAFIEFFVKPEED+ +
Subjt:  FMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPN

Query:  D
        D
Subjt:  D

SwissProt top hits

e value

%identity

Alignment

Q9QWZ1 Cell cycle checkpoint protein RAD1

7.8e-17

Show/hide

Query:  LVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFS---VPGRLSTIELKYP
        LV   DNV+ L     A+ ++ H  A    +++GI + VE + C+QA  ++Q ++F  +    ++   F ++L I +D L+ F     PG L+ + + Y 
Subjt:  LVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFS---VPGRLSTIELKYP

Query:  GPDMQLLLKSVDSLDACIYAEIRTRIP-DTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGH-GDLQVDFMYYANT
        G    L+L  ++        +I T+ P +T+ +D+    + +      ++S  L+EA  +L+  G  + I + P  P       G+ G+  +D  Y  ++
Subjt:  GPDMQLLLKSVDSLDACIYAEIRTRIP-DTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGH-GDLQVDFMYYANT

Query:  DLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSP
        DL+ +FHCD+    RYK   L+ +T  +  S     + S  T  R G L +Q+++                  +  +I F+E++  P+E+ P
Subjt:  DLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSP

Arabidopsis top hits

e value

%identity

Alignment

AT4G17760.1 damaged DNA binding;exodeoxyribonuclease IIIs

1.9e-135

75.93

Show/hide

Query:  SSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL
        SS A++ + PDL+C+ DNVQG+VDA T VRWKRHQDA++ELSEHGIVLIVEESGCLQAKVYLQRELF +YEY AQ RPRFG+SLG+ VD LNTFS PG  
Subjt:  SSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRL

Query:  STIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVDF
        +TIE+KYPGPDM+LLLKSVD+L++CIY+EIRTRIP+T++WDYNFE AG +PL+FTVKSAALKEAIDDLEWPGSSV I+LQ  PP V F+ EGHGDLQ+DF
Subjt:  STIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVDF

Query:  MYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEE
        MYYANTDLL++FHCD +VSY YKYKFL+ATT+NIP +V+RENRGSKLTIGRGG+LKVQHLVSV+K  +    ++SAGYQ PSRIA+IEFFVKPEE
Subjt:  MYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEE

AT4G17760.2 damaged DNA binding;exodeoxyribonuclease IIIs

4.3e-111

76.64

Show/hide

Query:  ESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSP
        ESGCLQAKVYLQRELF +YEY AQ RPRFG+SLG+ VD LNTFS PG  +TIE+KYPGPDM+LLLKSVD+L++CIY+EIRTRIP+T++WDYNFE AG +P
Subjt:  ESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPGPDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSP

Query:  LSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGR
        L+FTVKSAALKEAIDDLEWPGSSV I+LQ  PP V F+ EGHGDLQ+DFMYYANTDLL++FHCD +VSY YKYKFL+ATT+NIP +V+RENRGSKLTIGR
Subjt:  LSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDRQVSYRYKYKFLRATTSNIPSSVIRENRGSKLTIGR

Query:  GGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEE
        GG+LKVQHLVSV+K  +    ++SAGYQ PSRIA+IEFFVKPEE
Subjt:  GGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEE

Sequences

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CDS sequence

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ATGAGCTCGTCGGCGGTGGACATGGAGGCGCCCGATCTTGTTTGCCGCTTTGACAACGTCCAAGGTCTGGTGGATGCCTTCACCGCCGTTCGATGGAAACGCCATCAGGA
CGCCGTAATCGAACTATCGGAACATGGCATCGTTTTGATCGTTGAAGAATCCGGCTGTCTTCAGGCCAAAGTGTATCTCCAGCGTGAGCTTTTCATTCGCTATGAATACA
GTGCACAAGCTCGGCCCAGATTTGGAGTGAGCTTAGGGATTTTTGTTGATAGTTTGAATACATTTTCTGTTCCTGGACGTTTAAGCACCATTGAACTCAAATACCCAGGA
CCTGACATGCAACTTCTTCTCAAGTCGGTTGATTCATTAGATGCTTGCATTTATGCGGAGATCAGAACCAGAATCCCAGATACGATCTCATGGGATTACAATTTTGAACC
TGCTGGAAGCAGCCCACTTAGTTTCACCGTCAAGTCTGCAGCACTGAAGGAAGCTATCGATGATCTTGAATGGCCTGGATCAAGTGTCCTTATAGCTCTACAACCGTCTC
CCCCTTCTGTCACCTTCAAAGCTGAAGGCCATGGAGACTTGCAGGTGGATTTCATGTATTATGCAAATACCGATCTTTTGATCTCGTTCCATTGCGATCGACAAGTATCC
TACAGGTACAAGTACAAGTTTCTCCGTGCGACGACTTCGAACATACCAAGCAGTGTGATAAGAGAAAATAGAGGAAGCAAATTGACTATTGGGAGAGGAGGATTGCTAAA
AGTTCAACACCTTGTTTCTGTTGCAAAACCATCAAGTTCACATACACATATAGATTCTGCTGGCTATCAGCAACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAAC
CCGAAGAAGATTCCCCAAATGATTAG

mRNA sequence

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GAAAATTTTCCCCGGCAAAATTTGGCGGGAAACCCGAAATCATGAGCTCGTCGGCGGTGGACATGGAGGCGCCCGATCTTGTTTGCCGCTTTGACAACGTCCAAGGTCTG
GTGGATGCCTTCACCGCCGTTCGATGGAAACGCCATCAGGACGCCGTAATCGAACTATCGGAACATGGCATCGTTTTGATCGTTGAAGAATCCGGCTGTCTTCAGGCCAA
AGTGTATCTCCAGCGTGAGCTTTTCATTCGCTATGAATACAGTGCACAAGCTCGGCCCAGATTTGGAGTGAGCTTAGGGATTTTTGTTGATAGTTTGAATACATTTTCTG
TTCCTGGACGTTTAAGCACCATTGAACTCAAATACCCAGGACCTGACATGCAACTTCTTCTCAAGTCGGTTGATTCATTAGATGCTTGCATTTATGCGGAGATCAGAACC
AGAATCCCAGATACGATCTCATGGGATTACAATTTTGAACCTGCTGGAAGCAGCCCACTTAGTTTCACCGTCAAGTCTGCAGCACTGAAGGAAGCTATCGATGATCTTGA
ATGGCCTGGATCAAGTGTCCTTATAGCTCTACAACCGTCTCCCCCTTCTGTCACCTTCAAAGCTGAAGGCCATGGAGACTTGCAGGTGGATTTCATGTATTATGCAAATA
CCGATCTTTTGATCTCGTTCCATTGCGATCGACAAGTATCCTACAGGTACAAGTACAAGTTTCTCCGTGCGACGACTTCGAACATACCAAGCAGTGTGATAAGAGAAAAT
AGAGGAAGCAAATTGACTATTGGGAGAGGAGGATTGCTAAAAGTTCAACACCTTGTTTCTGTTGCAAAACCATCAAGTTCACATACACATATAGATTCTGCTGGCTATCA
GCAACCCAGTAGAATTGCTTTCATTGAGTTCTTTGTAAAACCCGAAGAAGATTCCCCAAATGATTAGTAGACTTTTTTCAAATATTATTTTTTGAAACATTACATTGCAT
TTGGAGTGAAGTCGAACTTGCGACTTACTAGAGGAAGTAGAGATGTCTTAACTGTACAAGCCTTCTCAAATATTTGGCTCTTCGTTTGCCTTAGCAATG

Protein sequence

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MSSSAVDMEAPDLVCRFDNVQGLVDAFTAVRWKRHQDAVIELSEHGIVLIVEESGCLQAKVYLQRELFIRYEYSAQARPRFGVSLGIFVDSLNTFSVPGRLSTIELKYPG
PDMQLLLKSVDSLDACIYAEIRTRIPDTISWDYNFEPAGSSPLSFTVKSAALKEAIDDLEWPGSSVLIALQPSPPSVTFKAEGHGDLQVDFMYYANTDLLISFHCDRQVS
YRYKYKFLRATTSNIPSSVIRENRGSKLTIGRGGLLKVQHLVSVAKPSSSHTHIDSAGYQQPSRIAFIEFFVKPEEDSPND

PI0011210 (gene) of Melon (PI 482460) v1 genome