; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0011212 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0011212
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr04:10804429..10804593
RNA-Seq ExpressionPI0011212
SyntenyPI0011212
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048281.1 retrotransposon protein [Cucumis melo var. makuwa]2.4e-1472.22Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF +WELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]8.1e-1574.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
KAA0065286.1 retrotransposon protein [Cucumis melo var. makuwa]2.4e-1472.22Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF +WELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-1474.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.4e-1474.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
TrEMBL top hitse value%identityAlignment
A0A5A7TWH8 Retrotransposon protein1.1e-1472.22Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF +WELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
A0A5A7UIM7 Putative nuclease HARBI13.9e-1574.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
A0A5A7VJX3 Retrotransposon protein6.7e-1574.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
A0A5D3BL48 Putative nuclease HARBI16.7e-1574.07Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF DWELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
A0A5D3D9Z3 Retrotransposon protein1.1e-1472.22Show/hide
Query:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
        MTN DI D +DE DST+ATT  +DIHYIETSN WSQWRD+LA+ MF +WELRNQ
Subjt:  MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAACGCTGACATACCAGACGAAGTTGATGAGGGTGACTCAACGTATGCCACTACTGGTGGGGAGGACATACATTATATAGAGACGTCCAACGCATGGAGTCAATG
GAGGGACGAGCTTGCAAAAAGAATGTTTTGTGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAACGCTGACATACCAGACGAAGTTGATGAGGGTGACTCAACGTATGCCACTACTGGTGGGGAGGACATACATTATATAGAGACGTCCAACGCATGGAGTCAATG
GAGGGACGAGCTTGCAAAAAGAATGTTTTGTGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNADIPDEVDEGDSTYATTGGEDIHYIETSNAWSQWRDELAKRMFCDWELRNQ